FFCP PHASE1:Hg19::chr18:43753974..43754019,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147339 | |EntrezGene=147339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28172 | |HGNC=28172 | ||
|TSSclassifier=strong | |||
|UniProt=Q96B23 | |UniProt=Q96B23 | ||
|association_with_transcript=0bp_to_ENST00000282059,ENST00000321319,NM_001008239,NM_145055,uc002lbw.2,uc002lbx.2_5end | |association_with_transcript=0bp_to_ENST00000282059,ENST00000321319,NM_001008239,NM_145055,uc002lbw.2,uc002lbx.2_5end | ||
|cluster_id=chr18:43753974..43754019,+ | |||
|coexpression_cluster_id=C87 | |coexpression_cluster_id=C87 | ||
|description=CAGE_peak_2_at_C18orf25_5end | |description=CAGE_peak_2_at_C18orf25_5end | ||
|id=chr18:43753974..43754019,+ | |id=chr18:43753974..43754019,+ | ||
|ontology_enrichment_celltype=CL:0000576;1.98e-08;48!CL:0000860;1.42e-07;33!CL:0002057;1.42e-07;33!CL:0000766;4.00e-07;69 | |ontology_enrichment_celltype=CL:0000738!1.25e-17!140;CL:0000766!1.05e-13!76;CL:0000037!1.74e-13!172;CL:0000566!1.74e-13!172;CL:0002031!3.16e-13!124;CL:0002057!3.45e-12!42;CL:0002087!6.25e-12!119;CL:0002032!1.27e-11!165;CL:0000837!1.27e-11!165;CL:0000557!1.88e-11!71;CL:0000860!2.22e-11!45;CL:0000839!5.96e-11!70;CL:0000988!2.64e-10!182;CL:0002009!4.00e-10!65;CL:0002194!1.43e-09!63;CL:0000576!1.43e-09!63;CL:0000040!1.43e-09!63;CL:0000559!1.43e-09!63;CL:0000763!1.95e-09!112;CL:0000049!1.95e-09!112 | ||
| | |ontology_enrichment_celltype_v019=CL:0000576;1.98e-08;48!CL:0000860;1.42e-07;33!CL:0002057;1.42e-07;33!CL:0000766;4.00e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.30e-18,136;CL:0000766,9.93e-15,72;CL:0000037,5.47e-14,168;CL:0002031,7.21e-14,120;CL:0002087,1.54e-12,115;CL:0000557,2.23e-12,67;CL:0000860,3.45e-12,42;CL:0002057,3.45e-12,42;CL:0002032,4.38e-12,161;CL:0000837,4.38e-12,161;CL:0000839,7.48e-12,66;CL:0000988,4.60e-11,177;CL:0002009,5.09e-11,61;CL:0002194,1.91e-10,59;CL:0000576,1.91e-10,59;CL:0000040,1.91e-10,59;CL:0000559,1.91e-10,59;CL:0000763,5.61e-10,108;CL:0000049,5.61e-10,108;CL:0000473,6.07e-10,48;CL:0000234,6.07e-10,48 | |||
|ontology_enrichment_development_v019=CL:0002057;3.06e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-16!115;UBERON:0002390!2.00e-11!102;UBERON:0003061!2.00e-11!102;UBERON:0002193!1.33e-09!112;UBERON:0002371!2.70e-08!80;UBERON:0001474!6.81e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.91e-16,114;UBERON:0002390,4.19e-12,98;UBERON:0003061,4.19e-12,98;UBERON:0002193,3.74e-10,108;UBERON:0002371,6.37e-09,76;UBERON:0002405,1.27e-07,93;UBERON:0001474,2.15e-07,82 | |||
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| ||
|short_description=p2@C18orf25 | |short_description=p2@C18orf25 | ||
}} | }} |
Latest revision as of 15:09, 19 September 2015
Short description: | p2@C18orf25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C18orf25_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | 0bp_to_ENST00000282059, ENST00000321319, NM_001008239, NM_145055, uc002lbw.2, uc002lbx.2_5end |
EntrezGene: | C18orf25 |
HGNC: | 28172 |
UniProt: | Q96B23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.30e-18 | 136 |
myeloid leukocyte | 9.93e-15 | 72 |
hematopoietic stem cell | 5.47e-14 | 168 |
hematopoietic lineage restricted progenitor cell | 7.21e-14 | 120 |
nongranular leukocyte | 1.54e-12 | 115 |
granulocyte monocyte progenitor cell | 2.23e-12 | 67 |
classical monocyte | 3.45e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.45e-12 | 42 |
hematopoietic oligopotent progenitor cell | 4.38e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.38e-12 | 161 |
myeloid lineage restricted progenitor cell | 7.48e-12 | 66 |
hematopoietic cell | 4.60e-11 | 177 |
macrophage dendritic cell progenitor | 5.09e-11 | 61 |
monopoietic cell | 1.91e-10 | 59 |
monocyte | 1.91e-10 | 59 |
monoblast | 1.91e-10 | 59 |
promonocyte | 1.91e-10 | 59 |
myeloid cell | 5.61e-10 | 108 |
common myeloid progenitor | 5.61e-10 | 108 |
defensive cell | 6.07e-10 | 48 |
phagocyte | 6.07e-10 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.91e-16 | 114 |
hematopoietic system | 4.19e-12 | 98 |
blood island | 4.19e-12 | 98 |
hemolymphoid system | 3.74e-10 | 108 |
bone marrow | 6.37e-09 | 76 |
immune system | 1.27e-07 | 93 |
bone element | 2.15e-07 | 82 |