FFCP PHASE1:Hg19::chr7:45954635..45954662,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=261bp_to_ENST00000460209_5end | |association_with_transcript=261bp_to_ENST00000460209_5end | ||
|cluster_id=chr7:45954635..45954662,- | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_20_at_IGFBP3_5end | |description=CAGE_peak_20_at_IGFBP3_5end | ||
|id=chr7:45954635..45954662,- | |id=chr7:45954635..45954662,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000080!6.23e-17!6;CL:0002127!1.47e-11!1;CL:0000914!1.47e-11!1;CL:0000911!1.47e-11!1;CL:0000814!1.47e-11!1;CL:0002042!1.47e-11!1;CL:0002039!1.47e-11!1;CL:0002040!1.47e-11!1;CL:0002041!1.47e-11!1;CL:0000667!5.74e-08!6;CL:0000058!5.74e-08!6;CL:0000138!5.74e-08!6 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:0060060;2.21e-40;1!DOID:0060061;2.21e-40;1!DOID:8691;2.21e-40;1 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0002331;2.40e-36;10!UBERON:0000178;1.40e-24;15!UBERON:0000179;1.40e-24;15!UBERON:0000463;1.40e-24;15!UBERON:0000478;1.02e-15;24!UBERON:0002390;4.17e-12;32!UBERON:0000922;3.47e-11;49 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060060!3.65e-12!1;DOID:0060061!3.65e-12!1;DOID:8691!3.65e-12!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.21e-40;1!DOID:0060061;2.21e-40;1!DOID:8691;2.21e-40;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.21e-40,1;DOID:0060061,2.21e-40,1;DOID:8691,2.21e-40,1 | |||
|ontology_enrichment_uberon=UBERON:0002370!3.99e-11!4;UBERON:0005058!3.99e-11!4;UBERON:0009113!3.99e-11!4;UBERON:0003295!3.99e-11!4;UBERON:0005562!3.99e-11!4;UBERON:0002331!2.20e-10!10;UBERON:0000358!2.20e-10!10;UBERON:0000307!2.20e-10!10;UBERON:0000091!2.20e-10!10;UBERON:0000087!2.20e-10!10;UBERON:0007806!2.20e-10!10;UBERON:0008780!2.20e-10!10;UBERON:0005728!2.20e-10!10;UBERON:0000974!8.37e-10!10;UBERON:0003351!1.03e-07!6;UBERON:0000178!4.40e-07!15;UBERON:0000179!4.40e-07!15;UBERON:0000463!4.40e-07!15;UBERON:0004177!9.94e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.40e-36;10!UBERON:0000178;1.40e-24;15!UBERON:0000179;1.40e-24;15!UBERON:0000463;1.40e-24;15!UBERON:0000478;1.02e-15;24!UBERON:0002390;4.17e-12;32!UBERON:0000922;3.47e-11;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.40e-36,10;UBERON:0000358,2.40e-36,10;UBERON:0000307,2.40e-36,10;UBERON:0000091,2.40e-36,10;UBERON:0000087,2.40e-36,10;UBERON:0007010,2.40e-36,10;UBERON:0007806,2.40e-36,10;UBERON:0008780,2.40e-36,10;UBERON:0005728,2.40e-36,10;UBERON:0000178,1.40e-24,15;UBERON:0000179,1.40e-24,15;UBERON:0000463,1.40e-24,15;UBERON:0000478,1.02e-15,24 | |||
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|short_description=p20@IGFBP3 | |short_description=p20@IGFBP3 | ||
}} | }} |
Latest revision as of 19:46, 18 September 2015
Short description: | p20@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_IGFBP3_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 261bp_to_ENST00000460209_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.40e-36 | 10 |
blastocyst | 2.40e-36 | 10 |
blastula | 2.40e-36 | 10 |
bilaminar disc | 2.40e-36 | 10 |
inner cell mass | 2.40e-36 | 10 |
cleaving embryo | 2.40e-36 | 10 |
connecting stalk | 2.40e-36 | 10 |
inner cell mass derived epiblast | 2.40e-36 | 10 |
extraembryonic mesoderm | 2.40e-36 | 10 |
blood | 1.40e-24 | 15 |
haemolymphatic fluid | 1.40e-24 | 15 |
organism substance | 1.40e-24 | 15 |
extraembryonic structure | 1.02e-15 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.21e-40 | 1 |
cutaneous T cell lymphoma | 2.21e-40 | 1 |
mycosis fungoides | 2.21e-40 | 1 |