FFCP PHASE1:Hg19::chr1:207504605..207504622,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:207504605..207504622,+ | |||
|coexpression_cluster_id=C531 | |coexpression_cluster_id=C531 | ||
|description=CAGE_peak_at_chr1:207504605..207504622,+ | |description=CAGE_peak_at_chr1:207504605..207504622,+ | ||
|id=chr1:207504605..207504622,+ | |id=chr1:207504605..207504622,+ | ||
|ontology_enrichment_celltype=CL:0000860;1.07e-32;33!CL:0002057;1.07e-32;33!CL:0000473;4.78e-21;39!CL:0000234;4.78e-21;39!CL:0000576;2.85e-18;48!CL:0000766;4.30e-13;69!CL:0002087;5.49e-08;104 | |ontology_enrichment_celltype=CL:0000860!2.22e-24!45;CL:0002057!1.01e-22!42;CL:0000766!1.03e-14!76;CL:0000738!6.11e-14!140;CL:0000557!2.13e-13!71;CL:0000839!2.96e-13!70;CL:0002009!3.80e-13!65;CL:0002031!1.32e-12!124;CL:0002194!3.20e-12!63;CL:0000576!3.20e-12!63;CL:0000040!3.20e-12!63;CL:0000559!3.20e-12!63;CL:0002087!2.46e-11!119;CL:0000763!1.25e-10!112;CL:0000049!1.25e-10!112;CL:0002032!1.71e-10!165;CL:0000837!1.71e-10!165;CL:0000037!4.15e-10!172;CL:0000566!4.15e-10!172;CL:0000988!4.38e-09!182 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.07e-32;33!CL:0002057;1.07e-32;33!CL:0000473;4.78e-21;39!CL:0000234;4.78e-21;39!CL:0000576;2.85e-18;48!CL:0000766;4.30e-13;69!CL:0002087;5.49e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.92e-35,42;CL:0002057,1.92e-35,42;CL:0000473,2.73e-29,48;CL:0000234,2.73e-29,48;CL:0000766,5.78e-24,72;CL:0002009,1.40e-22,61;CL:0000557,9.30e-22,67;CL:0000738,3.89e-21,136;CL:0002194,8.54e-21,59;CL:0000576,8.54e-21,59;CL:0000040,8.54e-21,59;CL:0000559,8.54e-21,59;CL:0000839,1.52e-19,66;CL:0002087,1.60e-16,115;CL:0002031,3.52e-16,120;CL:0000763,2.08e-15,108;CL:0000049,2.08e-15,108;CL:0000037,3.99e-14,168;CL:0002032,1.57e-13,161;CL:0000837,1.57e-13,161;CL:0000988,4.52e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.88e-25;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001737;5.00e-12;9!UBERON:0001557;5.00e-12;9!UBERON:0005631;3.22e-07;10!UBERON:0000158;3.22e-07;10 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-10!102;UBERON:0003061!1.02e-10!102;UBERON:0002193!4.45e-10!112;UBERON:0002371!6.11e-10!80;UBERON:0001474!6.77e-09!86;UBERON:0001737!5.36e-07!9;UBERON:0002405!9.88e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.00e-12;9!UBERON:0001557;5.00e-12;9!UBERON:0005631;3.22e-07;10!UBERON:0000158;3.22e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.31e-17,76;UBERON:0002390,2.40e-16,98;UBERON:0003061,2.40e-16,98;UBERON:0001474,2.23e-15,82;UBERON:0002193,2.52e-14,108;UBERON:0002405,6.49e-13,93;UBERON:0004765,6.63e-13,90;UBERON:0001737,4.33e-12,9;UBERON:0001434,6.97e-12,100 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.704772020479856,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.410623275218653,0,0.229240217243854,0,0,0,0,0.619264493264304,0,0,0.369754010166788,0.309868802321207,0.284338464974843,0,2.76997704265939,5.41470008169383,8.02940221648652,0,0,0,4.79814187972564,2.64513160582167,0.727752183563449,7.43772918098191,3.70051099219643,4.95530193432166,8.05538698502021,2.81776777182011,6.14853797710322,10.6871161028352,15.4916324060118,9.47985406160392,7.71793592124679,5.18521685109907,5.16864014223695,15.3041946185451,7.70229664982625,19.1801137739712,0.659702600373432,3.78980949481101,3.40979800426155,31.6328070105157,10.7803192691317,18.0618452208717,11.8086872670669,8.34372669472322,5.86409880703815,9.08099253950053,10.3117738076518,15.5066569846033,1.26753171787165,2.12604299965044,0.209658645508376,1.68492946719743,2.25265339262259,2.25015821375912,0.285012743741249,0.79566670879636,0.547992461293902,0,0,0,0,0.400395987036012,0,0.661044872784862,0.954053754535364,7.39976859842283,5.87237189370939,7.26319133437935,0,0,0,3.73748563216283,1.57204305099666,3.90642848099067,0,1.62961133316795,0.946895611469467,1.94826728407911,0.668462741311041,0,2.43687284041983,2.16643091012012,0.128091319725675,0.130059347559878,0.164437904603676,0,0.289803085735052,4.74517002118593,3.21048993707656,2.09071047609954,0.339928028092699,0.766440987203842,1.03088233644789,2.27717722817553,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0.821127996921047,2.41928091869679,0.802320587350522,10.2825326756787,0,0.670700859703636,0.12786256184353,2.53007406669196,0,1.15877215168659,0,1.45990461090791,0.189069634328136,0,0.43917392846563,0.261958150995425,0,0,0,0,0.398873881556595,0.476981248610684,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,2.20094433552054,0.208994966536811,0.258416759169329,0.35576626268671,0,1.20848795132744,0,0.24406205754817,1.10298924103761,0,0.267899184852239,0,0,0,0,0.366403487860815,5.27121669744253,7.75560528296651,0,1.49091585508596,0.12663051166458,0,1.72101972449288,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0,0.653847612453835,0,0,0.234321431833797,0,0,0.747243402759005,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0.103325781175765,1.18800285728205,0,0,0,0,0,0,0,0,0.150238058906597,0.340296549480063,0.358779271377724,0.640672166455702,0.211931901159562,1.20036438433761,0.309157587715317,1.03056216018252,0,0.506328996723799,0.584622030967192,1.00973509697646,0.368199594569197,0.323292113637624,0,0,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0,0,0.252320850875628,0.72995471815166,0,0,0,0.464367928031979,0.721879481669586,3.66751080123516,5.56329477257736,7.71235295627142,5.73528658208448,3.92182999366331,5.45722423955522,6.0674088672074,6.27908688401107,8.84918460976698,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0.343135620597051,0,0,0.402115889646523,0.0925884451585296,0,0,0,0.115930404975077,0.587043471179108,0.288732895522148,0.462985512576611,0.951270761172991,0,0,0.246217006087397,0.468008530278475,0,0,0,0.283550194484773,0.179117045405697,0.290633938513962,0,0.492663237895943,0.44024217006613,2.90259361757081,0.288239906833923,1.00993946741104,0.126995788584338,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0.258543431515556,0,0,1.86156681609409,1.04007436911366,0,0,0,0.714889968290738,0,0,0.325736184293735,0,0,0.301439377059586,0,0.799783929456456,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0.448340575974109,1.18218456121156,1.07813787429759,7.31555306794566,0,0,0,0,0,26.9642528620986,35.899375104483,12.8468809165171,0.24538298343828,0.500170521059677,0,1.66376689224646,1.42743191037729,1.73472656537328,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,1.86091223510599,1.07857100409308,2.13455115606889,0,0,0.604780586659361,1.48864684691266,0.61384789315225,0.561320188866147,1.53766979106841,0,2.73451665944133,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.362578348774867,0,1.74953878978203,0.34444334449382,0.546273504020151,0.262248829918848,0.451199612907412,0.15403067420883,0,0,0,0,0.680374821106063,0.431831832204279,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0.256450125116389,0,0,0.721287081534056,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0.340906509664404,0,0.495854746082934,0.384380134730212,0,0.4046311234222,0,1.5740617341532,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0.42793898803392,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0,0.565621727814851,0,0,0,0,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0,1.68886108238131,1.97576935775941,0.75894634753143,0,0,0,0,0.470719003883896,0,0,0,0,0,0.764637207142375,1.70894156152249,0.238231775457789,0,0,1.08006287447623,1.58625035258854,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|phase1_expression=0.54503513781167,0.856402095563933,0.704772020479856,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.410623275218653,0,0.229240217243854,0,0,0,0,0.619264493264304,0,0,0.369754010166788,0.309868802321207,0.284338464974843,0,2.76997704265939,5.41470008169383,8.02940221648652,0,0,0,4.79814187972564,2.64513160582167,0.727752183563449,7.43772918098191,3.70051099219643,4.95530193432166,8.05538698502021,2.81776777182011,6.14853797710322,10.6871161028352,15.4916324060118,9.47985406160392,7.71793592124679,5.18521685109907,5.16864014223695,15.3041946185451,7.70229664982625,19.1801137739712,0.659702600373432,3.78980949481101,3.40979800426155,31.6328070105157,10.7803192691317,18.0618452208717,11.8086872670669,8.34372669472322,5.86409880703815,9.08099253950053,10.3117738076518,15.5066569846033,1.26753171787165,2.12604299965044,0.209658645508376,1.68492946719743,2.25265339262259,2.25015821375912,0.285012743741249,0.79566670879636,0.547992461293902,0,0,0,0,0.400395987036012,0,0.661044872784862,0.954053754535364,7.39976859842283,5.87237189370939,7.26319133437935,0,0,0,3.73748563216283,1.57204305099666,3.90642848099067,0,1.62961133316795,0.946895611469467,1.94826728407911,0.668462741311041,0,2.43687284041983,2.16643091012012,0.128091319725675,0.130059347559878,0.164437904603676,0,0.289803085735052,4.74517002118593,3.21048993707656,2.09071047609954,0.339928028092699,0.766440987203842,1.03088233644789,2.27717722817553,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0.821127996921047,2.41928091869679,0.802320587350522,10.2825326756787,0,0.670700859703636,0.12786256184353,2.53007406669196,0,1.15877215168659,0,1.45990461090791,0.189069634328136,0,0.43917392846563,0.261958150995425,0,0,0,0,0.398873881556595,0.476981248610684,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,2.20094433552054,0.208994966536811,0.258416759169329,0.35576626268671,0,1.20848795132744,0,0.24406205754817,1.10298924103761,0,0.267899184852239,0,0,0,0,0.366403487860815,5.27121669744253,7.75560528296651,0,1.49091585508596,0.12663051166458,0,1.72101972449288,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0,0.653847612453835,0,0,0.234321431833797,0,0,0.747243402759005,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0.103325781175765,1.18800285728205,0,0,0,0,0,0,0,0,0.150238058906597,0.340296549480063,0.358779271377724,0.640672166455702,0.211931901159562,1.20036438433761,0.309157587715317,1.03056216018252,0,0.506328996723799,0.584622030967192,1.00973509697646,0.368199594569197,0.323292113637624,0,0,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0,0,0.252320850875628,0.72995471815166,0,0,0,0.464367928031979,0.721879481669586,3.66751080123516,5.56329477257736,7.71235295627142,5.73528658208448,3.92182999366331,5.45722423955522,6.0674088672074,6.27908688401107,8.84918460976698,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0.343135620597051,0,0,0.402115889646523,0.0925884451585296,0,0,0,0.115930404975077,0.587043471179108,0.288732895522148,0.462985512576611,0.951270761172991,0,0,0.246217006087397,0.468008530278475,0,0,0,0.283550194484773,0.179117045405697,0.290633938513962,0,0.492663237895943,0.44024217006613,2.90259361757081,0.288239906833923,1.00993946741104,0.126995788584338,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0.258543431515556,0,0,1.86156681609409,1.04007436911366,0,0,0,0.714889968290738,0,0,0.325736184293735,0,0,0.301439377059586,0,0.799783929456456,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0.448340575974109,1.18218456121156,1.07813787429759,7.31555306794566,0,0,0,0,0,26.9642528620986,35.899375104483,12.8468809165171,0.24538298343828,0.500170521059677,0,1.66376689224646,1.42743191037729,1.73472656537328,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,1.86091223510599,1.07857100409308,2.13455115606889,0,0,0.604780586659361,1.48864684691266,0.61384789315225,0.561320188866147,1.53766979106841,0,2.73451665944133,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.362578348774867,0,1.74953878978203,0.34444334449382,0.546273504020151,0.262248829918848,0.451199612907412,0.15403067420883,0,0,0,0,0.680374821106063,0.431831832204279,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0.256450125116389,0,0,0.721287081534056,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0.340906509664404,0,0.495854746082934,0.384380134730212,0,0.4046311234222,0,1.5740617341532,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0.42793898803392,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0,0.565621727814851,0,0,0,0,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0,1.68886108238131,1.97576935775941,0.75894634753143,0,0,0,0,0.470719003883896,0,0,0,0,0,0.764637207142375,1.70894156152249,0.238231775457789,0,0,1.08006287447623,1.58625035258854,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| ||
|short_description=p@chr1:207504605..207504622,+ | |short_description=p@chr1:207504605..207504622,+ | ||
}} | }} |
Latest revision as of 03:07, 28 July 2015
Short description: | p@chr1:207504605..207504622, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:207504605..207504622, + |
Coexpression cluster: | C531_Neutrophils_Eosinophils_large_CD14_rectal_epitheloid_Hep2 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.92e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.92e-35 | 42 |
defensive cell | 2.73e-29 | 48 |
phagocyte | 2.73e-29 | 48 |
myeloid leukocyte | 5.78e-24 | 72 |
macrophage dendritic cell progenitor | 1.40e-22 | 61 |
granulocyte monocyte progenitor cell | 9.30e-22 | 67 |
leukocyte | 3.89e-21 | 136 |
monopoietic cell | 8.54e-21 | 59 |
monocyte | 8.54e-21 | 59 |
monoblast | 8.54e-21 | 59 |
promonocyte | 8.54e-21 | 59 |
myeloid lineage restricted progenitor cell | 1.52e-19 | 66 |
nongranular leukocyte | 1.60e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 3.52e-16 | 120 |
myeloid cell | 2.08e-15 | 108 |
common myeloid progenitor | 2.08e-15 | 108 |
hematopoietic stem cell | 3.99e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.57e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-13 | 161 |
hematopoietic cell | 4.52e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.31e-17 | 76 |
hematopoietic system | 2.40e-16 | 98 |
blood island | 2.40e-16 | 98 |
bone element | 2.23e-15 | 82 |
hemolymphoid system | 2.52e-14 | 108 |
immune system | 6.49e-13 | 93 |
skeletal element | 6.63e-13 | 90 |
larynx | 4.33e-12 | 9 |
skeletal system | 6.97e-12 | 100 |