FFCP PHASE1:Hg19::chr1:147806883..147806892,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:147806883..147806892,-
|short_description=p1@ENST00000365538
|description=CAGE_peak_1_at_ENST00000365538_5end
|association_with_transcript=0bp_to_ENST00000...") |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000365538_5end | |||
|cluster_id=chr1:147806883..147806892,- | |||
|description=CAGE_peak_1_at_ENST00000365538_5end | |||
|id=chr1:147806883..147806892,- | |||
|ontology_enrichment_celltype=CL:0000012!1.16e-20!682;CL:0000548!2.32e-19!679;CL:0000004!2.32e-19!679;CL:0000255!2.32e-19!679;CL:0000037!3.87e-17!172;CL:0000566!3.87e-17!172;CL:0002032!3.39e-15!165;CL:0000837!3.39e-15!165;CL:0000988!8.45e-15!182;CL:0000003!2.93e-14!722;CL:0000063!1.09e-13!578;CL:0000738!2.37e-13!140;CL:0002087!2.12e-12!119;CL:0002031!3.70e-12!124;CL:0002057!2.22e-09!42;CL:0000860!2.49e-09!45;CL:0000763!1.11e-08!112;CL:0000049!1.11e-08!112;CL:0000542!3.73e-07!53;CL:0000051!3.73e-07!53;CL:0000557!9.31e-07!71;CL:0000838!9.57e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.76e-19,168;CL:0002032,8.28e-17,161;CL:0000837,8.28e-17,161;CL:0000988,2.12e-16,177;CL:0000738,2.87e-14,136;CL:0002087,5.07e-13,115;CL:0002031,1.59e-12,120;CL:0000763,1.07e-09,108;CL:0000049,1.07e-09,108;CL:0000860,9.29e-09,42;CL:0002057,9.29e-09,42;CL:0000542,1.32e-07,53;CL:0000051,1.32e-07,53;CL:0000838,3.79e-07,52;CL:0000557,5.63e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.75e-31!235;DOID:14566!1.20e-30!239;DOID:0050686!7.60e-20!137;DOID:0050687!1.21e-18!143;DOID:305!7.24e-18!106;DOID:2531!1.41e-08!51;DOID:0060083!1.41e-08!51;DOID:1749!3.79e-07!14;DOID:299!5.78e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.74e-08;14!DOID:299;4.59e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.82e-30,235;DOID:14566,2.18e-29,239;DOID:0050686,1.66e-21,137;DOID:0050687,1.95e-17,143;DOID:305,4.75e-17,106;DOID:2531,7.10e-10,51;DOID:0060083,7.10e-10,51;DOID:1749,5.79e-08,14;DOID:299,3.92e-07,25;DOID:1240,8.96e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.75e-08!80;UBERON:0001474!1.02e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.18e-08,76;UBERON:0001474,3.64e-08,82;UBERON:0004765,3.73e-07,90 | |||
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| ||
|short_description=p1@ENST00000365538 | |||
}} | }} |
Latest revision as of 20:56, 27 July 2015
Short description: | p1@ENST00000365538 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000365538_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000365538_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 9.76e-19 | 168 |
hematopoietic oligopotent progenitor cell | 8.28e-17 | 161 |
hematopoietic multipotent progenitor cell | 8.28e-17 | 161 |
hematopoietic cell | 2.12e-16 | 177 |
leukocyte | 2.87e-14 | 136 |
nongranular leukocyte | 5.07e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 1.59e-12 | 120 |
myeloid cell | 1.07e-09 | 108 |
common myeloid progenitor | 1.07e-09 | 108 |
classical monocyte | 9.29e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.29e-09 | 42 |
lymphocyte | 1.32e-07 | 53 |
common lymphoid progenitor | 1.32e-07 | 53 |
lymphoid lineage restricted progenitor cell | 3.79e-07 | 52 |
granulocyte monocyte progenitor cell | 5.63e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.18e-08 | 76 |
bone element | 3.64e-08 | 82 |
skeletal element | 3.73e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.82e-30 | 235 |
disease of cellular proliferation | 2.18e-29 | 239 |
organ system cancer | 1.66e-21 | 137 |
cell type cancer | 1.95e-17 | 143 |
carcinoma | 4.75e-17 | 106 |
hematologic cancer | 7.10e-10 | 51 |
immune system cancer | 7.10e-10 | 51 |
squamous cell carcinoma | 5.79e-08 | 14 |
adenocarcinoma | 3.92e-07 | 25 |
leukemia | 8.96e-07 | 39 |