FFCP PHASE1:Hg19::chr1:159770292..159770315,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:159770292..159770315,+
|short_description=p1@FCRL6
|description=CAGE_peak_1_at_FCRL6_5end
|association_with_transcript=0bp_to_ENST00000321935,ENST000005362...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=343413 | |EntrezGene=343413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31910 | |HGNC=31910 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYB3 | |UniProt=F5GYB3 | ||
|association_with_transcript=0bp_to_ENST00000321935,ENST00000536257,ENST00000540741,uc001fuc.2,uc010pix.1_5end | |||
|cluster_id=chr1:159770292..159770315,+ | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_1_at_FCRL6_5end | |||
|id=chr1:159770292..159770315,+ | |||
|ontology_enrichment_celltype=CL:0000625!5.69e-18!11;CL:0000791!6.37e-18!18;CL:0000789!6.37e-18!18;CL:0002420!6.37e-18!18;CL:0002419!6.37e-18!18;CL:0000790!6.37e-18!18;CL:0000838!2.83e-15!52;CL:0000084!6.39e-15!25;CL:0000827!6.39e-15!25;CL:0000542!8.12e-15!53;CL:0000051!8.12e-15!53;CL:0002087!1.93e-12!119;CL:0000738!2.27e-12!140;CL:0002031!4.31e-09!124;CL:0000037!1.33e-08!172;CL:0000566!1.33e-08!172;CL:0002032!1.17e-07!165;CL:0000837!1.17e-07!165;CL:0000988!2.01e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.80e-33;11!CL:0000791;1.15e-30;18!CL:0000789;1.15e-30;18!CL:0002419;1.15e-30;18!CL:0000084;5.19e-24;25!CL:0000623;1.67e-10;3!CL:0000767;8.84e-10;3!CL:0000226;1.02e-09;3!CL:0000842;1.02e-09;3!CL:0000542;6.04e-09;53!CL:0000094;9.11e-09;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.82e-33,11;CL:0000791,1.04e-30,18;CL:0000789,1.04e-30,18;CL:0002420,1.04e-30,18;CL:0002419,1.04e-30,18;CL:0000790,1.04e-30,18;CL:0000084,3.97e-24,25;CL:0000827,3.97e-24,25;CL:0000838,2.15e-16,52;CL:0000542,5.47e-16,53;CL:0000051,5.47e-16,53;CL:0000738,7.86e-14,136;CL:0002087,8.94e-12,115;CL:0000623,1.67e-10,3;CL:0000825,1.67e-10,3;CL:0000767,8.99e-10,3;CL:0000226,1.01e-09,3;CL:0000842,1.01e-09,3;CL:0000037,1.11e-09,168;CL:0000988,8.45e-09,177;CL:0000094,1.02e-08,8;CL:0002031,4.23e-08,120;CL:0002032,6.41e-08,161;CL:0000837,6.41e-08,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.15e-30;18!CL:0000051;6.04e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.47e-36!115;UBERON:0000178!5.01e-14!15;UBERON:0000179!5.01e-14!15;UBERON:0000463!5.01e-14!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.43e-27;15!UBERON:0000179;7.43e-27;15!UBERON:0000463;7.43e-27;15!UBERON:0002390;2.14e-14;32!UBERON:0002193;2.45e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.39e-27,15;UBERON:0000179,7.39e-27,15;UBERON:0000463,7.39e-27,15;UBERON:0002193,2.50e-07,108;UBERON:0007023,3.05e-07,114;UBERON:0002390,7.55e-07,98;UBERON:0003061,7.55e-07,98 | |||
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| ||
|short_description=p1@FCRL6 | |||
}} | }} |
Latest revision as of 23:26, 17 September 2015
Short description: | p1@FCRL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FCRL6_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 0bp_to_ENST00000321935, ENST00000536257, ENST00000540741, uc001fuc.2, uc010pix.1_5end |
EntrezGene: | FCRL6 |
HGNC: | 31910 |
UniProt: | F5GYB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.82e-33 | 11 |
mature alpha-beta T cell | 1.04e-30 | 18 |
alpha-beta T cell | 1.04e-30 | 18 |
immature T cell | 1.04e-30 | 18 |
mature T cell | 1.04e-30 | 18 |
immature alpha-beta T cell | 1.04e-30 | 18 |
T cell | 3.97e-24 | 25 |
pro-T cell | 3.97e-24 | 25 |
lymphoid lineage restricted progenitor cell | 2.15e-16 | 52 |
lymphocyte | 5.47e-16 | 53 |
common lymphoid progenitor | 5.47e-16 | 53 |
leukocyte | 7.86e-14 | 136 |
nongranular leukocyte | 8.94e-12 | 115 |
natural killer cell | 1.67e-10 | 3 |
pro-NK cell | 1.67e-10 | 3 |
basophil | 8.99e-10 | 3 |
single nucleate cell | 1.01e-09 | 3 |
mononuclear cell | 1.01e-09 | 3 |
hematopoietic stem cell | 1.11e-09 | 168 |
hematopoietic cell | 8.45e-09 | 177 |
granulocyte | 1.02e-08 | 8 |
hematopoietic lineage restricted progenitor cell | 4.23e-08 | 120 |
hematopoietic oligopotent progenitor cell | 6.41e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.41e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 7.39e-27 | 15 |
haemolymphatic fluid | 7.39e-27 | 15 |
organism substance | 7.39e-27 | 15 |
hemolymphoid system | 2.50e-07 | 108 |
adult organism | 3.05e-07 | 114 |
hematopoietic system | 7.55e-07 | 98 |
blood island | 7.55e-07 | 98 |