FFCP PHASE1:Hg19::chr17:36507827..36507834,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30837 | |EntrezGene=30837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29846 | |HGNC=29846 | ||
|TSSclassifier=strong | |||
|UniProt=O14512 | |UniProt=O14512 | ||
|association_with_transcript=-170bp_to_ENST00000331159,uc002hqa.2,uc002hqb.2,uc010cvl.2_5end | |association_with_transcript=-170bp_to_ENST00000331159,uc002hqa.2,uc002hqb.2,uc010cvl.2_5end | ||
|cluster_id=chr17:36507827..36507834,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_5_at_SOCS7_5end | |description=CAGE_peak_5_at_SOCS7_5end | ||
|id=chr17:36507827..36507834,+ | |id=chr17:36507827..36507834,+ | ||
|ontology_enrichment_celltype=CL:0000511;6.32e-10;1!CL:0002625;6.32e-10;1!CL:0000216;6.32e-10;1 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000511;6.32e-10;1!CL:0002625;6.32e-10;1!CL:0000216;6.32e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.40e-10,1;CL:0002625,3.40e-10,1;CL:0000216,3.40e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.07e-26;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002037;1.15e-13;6!UBERON:0000473;1.25e-10;8!UBERON:0001136;6.32e-10;1!UBERON:0001343;6.32e-10;1!UBERON:0002426;6.32e-10;1!UBERON:0003831;6.32e-10;1!UBERON:0003898;6.32e-10;1!UBERON:0004830;6.32e-10;1!UBERON:0003830;6.32e-10;1!UBERON:0005175;6.32e-10;1!UBERON:0001774;6.32e-10;1!UBERON:0004910;6.32e-10;1!UBERON:0004813;6.32e-10;1!UBERON:0001103;6.32e-10;1!UBERON:0002680;2.75e-09;9!UBERON:0001895;2.75e-09;9!UBERON:0003135;7.32e-08;11!UBERON:0004733;4.40e-07;12!UBERON:0002028;4.40e-07;12 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.82e-14!94;UBERON:0001016!2.82e-14!94;UBERON:0001049!2.95e-14!57;UBERON:0005068!2.95e-14!57;UBERON:0006241!2.95e-14!57;UBERON:0007135!2.95e-14!57;UBERON:0001017!3.00e-14!82;UBERON:0005743!3.53e-13!86;UBERON:0007023!1.52e-12!115;UBERON:0000955!1.79e-12!69;UBERON:0006238!1.79e-12!69;UBERON:0002616!2.82e-12!59;UBERON:0003080!6.49e-10!42;UBERON:0002780!2.51e-09!41;UBERON:0001890!2.51e-09!41;UBERON:0006240!2.51e-09!41;UBERON:0002346!1.05e-08!90;UBERON:0003075!2.24e-08!86;UBERON:0007284!2.24e-08!86;UBERON:0001893!1.03e-07!34;UBERON:0002020!1.47e-07!34;UBERON:0003528!1.47e-07!34;UBERON:0002791!2.42e-07!33;UBERON:0001869!5.74e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.15e-13;6!UBERON:0000473;1.25e-10;8!UBERON:0001136;6.32e-10;1!UBERON:0001343;6.32e-10;1!UBERON:0002426;6.32e-10;1!UBERON:0003831;6.32e-10;1!UBERON:0003898;6.32e-10;1!UBERON:0004830;6.32e-10;1!UBERON:0003830;6.32e-10;1!UBERON:0005175;6.32e-10;1!UBERON:0001774;6.32e-10;1!UBERON:0004910;6.32e-10;1!UBERON:0004813;6.32e-10;1!UBERON:0001103;6.32e-10;1!UBERON:0002680;2.75e-09;9!UBERON:0001895;2.75e-09;9!UBERON:0003135;7.32e-08;11!UBERON:0004733;4.40e-07;12!UBERON:0002028;4.40e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.70e-14,6;UBERON:0006215,8.70e-14,6;UBERON:0000473,9.93e-11,8;UBERON:0001136,3.40e-10,1;UBERON:0001343,3.40e-10,1;UBERON:0004910,3.40e-10,1;UBERON:0005154,3.40e-10,1;UBERON:0005295,3.40e-10,1;UBERON:0004813,3.40e-10,1;UBERON:0005297,3.40e-10,1;UBERON:0005294,3.40e-10,1;UBERON:0010141,3.40e-10,1;UBERON:0005891,3.40e-10,1;UBERON:0002426,3.71e-10,1;UBERON:0003831,3.71e-10,1;UBERON:0003898,3.71e-10,1;UBERON:0004830,3.71e-10,1;UBERON:0003830,3.71e-10,1;UBERON:0005175,3.71e-10,1;UBERON:0001774,3.71e-10,1;UBERON:0001103,3.71e-10,1;UBERON:0010084,3.71e-10,1;UBERON:0002680,2.29e-09,9;UBERON:0001895,2.29e-09,9;UBERON:0010092,2.29e-09,9;UBERON:0003135,6.22e-08,11;UBERON:0004733,3.84e-07,12;UBERON:0002028,3.84e-07,12;UBERON:0007277,3.84e-07,12;UBERON:0000073,3.96e-07,53;UBERON:0002616,3.96e-07,53 | |||
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| ||
|short_description=p5@SOCS7 | |short_description=p5@SOCS7 | ||
}} | }} |
Latest revision as of 18:51, 19 September 2015
Short description: | p5@SOCS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SOCS7_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -170bp_to_ENST00000331159, uc002hqa.2, uc002hqb.2, uc010cvl.2_5end |
EntrezGene: | SOCS7 |
HGNC: | 29846 |
UniProt: | O14512 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.40e-10 | 1 |
seminiferous tubule epithelial cell | 3.40e-10 | 1 |
Sertoli cell | 3.40e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.70e-14 | 6 |
rhombic lip | 8.70e-14 | 6 |
testis | 9.93e-11 | 8 |
mesothelium | 3.40e-10 | 1 |
seminiferous tubule of testis | 3.40e-10 | 1 |
epithelium of male gonad | 3.40e-10 | 1 |
epithelial cord | 3.40e-10 | 1 |
sex cord | 3.40e-10 | 1 |
seminiferous tubule epithelium | 3.40e-10 | 1 |
testis sex cord | 3.40e-10 | 1 |
genital ridge | 3.40e-10 | 1 |
primitive sex cord of indifferent gonad | 3.40e-10 | 1 |
coelomic epithelium | 3.40e-10 | 1 |
chest muscle | 3.71e-10 | 1 |
respiratory system muscle | 3.71e-10 | 1 |
skeletal muscle of trunk | 3.71e-10 | 1 |
respiratory system skeletal muscle | 3.71e-10 | 1 |
thoracic segment muscle | 3.71e-10 | 1 |
chest organ | 3.71e-10 | 1 |
muscle of trunk | 3.71e-10 | 1 |
diaphragm | 3.71e-10 | 1 |
future diaphragm | 3.71e-10 | 1 |
regional part of metencephalon | 2.29e-09 | 9 |
metencephalon | 2.29e-09 | 9 |
future metencephalon | 2.29e-09 | 9 |
male reproductive organ | 6.22e-08 | 11 |
segmental subdivision of hindbrain | 3.84e-07 | 12 |
hindbrain | 3.84e-07 | 12 |
presumptive hindbrain | 3.84e-07 | 12 |
regional part of nervous system | 3.96e-07 | 53 |
regional part of brain | 3.96e-07 | 53 |