FFCP PHASE1:Hg19::chr8:58890953..58890964,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_ENST00000522992_5end | |association_with_transcript=36bp_to_ENST00000522992_5end | ||
|cluster_id=chr8:58890953..58890964,+ | |||
|coexpression_cluster_id=C4763 | |coexpression_cluster_id=C4763 | ||
|description=CAGE_peak_1_at_ENST00000522992_5end | |description=CAGE_peak_1_at_ENST00000522992_5end | ||
|id=chr8:58890953..58890964,+ | |id=chr8:58890953..58890964,+ | ||
|ontology_enrichment_celltype=CL:0002253;1.29e-13;2!CL:0000054;1.55e-13;2!CL:0000137;1.55e-13;2!CL:0000092;1.55e-13;2!CL:0002178;1.10e-09;3!CL:0002563;1.86e-07;4 | |ontology_enrichment_celltype=CL:0002541!9.60e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002253;1.29e-13;2!CL:0000054;1.55e-13;2!CL:0000137;1.55e-13;2!CL:0000092;1.55e-13;2!CL:0002178;1.10e-09;3!CL:0002563;1.86e-07;4 | ||
|ontology_enrichment_disease=DOID:0060085;1.26e-25;1!DOID:3165;1.26e-25;1!DOID:0060121;1.26e-25;1!DOID:2438;1.26e-25;1!DOID:4418;1.26e-25;1!DOID:3493;7.30e-14;2!DOID:200;1.55e-13;2!DOID:4305;1.55e-13;2!DOID:299;1.24e-09;25!DOID:3119;4.57e-08;14!DOID:0060072;2.04e-07;4 | |ontology_enrichment_celltype_v019_2=CL:0002253,1.37e-13,2;CL:0000054,1.55e-13,2;CL:0000137,1.55e-13,2;CL:0000092,1.55e-13,2;CL:0002178,1.10e-09,3;CL:0002563,1.92e-07,4 | ||
|ontology_enrichment_uberon=UBERON:0001052;1.86e-07;4!UBERON:0001242;1.86e-07;4!UBERON:0001262;1.86e-07;4!UBERON:0004786;1.86e-07;4!UBERON:0004808;1.86e-07;4!UBERON:0001277;1.86e-07;4!UBERON:0000014;2.04e-07;4 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!4.15e-11!235;DOID:14566!9.83e-11!239;DOID:3493!2.66e-10!2;DOID:1036!4.03e-09!8;DOID:8692!4.96e-08!31;DOID:299!6.37e-08!25;DOID:0050686!2.36e-07!137;DOID:2531!5.52e-07!51;DOID:0060083!5.52e-07!51;DOID:0050687!8.19e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.26e-25;1!DOID:3165;1.26e-25;1!DOID:0060121;1.26e-25;1!DOID:2438;1.26e-25;1!DOID:4418;1.26e-25;1!DOID:3493;7.30e-14;2!DOID:200;1.55e-13;2!DOID:4305;1.55e-13;2!DOID:299;1.24e-09;25!DOID:3119;4.57e-08;14!DOID:0060072;2.04e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.26e-25,1;DOID:3165,1.26e-25,1;DOID:0060121,1.26e-25,1;DOID:2438,1.26e-25,1;DOID:4418,1.26e-25,1;DOID:3493,7.30e-14,2;DOID:200,1.55e-13,2;DOID:4305,1.55e-13,2;DOID:299,1.24e-09,25;DOID:3119,4.66e-08,14;DOID:0060072,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000476!9.60e-07!3;UBERON:0000920!9.60e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.86e-07;4!UBERON:0001242;1.86e-07;4!UBERON:0001262;1.86e-07;4!UBERON:0004786;1.86e-07;4!UBERON:0004808;1.86e-07;4!UBERON:0001277;1.86e-07;4!UBERON:0000014;2.04e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.92e-07,4;UBERON:0001242,1.92e-07,4;UBERON:0001262,1.92e-07,4;UBERON:0004786,1.92e-07,4;UBERON:0004808,1.92e-07,4;UBERON:0001277,1.92e-07,4;UBERON:0000014,2.04e-07,4 | |||
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| ||
|short_description=p1@ENST00000522992 | |short_description=p1@ENST00000522992 | ||
}} | }} |
Latest revision as of 19:05, 31 July 2015
Short description: | p1@ENST00000522992 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000522992_5end |
Coexpression cluster: | C4763_rhabdomyosarcoma_adenocarcinoma_signet_acute_leukemia_Wilms_colon |
Association with transcript: | 36bp_to_ENST00000522992_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.37e-13 | 2 |
bone matrix secreting cell | 1.55e-13 | 2 |
osteocyte | 1.55e-13 | 2 |
osteoclast | 1.55e-13 | 2 |
epithelial cell of stomach | 1.10e-09 | 3 |
intestinal epithelial cell | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.92e-07 | 4 |
intestinal mucosa | 1.92e-07 | 4 |
wall of intestine | 1.92e-07 | 4 |
gastrointestinal system mucosa | 1.92e-07 | 4 |
gastrointestinal system epithelium | 1.92e-07 | 4 |
intestinal epithelium | 1.92e-07 | 4 |
zone of skin | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.26e-25 | 1 |
skin benign neoplasm | 1.26e-25 | 1 |
integumentary system benign neoplasm | 1.26e-25 | 1 |
dermis tumor | 1.26e-25 | 1 |
cutaneous fibrous histiocytoma | 1.26e-25 | 1 |
signet ring cell adenocarcinoma | 7.30e-14 | 2 |
giant cell tumor | 1.55e-13 | 2 |
bone giant cell tumor | 1.55e-13 | 2 |
adenocarcinoma | 1.24e-09 | 25 |
gastrointestinal system cancer | 4.66e-08 | 14 |
benign neoplasm | 2.04e-07 | 4 |