FFCP PHASE1:Hg19::chr8:24241789..24241802,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27299 | |EntrezGene=27299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16299 | |HGNC=16299 | ||
|TSSclassifier=strong | |||
|UniProt=O15204,B7ZAK5,B7Z6V5 | |UniProt=O15204,B7ZAK5,B7Z6V5 | ||
|association_with_transcript=0bp_to_ENST00000256412,ENST00000538205,NM_001145271,NM_001145272,NM_014479,uc003xdz.2,uc010lub.2,uc011lab.1_5end | |association_with_transcript=0bp_to_ENST00000256412,ENST00000538205,NM_001145271,NM_001145272,NM_014479,uc003xdz.2,uc010lub.2,uc011lab.1_5end | ||
|cluster_id=chr8:24241789..24241802,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_4_at_ADAMDEC1_5end | |description=CAGE_peak_4_at_ADAMDEC1_5end | ||
|id=chr8:24241789..24241802,+ | |id=chr8:24241789..24241802,+ | ||
|ontology_enrichment_celltype=CL:0000860;3.01e-57;33!CL:0002057;3.01e-57;33!CL:0000473;1.60e-37;39!CL:0000234;1.60e-37;39!CL:0000576;9.98e-37;48!CL:0000766;1.04e-17;69!CL:0002619;7.66e-14;3!CL:0000946;3.24e-11;1!CL:0000786;3.24e-11;1!CL:0002087;8.67e-11;104!CL:0000763;3.78e-09;100 | |ontology_enrichment_celltype=CL:0002057!2.39e-57!42;CL:0002194!1.43e-54!63;CL:0000576!1.43e-54!63;CL:0000040!1.43e-54!63;CL:0000559!1.43e-54!63;CL:0000860!4.80e-53!45;CL:0002009!1.17e-52!65;CL:0000839!2.37e-48!70;CL:0000557!1.46e-47!71;CL:0000766!6.36e-44!76;CL:0002087!1.35e-41!119;CL:0000738!6.82e-36!140;CL:0002031!2.63e-35!124;CL:0000988!2.67e-30!182;CL:0000763!3.63e-29!112;CL:0000049!3.63e-29!112;CL:0000037!2.11e-27!172;CL:0000566!2.11e-27!172;CL:0002032!8.90e-26!165;CL:0000837!8.90e-26!165;CL:0000080!5.94e-15!6;CL:0002619!4.94e-12!3;CL:0000134!3.82e-08!358;CL:0002320!8.27e-08!365 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.01e-57;33!CL:0002057;3.01e-57;33!CL:0000473;1.60e-37;39!CL:0000234;1.60e-37;39!CL:0000576;9.98e-37;48!CL:0000766;1.04e-17;69!CL:0002619;7.66e-14;3!CL:0000946;3.24e-11;1!CL:0000786;3.24e-11;1!CL:0002087;8.67e-11;104!CL:0000763;3.78e-09;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.32e-48,42;CL:0002057,2.32e-48,42;CL:0002194,4.11e-43,59;CL:0000576,4.11e-43,59;CL:0000040,4.11e-43,59;CL:0000559,4.11e-43,59;CL:0000473,4.86e-42,48;CL:0000234,4.86e-42,48;CL:0002009,1.21e-41,61;CL:0000839,2.37e-38,66;CL:0000557,9.44e-38,67;CL:0000766,5.38e-35,72;CL:0002087,6.53e-24,115;CL:0002031,8.19e-23,120;CL:0000763,1.34e-22,108;CL:0000049,1.34e-22,108;CL:0000738,7.81e-20,136;CL:0000988,1.49e-18,177;CL:0002032,2.38e-16,161;CL:0000837,2.38e-16,161;CL:0000037,1.47e-15,168;CL:0002619,7.42e-14,3;CL:0000946,3.08e-11,1;CL:0000786,3.08e-11,1;CL:0000980,3.08e-11,1 | |||
|ontology_enrichment_development_v019=CL:0002057;3.29e-38;42!CL:0000049;9.13e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.06e-55!102;UBERON:0003061!2.06e-55!102;UBERON:0002193!6.90e-55!112;UBERON:0002371!2.46e-41!80;UBERON:0002405!3.06e-38!115;UBERON:0001474!6.70e-38!86;UBERON:0004765!4.37e-31!101;UBERON:0001434!4.37e-31!101;UBERON:0003081!3.00e-22!216;UBERON:0002204!7.85e-17!167;UBERON:0000178!4.69e-08!15;UBERON:0000179!4.69e-08!15;UBERON:0000463!4.69e-08!15;UBERON:0004177!1.22e-07!7;UBERON:0002384!2.36e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.77e-33,76;UBERON:0002390,8.34e-32,98;UBERON:0003061,8.34e-32,98;UBERON:0001474,1.77e-30,82;UBERON:0002193,1.21e-28,108;UBERON:0004765,1.42e-27,90;UBERON:0002405,1.30e-26,93;UBERON:0001434,1.36e-24,100;UBERON:0003081,5.26e-14,203;UBERON:0002204,9.85e-14,167;UBERON:0000926,5.45e-08,315;UBERON:0004120,5.45e-08,315;UBERON:0006603,5.45e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0.447830948479849,2.59114932815184,4.37878464978117,0,0,0.242584061187816,0.464858073811369,1.23350366406548,0.309706370895104,2.8769239232215,4.09857130446561,3.78371567821736,0.344745680736619,1.29096936716765,0,0.188242339542605,0,0,0.612167784741805,0.320929027076094,0.639337125799041,0.329851300186716,1.19678194572979,0.852449501065388,2.61188314765726,1.70215567407342,1.86846674698672,4.01997864410789,3.12889751052121,3.25783267057675,3.02699751316684,6.62899744777616,3.79754864929061,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0.853460445133014,0.800791974072025,0,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.889563386041866,1.48276726735803,2.08843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26365753956383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,2.62271472604749,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0.447830948479849,2.59114932815184,4.37878464978117,0,0,0.242584061187816,0.464858073811369,1.23350366406548,0.309706370895104,2.8769239232215,4.09857130446561,3.78371567821736,0.344745680736619,1.29096936716765,0,0.188242339542605,0,0,0.612167784741805,0.320929027076094,0.639337125799041,0.329851300186716,1.19678194572979,0.852449501065388,2.61188314765726,1.70215567407342,1.86846674698672,4.01997864410789,3.12889751052121,3.25783267057675,3.02699751316684,6.62899744777616,3.79754864929061,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0.853460445133014,0.800791974072025,0,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.889563386041866,1.48276726735803,2.08843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26365753956383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,2.62271472604749,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p4@ADAMDEC1 | |short_description=p4@ADAMDEC1 | ||
}} | }} |
Latest revision as of 15:11, 17 September 2015
Short description: | p4@ADAMDEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ADAMDEC1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000256412, ENST00000538205, NM_001145271, NM_001145272, NM_014479, uc003xdz.2, uc010lub.2, uc011lab.1_5end |
EntrezGene: | ADAMDEC1 |
HGNC: | 16299 |
UniProt: | O15204B7ZAK5B7Z6V5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.32e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.32e-48 | 42 |
monopoietic cell | 4.11e-43 | 59 |
monocyte | 4.11e-43 | 59 |
monoblast | 4.11e-43 | 59 |
promonocyte | 4.11e-43 | 59 |
defensive cell | 4.86e-42 | 48 |
phagocyte | 4.86e-42 | 48 |
macrophage dendritic cell progenitor | 1.21e-41 | 61 |
myeloid lineage restricted progenitor cell | 2.37e-38 | 66 |
granulocyte monocyte progenitor cell | 9.44e-38 | 67 |
myeloid leukocyte | 5.38e-35 | 72 |
nongranular leukocyte | 6.53e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 8.19e-23 | 120 |
myeloid cell | 1.34e-22 | 108 |
common myeloid progenitor | 1.34e-22 | 108 |
leukocyte | 7.81e-20 | 136 |
hematopoietic cell | 1.49e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.38e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.38e-16 | 161 |
hematopoietic stem cell | 1.47e-15 | 168 |
adult endothelial progenitor cell | 7.42e-14 | 3 |
antibody secreting cell | 3.08e-11 | 1 |
plasma cell | 3.08e-11 | 1 |
plasmablast | 3.08e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.77e-33 | 76 |
hematopoietic system | 8.34e-32 | 98 |
blood island | 8.34e-32 | 98 |
bone element | 1.77e-30 | 82 |
hemolymphoid system | 1.21e-28 | 108 |
skeletal element | 1.42e-27 | 90 |
immune system | 1.30e-26 | 93 |
skeletal system | 1.36e-24 | 100 |
lateral plate mesoderm | 5.26e-14 | 203 |
musculoskeletal system | 9.85e-14 | 167 |
mesoderm | 5.45e-08 | 315 |
mesoderm-derived structure | 5.45e-08 | 315 |
presumptive mesoderm | 5.45e-08 | 315 |