FFCP PHASE1:Hg19::chr7:93941132..93941136,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:93941132..93941136,+ | |||
|description=CAGE_peak_at_chr7:93941132..93941136,+ | |description=CAGE_peak_at_chr7:93941132..93941136,+ | ||
|id=chr7:93941132..93941136,+ | |id=chr7:93941132..93941136,+ | ||
|ontology_enrichment_celltype=CL:0000569;9.78e-25;4!CL:0002570;9.34e-13;8!CL:0000359;1.52e-10;32!CL:0002539;2.86e-10;10!CL:0002580;3.17e-09;3!CL:0002334;3.06e-08;12!CL:0000222;1.42e-07;1!CL:0000511;3.20e-07;1!CL:0002625;3.20e-07;1!CL:0002581;3.20e-07;1!CL:0000216;3.20e-07;1!CL:0002591;3.20e-07;1!CL:0002594;5.55e-07;4 | |ontology_enrichment_celltype=CL:0000680!5.57e-24!57;CL:0000056!5.57e-24!57;CL:0000355!5.57e-24!57;CL:0000187!6.77e-24!54;CL:0000055!3.10e-22!180;CL:0000183!3.43e-21!59;CL:0000393!1.05e-20!60;CL:0000211!1.05e-20!60;CL:0000192!1.33e-14!42;CL:0000514!1.33e-14!42;CL:0002334!5.78e-14!12;CL:0000048!6.01e-13!430;CL:0000188!6.21e-13!9;CL:0000359!1.13e-12!32;CL:0000723!1.65e-12!436;CL:0002494!2.56e-12!16;CL:0000034!6.02e-12!444;CL:0000222!5.94e-11!119;CL:0000569!1.86e-10!4;CL:0000011!1.86e-10!4;CL:0002580!4.43e-08!3;CL:0002570!1.69e-07!8;CL:0000594!8.62e-07!3;CL:0000057!9.24e-07!75 | ||
| | |ontology_enrichment_celltype_v019=CL:0000569;9.78e-25;4!CL:0002570;9.34e-13;8!CL:0000359;1.52e-10;32!CL:0002539;2.86e-10;10!CL:0002580;3.17e-09;3!CL:0002334;3.06e-08;12!CL:0000222;1.42e-07;1!CL:0000511;3.20e-07;1!CL:0002625;3.20e-07;1!CL:0002581;3.20e-07;1!CL:0000216;3.20e-07;1!CL:0002591;3.20e-07;1!CL:0002594;5.55e-07;4 | ||
|ontology_enrichment_disease=DOID:1192;4.87e-09;3!DOID:3369;3.20e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0000569,8.95e-25,4;CL:0000011,8.95e-25,4;CL:0002570,1.01e-12,8;CL:0000359,5.02e-11,32;CL:0002539,2.45e-10,10;CL:0002580,2.75e-09,3;CL:0002334,2.60e-08,12;CL:0000192,6.57e-08,43;CL:0000514,6.57e-08,43;CL:0000511,2.83e-07,1;CL:0002625,2.83e-07,1;CL:0000216,2.83e-07,1;CL:0002581,3.20e-07,1;CL:0002591,4.90e-07,1;CL:0002594,7.06e-07,4 | ||
|ontology_enrichment_uberon=UBERON:0001013;6.78e-11;14!UBERON:0004237;2.86e-10;10!UBERON:0004695;2.86e-10;10!UBERON:0002111;2.86e-10;10!UBERON:0004178;2.86e-10;10!UBERON:0001136;3.20e-07;1!UBERON:0001343;3.20e-07;1!UBERON:0004910;3.20e-07;1!UBERON:0004813;3.20e-07;1!UBERON:0001310;5.55e-07;4!UBERON:0001135;7.20e-07;15 | |ontology_enrichment_development_v019=CL:0000011;9.78e-25;4!UBERON:0000358;1.42e-07;1 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;4.87e-09;3!DOID:3369;3.20e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,5.08e-09,3;DOID:3369,3.01e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001134!9.39e-24!61;UBERON:0002036!9.39e-24!61;UBERON:0003082!9.39e-24!61;UBERON:0002385!9.99e-23!63;UBERON:0001015!9.99e-23!63;UBERON:0000383!9.99e-23!63;UBERON:0004290!4.04e-21!70;UBERON:0000486!1.34e-19!82;UBERON:0000914!1.83e-16!83;UBERON:0002329!1.83e-16!83;UBERON:0003077!1.83e-16!83;UBERON:0003059!1.83e-16!83;UBERON:0007282!1.83e-16!83;UBERON:0009618!1.83e-16!83;UBERON:0007285!1.83e-16!83;UBERON:0004872!2.65e-11!84;UBERON:0000948!7.92e-11!24;UBERON:0005498!7.92e-11!24;UBERON:0004140!7.92e-11!24;UBERON:0009881!7.92e-11!24;UBERON:0004141!7.92e-11!24;UBERON:0003084!7.92e-11!24;UBERON:0007005!7.92e-11!24;UBERON:0004139!7.92e-11!24;UBERON:0004291!7.92e-11!24;UBERON:0001637!5.45e-10!42;UBERON:0003509!5.45e-10!42;UBERON:0004572!5.45e-10!42;UBERON:0007100!2.60e-09!27;UBERON:0004535!1.16e-08!110;UBERON:0002100!2.18e-08!216;UBERON:0001009!3.00e-08!113;UBERON:0000490!3.73e-08!138;UBERON:0002204!5.93e-08!167;UBERON:0005256!1.28e-07!143;UBERON:0004573!2.12e-07!33;UBERON:0004571!2.12e-07!33;UBERON:0001443!3.44e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;6.78e-11;14!UBERON:0004237;2.86e-10;10!UBERON:0004695;2.86e-10;10!UBERON:0002111;2.86e-10;10!UBERON:0004178;2.86e-10;10!UBERON:0001136;3.20e-07;1!UBERON:0001343;3.20e-07;1!UBERON:0004910;3.20e-07;1!UBERON:0004813;3.20e-07;1!UBERON:0001310;5.55e-07;4!UBERON:0001135;7.20e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,7.15e-11,14;UBERON:0004237,2.45e-10,10;UBERON:0004695,2.45e-10,10;UBERON:0002111,2.45e-10,10;UBERON:0004178,2.45e-10,10;UBERON:0004872,8.40e-10,83;UBERON:0001637,4.00e-08,42;UBERON:0003509,4.00e-08,42;UBERON:0004572,4.00e-08,42;UBERON:0001136,2.83e-07,1;UBERON:0001343,2.83e-07,1;UBERON:0004910,2.83e-07,1;UBERON:0005154,2.83e-07,1;UBERON:0005295,2.83e-07,1;UBERON:0004813,2.83e-07,1;UBERON:0005297,2.83e-07,1;UBERON:0005294,2.83e-07,1;UBERON:0010141,2.83e-07,1;UBERON:0005891,2.83e-07,1;UBERON:0001135,6.51e-07,15;UBERON:0001310,7.06e-07,4;UBERON:0004535,7.39e-07,109 | |||
|phase1_expression=1.99846217197612,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,4.03395087871065,4.21886169616784,3.65155045193687,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0.860509862246441,0,0.560677600142307,0,0.49333509683432,0.622422070799533,0,0.163461903113459,0.756787138224657,1.15235184896,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.22001485746285,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902838299183157,2.27407504055985,2.0694614258501,1.32845119707087,0,0,0,0,0,0,0,0,0,0,5.70647957983187,0.61384789315225,1.68396056659844,1.92208723883551,0,0.482561763430822,1.48418066444991,0.154209693802656,0,0.246381468041427,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0.725083469571143,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.572499546967965,0,0,0.571890581771475,0.255897791311334,0,0.318203247925937,0,0,0,0.117812402345686,0.404364963146632,0,0,0.48763373908959,0.243713489631284,0,0,0,1.13008116620243,0,1.32687795048244,0.438450885253763,0,0.655894752046633,1.21746226177622,0,0,0,0,2.1400263088875,0,0.211107635297664,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23882204330311,0.233713309847224,2.21922344601045,0.568209015825267,0.50313580350515,2.66943366478961,5.03448150473232,2.41969478021182,1.86524640699337,1.18284119991707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40376993627955,3.36749488765919,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,2.22603045457393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,10.8156640530947,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0,0 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|phase1_expression=1.99846217197612,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,4.03395087871065,4.21886169616784,3.65155045193687,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0.860509862246441,0,0.560677600142307,0,0.49333509683432,0.622422070799533,0,0.163461903113459,0.756787138224657,1.15235184896,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.22001485746285,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902838299183157,2.27407504055985,2.0694614258501,1.32845119707087,0,0,0,0,0,0,0,0,0,0,5.70647957983187,0.61384789315225,1.68396056659844,1.92208723883551,0,0.482561763430822,1.48418066444991,0.154209693802656,0,0.246381468041427,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0.725083469571143,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.572499546967965,0,0,0.571890581771475,0.255897791311334,0,0.318203247925937,0,0,0,0.117812402345686,0.404364963146632,0,0,0.48763373908959,0.243713489631284,0,0,0,1.13008116620243,0,1.32687795048244,0.438450885253763,0,0.655894752046633,1.21746226177622,0,0,0,0,2.1400263088875,0,0.211107635297664,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23882204330311,0.233713309847224,2.21922344601045,0.568209015825267,0.50313580350515,2.66943366478961,5.03448150473232,2.41969478021182,1.86524640699337,1.18284119991707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40376993627955,3.36749488765919,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,2.22603045457393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,10.8156640530947,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr7:93941132..93941136,+ | |short_description=p@chr7:93941132..93941136,+ | ||
}} | }} |
Latest revision as of 12:40, 31 July 2015
Short description: | p@chr7:93941132..93941136, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93941132..93941136, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 8.95e-25 | 4 |
migratory trunk neural crest cell | 8.95e-25 | 4 |
mesenchymal stem cell of adipose | 1.01e-12 | 8 |
vascular associated smooth muscle cell | 5.02e-11 | 32 |
aortic smooth muscle cell | 2.45e-10 | 10 |
preadipocyte of the breast | 2.75e-09 | 3 |
preadipocyte | 2.60e-08 | 12 |
smooth muscle cell | 6.57e-08 | 43 |
smooth muscle myoblast | 6.57e-08 | 43 |
androgen binding protein secreting cell | 2.83e-07 | 1 |
seminiferous tubule epithelial cell | 2.83e-07 | 1 |
Sertoli cell | 2.83e-07 | 1 |
perirenal preadipocyte | 3.20e-07 | 1 |
smooth muscle cell of the pulmonary artery | 4.90e-07 | 1 |
smooth muscle cell of the umbilical artery | 7.06e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 7.15e-11 | 14 |
blood vessel smooth muscle | 2.45e-10 | 10 |
arterial system smooth muscle | 2.45e-10 | 10 |
artery smooth muscle tissue | 2.45e-10 | 10 |
aorta smooth muscle tissue | 2.45e-10 | 10 |
splanchnic layer of lateral plate mesoderm | 8.40e-10 | 83 |
artery | 4.00e-08 | 42 |
arterial blood vessel | 4.00e-08 | 42 |
arterial system | 4.00e-08 | 42 |
mesothelium | 2.83e-07 | 1 |
seminiferous tubule of testis | 2.83e-07 | 1 |
epithelium of male gonad | 2.83e-07 | 1 |
epithelial cord | 2.83e-07 | 1 |
sex cord | 2.83e-07 | 1 |
seminiferous tubule epithelium | 2.83e-07 | 1 |
testis sex cord | 2.83e-07 | 1 |
genital ridge | 2.83e-07 | 1 |
primitive sex cord of indifferent gonad | 2.83e-07 | 1 |
coelomic epithelium | 2.83e-07 | 1 |
smooth muscle tissue | 6.51e-07 | 15 |
umbilical artery | 7.06e-07 | 4 |
cardiovascular system | 7.39e-07 | 109 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 5.08e-09 | 3 |
peripheral primitive neuroectodermal tumor | 3.01e-07 | 1 |