FFCP PHASE1:Hg19::chr11:17035497..17035508,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=8385 | |HGNC=8385 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-36bp_to_ENST00000530490_5end | |association_with_transcript=-36bp_to_ENST00000530490_5end | ||
|cluster_id=chr11:17035497..17035508,+ | |||
|description=CAGE_peak_3_at_OR7E14P_5end | |description=CAGE_peak_3_at_OR7E14P_5end | ||
|id=chr11:17035497..17035508,+ | |id=chr11:17035497..17035508,+ | ||
|ontology_enrichment_celltype=CL:1000507;7.17e-25;10!CL:1000494;7.17e-25;10!CL:1000449;4.49e-20;15!CL:1000497;1.83e-17;17!CL:0002518;1.83e-17;17!CL:0002681;1.47e-16;12!CL:0002584;1.47e-16;12!CL:0000239;3.84e-10;3!CL:1000615;3.84e-10;3!CL:0002306;3.84e-10;3!CL:0000182;3.37e-09;12!CL:0000650;8.64e-08;2!CL:1000500;8.64e-08;2!CL:1000618;8.64e-08;2!CL:1001318;8.64e-08;2!CL:0002173;8.64e-08;2!CL:0000123;1.07e-07;2!CL:0000242;1.07e-07;2 | |ontology_enrichment_celltype=CL:0000066!6.26e-16!254 | ||
| | |ontology_enrichment_celltype_v019=CL:1000507;7.17e-25;10!CL:1000494;7.17e-25;10!CL:1000449;4.49e-20;15!CL:1000497;1.83e-17;17!CL:0002518;1.83e-17;17!CL:0002681;1.47e-16;12!CL:0002584;1.47e-16;12!CL:0000239;3.84e-10;3!CL:1000615;3.84e-10;3!CL:0002306;3.84e-10;3!CL:0000182;3.37e-09;12!CL:0000650;8.64e-08;2!CL:1000500;8.64e-08;2!CL:1000618;8.64e-08;2!CL:1001318;8.64e-08;2!CL:0002173;8.64e-08;2!CL:0000123;1.07e-07;2!CL:0000242;1.07e-07;2 | ||
|ontology_enrichment_disease=DOID:3493;2.85e-08;2 | |ontology_enrichment_celltype_v019_2=CL:1000507,1.63e-25,10;CL:1000494,1.63e-25,10;CL:1000449,1.53e-20,15;CL:1000497,7.15e-18,17;CL:0002518,7.15e-18,17;CL:0002681,7.56e-17,12;CL:0002584,7.56e-17,12;CL:0000239,1.34e-10,3;CL:1000615,1.34e-10,3;CL:0002306,1.34e-10,3;CL:0000182,2.44e-09,12;CL:0000066,1.46e-08,253;CL:0000650,9.82e-08,2;CL:1000500,9.82e-08,2;CL:1000618,9.82e-08,2;CL:1001318,9.82e-08,2;CL:0002173,9.82e-08,2;CL:0000242,9.82e-08,2 | ||
|ontology_enrichment_uberon=UBERON:0004211;7.17e-25;10!UBERON:0009773;7.17e-25;10!UBERON:0001231;7.17e-25;10!UBERON:0004810;7.17e-25;10!UBERON:0006555;4.49e-20;15!UBERON:0004819;4.49e-20;15!UBERON:0001285;4.49e-20;15!UBERON:0007684;4.49e-20;15!UBERON:0000489;6.18e-19;29!UBERON:0006554;3.43e-18;30!UBERON:0001008;3.43e-18;30!UBERON:0002113;3.11e-17;24!UBERON:0011143;3.11e-17;24!UBERON:0001225;1.47e-16;12!UBERON:0008987;1.47e-16;12!UBERON:0001851;5.81e-13;15!UBERON:0000353;5.81e-13;15!UBERON:0005172;1.65e-12;52!UBERON:0005173;1.65e-12;52!UBERON:0006853;3.84e-10;3!UBERON:0007685;3.84e-10;3!UBERON:0004134;3.84e-10;3!UBERON:0002417;1.45e-08;58!UBERON:0000916;1.45e-08;58!UBERON:0005177;2.85e-08;99!UBERON:0003567;8.64e-08;2!UBERON:0003838;8.64e-08;2!UBERON:0003586;8.64e-08;2!UBERON:0005169;8.64e-08;2!UBERON:0002321;8.64e-08;2!UBERON:0005215;8.64e-08;2!UBERON:0002303;8.64e-08;2!UBERON:0002319;8.64e-08;2!UBERON:0002107;2.05e-07;19!UBERON:0006925;2.05e-07;19!UBERON:0001255;2.60e-07;2!UBERON:0001556;2.60e-07;2!UBERON:0002423;5.58e-07;25 | |ontology_enrichment_development_v019=UBERON:0003104;4.62e-10;31!UBERON:0004161;7.86e-10;11!UBERON:0009497;3.23e-08;13 | ||
|ontology_enrichment_disease=DOID:305!1.25e-25!106;DOID:0050687!1.43e-20!143;DOID:299!2.00e-12!25;DOID:162!2.85e-08!235;DOID:14566!1.30e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.85e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.09e-08,2;DOID:305,3.78e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004921!4.89e-12!129;UBERON:0004185!4.89e-12!129;UBERON:0004119!1.23e-11!169;UBERON:0000925!1.23e-11!169;UBERON:0006595!1.23e-11!169;UBERON:0001007!1.87e-11!155;UBERON:0001555!1.87e-11!155;UBERON:0007026!1.87e-11!155;UBERON:0000077!2.08e-11!130;UBERON:0000481!8.07e-11!347;UBERON:0000466!2.90e-10!126;UBERON:0005177!5.55e-10!107;UBERON:0007023!2.68e-09!115;UBERON:0000058!6.23e-09!26;UBERON:0005172!6.67e-09!55;UBERON:0005173!6.67e-09!55;UBERON:0000064!8.28e-09!219;UBERON:0000464!1.44e-08!104;UBERON:0003064!3.31e-08!37;UBERON:0001041!4.02e-08!98;UBERON:0006554!5.92e-08!44;UBERON:0000062!6.09e-08!511;UBERON:0000080!8.47e-08!18;UBERON:0002120!8.47e-08!18;UBERON:0004875!8.47e-08!18;UBERON:0005721!8.47e-08!18;UBERON:0005754!8.47e-08!18;UBERON:0007297!8.47e-08!18;UBERON:0009569!9.76e-08!113;UBERON:0003887!1.05e-07!21;UBERON:0004876!1.13e-07!20;UBERON:0002113!1.14e-07!27;UBERON:0003918!1.14e-07!27;UBERON:0005095!1.14e-07!27;UBERON:0007687!1.14e-07!27;UBERON:0001008!1.36e-07!45;UBERON:0000489!1.43e-07!32;UBERON:0006555!4.54e-07!17;UBERON:0005103!4.54e-07!17;UBERON:0000083!4.54e-07!17;UBERON:0009201!4.54e-07!17;UBERON:0004819!4.54e-07!17;UBERON:0006553!4.54e-07!17;UBERON:0003074!4.54e-07!17;UBERON:0003060!4.54e-07!17;UBERON:0002553!4.68e-07!70;UBERON:0002417!4.69e-07!61;UBERON:0000916!4.69e-07!61;UBERON:0000477!5.35e-07!286;UBERON:0003886!6.68e-07!63;UBERON:0000922!7.94e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;7.17e-25;10!UBERON:0009773;7.17e-25;10!UBERON:0001231;7.17e-25;10!UBERON:0004810;7.17e-25;10!UBERON:0006555;4.49e-20;15!UBERON:0004819;4.49e-20;15!UBERON:0001285;4.49e-20;15!UBERON:0007684;4.49e-20;15!UBERON:0000489;6.18e-19;29!UBERON:0006554;3.43e-18;30!UBERON:0001008;3.43e-18;30!UBERON:0002113;3.11e-17;24!UBERON:0011143;3.11e-17;24!UBERON:0001225;1.47e-16;12!UBERON:0008987;1.47e-16;12!UBERON:0001851;5.81e-13;15!UBERON:0000353;5.81e-13;15!UBERON:0005172;1.65e-12;52!UBERON:0005173;1.65e-12;52!UBERON:0006853;3.84e-10;3!UBERON:0007685;3.84e-10;3!UBERON:0004134;3.84e-10;3!UBERON:0002417;1.45e-08;58!UBERON:0000916;1.45e-08;58!UBERON:0005177;2.85e-08;99!UBERON:0003567;8.64e-08;2!UBERON:0003838;8.64e-08;2!UBERON:0003586;8.64e-08;2!UBERON:0005169;8.64e-08;2!UBERON:0002321;8.64e-08;2!UBERON:0005215;8.64e-08;2!UBERON:0002303;8.64e-08;2!UBERON:0002319;8.64e-08;2!UBERON:0002107;2.05e-07;19!UBERON:0006925;2.05e-07;19!UBERON:0001255;2.60e-07;2!UBERON:0001556;2.60e-07;2!UBERON:0002423;5.58e-07;25 | |||
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| ||
|short_description=p3@OR7E14P | |short_description=p3@OR7E14P | ||
}} | }} |
Latest revision as of 23:43, 16 September 2015
Short description: | p3@OR7E14P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_OR7E14P_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENST00000530490_5end |
EntrezGene: | NA |
HGNC: | 8385 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.63e-25 | 10 |
nephron tubule epithelial cell | 1.63e-25 | 10 |
epithelial cell of nephron | 1.53e-20 | 15 |
kidney cell | 7.15e-18 | 17 |
kidney epithelial cell | 7.15e-18 | 17 |
kidney cortical cell | 7.56e-17 | 12 |
renal cortical epithelial cell | 7.56e-17 | 12 |
brush border epithelial cell | 1.34e-10 | 3 |
kidney cortex tubule cell | 1.34e-10 | 3 |
epithelial cell of proximal tubule | 1.34e-10 | 3 |
hepatocyte | 2.44e-09 | 12 |
epithelial cell | 1.46e-08 | 253 |
mesangial cell | 9.82e-08 | 2 |
kidney interstitial cell | 9.82e-08 | 2 |
juxtaglomerular complex cell | 9.82e-08 | 2 |
renal interstitial pericyte | 9.82e-08 | 2 |
extraglomerular mesangial cell | 9.82e-08 | 2 |
Merkel cell | 9.82e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.09e-08 | 2 |
carcinoma | 3.78e-08 | 106 |