FFCP PHASE1:Hg19::chr9:117786308..117786326,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:117786308..117786326,- | |||
|coexpression_cluster_id=C864 | |coexpression_cluster_id=C864 | ||
|description=CAGE_peak_at_chr9:117786308..117786326,- | |description=CAGE_peak_at_chr9:117786308..117786326,- | ||
|id=chr9:117786308..117786326,- | |id=chr9:117786308..117786326,- | ||
|ontology_enrichment_celltype=CL:0000055!2.55e-09!180;CL:0002620!1.60e-08!23;CL:0000153!7.05e-08!9;CL:0000447!7.05e-08!9 | |ontology_enrichment_celltype=CL:0000055!2.55e-09!180;CL:0002620!1.60e-08!23;CL:0000153!7.05e-08!9;CL:0000447!7.05e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000153;1.78e-31;9!CL:0000447;1.78e-31;9!CL:0000138;7.12e-25;6!CL:0000499;1.03e-19;28!CL:0000135;2.11e-19;3!CL:0000388;2.11e-19;3!CL:0000327;1.46e-18;15!CL:0000244;1.20e-13;4!CL:0000731;1.20e-13;4!CL:0002582;1.10e-08;3!CL:0000214;1.10e-08;3!CL:0002570;2.58e-07;8!CL:0002616;3.96e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.33e-31,9;CL:0000447,1.33e-31,9;CL:0000058,8.12e-25,6;CL:0000138,8.12e-25,6;CL:0000499,8.50e-20,28;CL:0000135,1.76e-19,3;CL:0000388,1.76e-19,3;CL:0000327,1.23e-18,15;CL:0000244,1.12e-13,4;CL:0000731,1.12e-13,4;CL:0000214,7.72e-09,3;CL:0002582,1.56e-08,3;CL:0002616,2.52e-07,1;CL:0000151,2.95e-07,36;CL:0002570,3.04e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.10e-08;3!DOID:127;1.10e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.78e-09,3;DOID:127,9.78e-09,3;DOID:0060072,9.38e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.72e-08!45;UBERON:0002416!2.72e-08!45;UBERON:0002097!6.28e-07!40;UBERON:0003102!8.40e-07!95 | |ontology_enrichment_uberon=UBERON:0002199!2.72e-08!45;UBERON:0002416!2.72e-08!45;UBERON:0002097!6.28e-07!40;UBERON:0003102!8.40e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.11e-19;3!UBERON:0000043;2.11e-19;3!UBERON:0007845;2.11e-19;3!UBERON:0000486;6.32e-12;12!UBERON:0000365;5.04e-11;5!UBERON:0001013;1.51e-10;14!UBERON:0005910;2.87e-09;6!UBERON:0006915;1.10e-08;3!UBERON:0007616;1.10e-08;3!UBERON:0002217;1.10e-08;3!UBERON:0002018;1.10e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.76e-19,3;UBERON:0000043,1.76e-19,3;UBERON:0007845,1.76e-19,3;UBERON:0000365,4.79e-11,5;UBERON:0001013,1.54e-10,14;UBERON:0005910,2.75e-09,6;UBERON:0006915,7.72e-09,3;UBERON:0007616,7.72e-09,3;UBERON:0002217,7.72e-09,3;UBERON:0002018,7.72e-09,3 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0,3.00219895059391,0,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.612002073732759,2.5076377718247,0,0.821246550437305,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,3.62116297402059,1.5905718941022,7.29952305453954,0.661743720148475,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0.323745888736263,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,1.07633781413317,0.640672166455702,0.847727604638247,0.300091096084402,0,0.772921620136887,0,0.506328996723799,0.487185025805993,0,0.276149695926898,0,1.42003837006646,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,2.535908257668,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0,0,0,0.289562613335158,0.61642896765115,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0.415941723061614,1.78428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,0,1.99267679560631,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0,0,0.841980283299221,0,0,0,0,0.616838775210622,0.355123450626254,0.410635780069046,1.03850885836724,1.39452454151951,0,0.40101294060657,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.445160178233687,0.165284915360978,0.576570202095319,0.127612712494584,0.910420027699949,0,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0,1.47775344708365,1.64647446479951,0,0,0.192444225451024,0,0,0,1.29151611801369,1.68471475667626,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0.16480387422676,0,0.398495976502139,0,0,0.306806047506464,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,1.08599920350743,0,1.95952416065645,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0.895528817321244,2.80455971816669,0,1.32582103692562,3.27038272278348,0,0,0,0.466311601748341,0.591420599958536,1.11507737014592,0.449803112163605,1.39736661188633,0,0,0.521745061811734,0.901545653983311,0,0.813741466409323,0.909243296012797,0,0,0.398095888698616,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0.943595651135378,0,0,1.2754495206101,0.123935764259002,0,0,0,0,0.705351887381368,0,0,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0.879356221798103,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0.352894871715692,0,0.730336388246517,0,0.143339583151451,0,0,0.436350690340377,0,4.09194519983426,3.69740502905135,2.59575937274273,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.33639558774184,0,0,0.217716747896961,0,0.134704106029175,0.215166616178029,0.332660356546013,0.162806537221949,0,0,0,0,0,0.406896178315738,0,0,0 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|phase1_expression=0.181678379270557,0.856402095563933,0,3.00219895059391,0,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.612002073732759,2.5076377718247,0,0.821246550437305,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,3.62116297402059,1.5905718941022,7.29952305453954,0.661743720148475,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0.323745888736263,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,1.07633781413317,0.640672166455702,0.847727604638247,0.300091096084402,0,0.772921620136887,0,0.506328996723799,0.487185025805993,0,0.276149695926898,0,1.42003837006646,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,2.535908257668,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0,0,0,0.289562613335158,0.61642896765115,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0.415941723061614,1.78428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,0,1.99267679560631,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0,0,0.841980283299221,0,0,0,0,0.616838775210622,0.355123450626254,0.410635780069046,1.03850885836724,1.39452454151951,0,0.40101294060657,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.445160178233687,0.165284915360978,0.576570202095319,0.127612712494584,0.910420027699949,0,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0,1.47775344708365,1.64647446479951,0,0,0.192444225451024,0,0,0,1.29151611801369,1.68471475667626,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0.16480387422676,0,0.398495976502139,0,0,0.306806047506464,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,1.08599920350743,0,1.95952416065645,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0.895528817321244,2.80455971816669,0,1.32582103692562,3.27038272278348,0,0,0,0.466311601748341,0.591420599958536,1.11507737014592,0.449803112163605,1.39736661188633,0,0,0.521745061811734,0.901545653983311,0,0.813741466409323,0.909243296012797,0,0,0.398095888698616,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0.943595651135378,0,0,1.2754495206101,0.123935764259002,0,0,0,0,0.705351887381368,0,0,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0.879356221798103,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0.352894871715692,0,0.730336388246517,0,0.143339583151451,0,0,0.436350690340377,0,4.09194519983426,3.69740502905135,2.59575937274273,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.33639558774184,0,0,0.217716747896961,0,0.134704106029175,0.215166616178029,0.332660356546013,0.162806537221949,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr9:117786308..117786326,- | |short_description=p@chr9:117786308..117786326,- | ||
}} | }} |
Latest revision as of 22:08, 31 July 2015
Short description: | p@chr9:117786308..117786326, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:117786308..117786326, - |
Coexpression cluster: | C864_Chondrocyte_peripheral_Fibroblast_Adipocyte_mesenchymal_Neural_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.33e-31 | 9 |
carbohydrate secreting cell | 1.33e-31 | 9 |
chondroblast | 8.12e-25 | 6 |
chondrocyte | 8.12e-25 | 6 |
stromal cell | 8.50e-20 | 28 |
fibrocyte | 1.76e-19 | 3 |
tendon cell | 1.76e-19 | 3 |
extracellular matrix secreting cell | 1.23e-18 | 15 |
transitional epithelial cell | 1.12e-13 | 4 |
urothelial cell | 1.12e-13 | 4 |
synovial cell | 7.72e-09 | 3 |
visceral preadipocyte | 1.56e-08 | 3 |
perirenal adipocyte cell | 2.52e-07 | 1 |
secretory cell | 2.95e-07 | 36 |
mesenchymal stem cell of adipose | 3.04e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.76e-19 | 3 |
tendon | 1.76e-19 | 3 |
regular connective tissue | 1.76e-19 | 3 |
urothelium | 4.79e-11 | 5 |
adipose tissue | 1.54e-10 | 14 |
transitional epithelium | 2.75e-09 | 6 |
stratified squamous epithelium | 7.72e-09 | 3 |
layer of synovial tissue | 7.72e-09 | 3 |
synovial joint | 7.72e-09 | 3 |
synovial membrane of synovial joint | 7.72e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.78e-09 | 3 |
leiomyoma | 9.78e-09 | 3 |
benign neoplasm | 9.38e-07 | 4 |