FFCP PHASE1:Hg19::chr17:27503783..27503796,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399687 | |EntrezGene=399687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31104 | |HGNC=31104 | ||
|TSSclassifier=strong | |||
|UniProt=Q92614 | |UniProt=Q92614 | ||
|association_with_transcript=-13bp_to_ENST00000533112,uc010csa.1_5end | |association_with_transcript=-13bp_to_ENST00000533112,uc010csa.1_5end | ||
|cluster_id=chr17:27503783..27503796,- | |||
|description=CAGE_peak_8_at_MYO18A_5end | |description=CAGE_peak_8_at_MYO18A_5end | ||
|id=chr17:27503783..27503796,- | |id=chr17:27503783..27503796,- | ||
|ontology_enrichment_celltype=CL:0000791;5.56e-13;18!CL:0000789;5.56e-13;18!CL:0002419;5.56e-13;18!CL:0000084;8.95e-12;25!CL:0000624;3.45e-08;6!CL:0000625;1.08e-07;11 | |ontology_enrichment_celltype=CL:0000066!4.69e-15!254;CL:0000223!5.72e-11!59;CL:0000791!2.62e-08!18;CL:0000789!2.62e-08!18;CL:0002420!2.62e-08!18;CL:0002419!2.62e-08!18;CL:0000790!2.62e-08!18;CL:0000084!4.07e-08!25;CL:0000827!4.07e-08!25;CL:0002076!1.04e-07!43;CL:0000838!2.01e-07!52;CL:0000542!4.49e-07!53;CL:0000051!4.49e-07!53 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;5.56e-13;18!CL:0000789;5.56e-13;18!CL:0002419;5.56e-13;18!CL:0000084;8.95e-12;25!CL:0000624;3.45e-08;6!CL:0000625;1.08e-07;11 | ||
|ontology_enrichment_disease=DOID:1749;1.22e-14;14 | |ontology_enrichment_celltype_v019_2=CL:0000791,1.79e-13,18;CL:0000789,1.79e-13,18;CL:0002420,1.79e-13,18;CL:0002419,1.79e-13,18;CL:0000790,1.79e-13,18;CL:0000084,6.67e-12,25;CL:0000827,6.67e-12,25;CL:0000624,1.58e-08,6;CL:0000838,1.61e-08,52;CL:0000542,2.88e-08,53;CL:0000051,2.88e-08,53;CL:0000625,6.50e-08,11 | ||
|ontology_enrichment_uberon=UBERON:0000344;2.56e-07;20 | |ontology_enrichment_development_v019=CL:0000790;5.56e-13;18 | ||
|ontology_enrichment_disease=DOID:305!1.51e-26!106;DOID:0050687!1.31e-18!143;DOID:162!1.33e-11!235;DOID:14566!6.58e-11!239;DOID:1749!2.77e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.22e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.94e-15,14;DOID:305,1.08e-12,106;DOID:0050687,4.62e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.11e-18!169;UBERON:0000925!4.11e-18!169;UBERON:0006595!4.11e-18!169;UBERON:0001007!2.13e-15!155;UBERON:0001555!2.13e-15!155;UBERON:0007026!2.13e-15!155;UBERON:0004921!1.47e-14!129;UBERON:0004185!1.47e-14!129;UBERON:0000077!3.80e-14!130;UBERON:0001041!2.46e-13!98;UBERON:0001004!2.29e-12!72;UBERON:0000065!3.12e-10!53;UBERON:0005911!4.84e-09!82;UBERON:0000072!2.54e-08!46;UBERON:0008947!6.07e-08!38;UBERON:0003258!6.07e-08!38;UBERON:0002530!5.74e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000344;2.56e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.65e-09,160;UBERON:0000925,2.65e-09,160;UBERON:0006595,2.65e-09,160;UBERON:0001007,5.26e-09,145;UBERON:0001555,5.26e-09,145;UBERON:0007026,5.26e-09,145;UBERON:0000344,2.70e-07,20;UBERON:0004921,5.91e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.236132343941038,0.393364276848904,0,0.309632246632152,0.919421224478927,0.6024118375565,0.739508020333575,0,0.853015394924529,0.293600439334847,0.553995408531877,0.802177789880567,0.434021741431704,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.7703879310245,2.35806457649499,1.64481199199607,0.501559486172034,0,1.4203434172042,0,0.668462741311041,1.47302953737419,1.32920336750173,1.89562704635511,1.15282187753108,1.04047478047903,0.328875809207352,0.276350017785848,0,1.18629250529648,0.802622484269139,2.09071047609954,0.566546713487831,3.06576394881537,1.03088233644789,1.01207876807801,0.95569624297229,2.60433381542567,1.90090408889675,1.20460095262218,1.27986611154418,2.49861453104692,0,0,1.61285394579786,0.534880391567015,1.59306844271079,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.523916301990851,0.364295288292542,0.741568885568859,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,1.36373060295417,1.14721838155602,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,1.18306800039844,1.01150814046861,0.482022059766964,0.992645754591546,0.435758888184812,0.474541238222193,0.404493924480493,0.588664395376038,0.769494313892781,0,0,0,0,3.80265104465493,0,4.72631925345123,0,1.47586126251736,0,0.878002283269004,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0.93733833986777,0.671928512795438,0.567100388969546,0.179117045405697,0,1.53353071666084,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0.591092280605782,1.07813787429759,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.640365346820666,0.303127571446259,3.32870879020994,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0.184161977871793,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0.261435451024901,0,0,0,0.515205058238611,0,0,2.29706215198469,1.30012049207304,1.6068392984416,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,1.53135254993501,0.30347334256665,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,1.08890984861323,1.31801321087491,0.43050537267123,1.68471475667626,0,0,0.507447609232169,0.764637207142375,0.569647187174163,1.19115887728894,0.411362273086194,0,0,1.58625035258854,0.106824071127473,0,0.490080431962063,0,0.432807638929335,0.213425530045242,1.11598390910176,0,0.191505370132367,0,0.324621940274555,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.748562161632879,0.146508179271894,0.121360521749513,0.222886768554957,0,0.47748896947538,0.593929361665277,1.53580351049616,0,0,0,0.16480387422676,1.26675244876796,0.19924798825107,1.65770349318689,0.755798243562828,0.102268682502155,1.96935688737711,0,1.07842021376792,1.79021174675609,0,0,0,0,1.93866549219044,0.278304294485554,0,0,0.262379999988587,0,1.70690172428249,0.508507300585533,0.709163045303809,0,0,0,0,0.844175070377856,0,0.110579259931225,0,0.219385397153973,0.980446171670911,1.53366118706464,0.0769502585037971,0.113942055847001,1.84451123510448,1.97466817701499,3.58536327342627,1.27600463892768,0.274792780205587,1.06606955203727,1.02193298195737,0.156980256395025,0,0.225595660617181,0.19606253431774,0,0,0,0.421996129056054,0.979396848954886,1.13082457147153,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0,0.182454789215666,0.978323094660449,0.485560759068186,1.18375320854817,3.62972148145992,0,0.063186579628488,0.60129367765797,0.103688191397247,0,0,0,0,0,0,0.694238953340524,1.56787835863004,1.65412492502765,1.39781334593624,0,0.677294319023596,0.584714536689484,1.06750094169172,0.290967049465258,0,0,0,0,0.0633107959558787,3.71547627196126,0.561111741760736,0.426905989478705,0.999048047910651,1.29681375438695,0,0.857974989309823,3.02515075775114,0.124252535565433,1.64985824231757,0,0,0.407992870545287,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0.599037001496973,0,0,0.201550417460179,0,3.49487848582361,0.393915911536118,0.164831716762333,0.471824806979294,0.885847333632739,0,0.795229689809303,0,0.321506296930038,0,0.415440338029185,0.2249738915515,0,0.182248669974074,0.335434687599266,0.86686278029118,0.891727998294968,0.316801009558219,0,0.767660789277781,0,0.662091970365432,0,0,0,0,0,0,0,0,1.46552233678082,1.32506888912221,0,0.13223260174269,1.88195521672762,0.7048150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| ||
|short_description=p8@MYO18A | |short_description=p8@MYO18A | ||
}} | }} |
Latest revision as of 08:19, 19 September 2015
Short description: | p8@MYO18A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MYO18A_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000533112, uc010csa.1_5end |
EntrezGene: | MYO18A |
HGNC: | 31104 |
UniProt: | Q92614 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.79e-13 | 18 |
alpha-beta T cell | 1.79e-13 | 18 |
immature T cell | 1.79e-13 | 18 |
mature T cell | 1.79e-13 | 18 |
immature alpha-beta T cell | 1.79e-13 | 18 |
T cell | 6.67e-12 | 25 |
pro-T cell | 6.67e-12 | 25 |
CD4-positive, alpha-beta T cell | 1.58e-08 | 6 |
lymphoid lineage restricted progenitor cell | 1.61e-08 | 52 |
lymphocyte | 2.88e-08 | 53 |
common lymphoid progenitor | 2.88e-08 | 53 |
CD8-positive, alpha-beta T cell | 6.50e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.65e-09 | 160 |
endoderm | 2.65e-09 | 160 |
presumptive endoderm | 2.65e-09 | 160 |
digestive system | 5.26e-09 | 145 |
digestive tract | 5.26e-09 | 145 |
primitive gut | 5.26e-09 | 145 |
mucosa | 2.70e-07 | 20 |
subdivision of digestive tract | 5.91e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.94e-15 | 14 |
carcinoma | 1.08e-12 | 106 |
cell type cancer | 4.62e-10 | 143 |