FFCP PHASE1:Hg19::chr10:81370638..81370651,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=653509 | |EntrezGene=653509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10798 | |HGNC=10798 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWL2,E3VLE0,B4DNP6 | |UniProt=Q8IWL2,E3VLE0,B4DNP6 | ||
|association_with_transcript=-43bp_to_ENST00000372308,ENST00000398636,ENST00000428376,NM_001093770,NM_001164644,NM_001164645,NM_001164646,NM_001164647,NM_005411_5end | |association_with_transcript=-43bp_to_ENST00000372308,ENST00000398636,ENST00000428376,NM_001093770,NM_001164644,NM_001164645,NM_001164646,NM_001164647,NM_005411_5end | ||
|cluster_id=chr10:81370638..81370651,+ | |||
|coexpression_cluster_id=C95 | |coexpression_cluster_id=C95 | ||
|description=CAGE_peak_3_at_SFTPA1_5end | |description=CAGE_peak_3_at_SFTPA1_5end | ||
|id=chr10:81370638..81370651,+ | |id=chr10:81370638..81370651,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.72e-11;29!UBERON:0001041;1.04e-10;30 | |||
|ontology_enrichment_disease=DOID:4556!1.67e-09!3 | |ontology_enrichment_disease=DOID:4556!1.67e-09!3 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!2.16e-26!1;UBERON:0006518!2.16e-26!1;UBERON:0008949!2.16e-26!1;UBERON:0000101!2.16e-26!1;UBERON:0002167!2.16e-26!1;UBERON:0002048!1.66e-18!22;UBERON:0000117!1.66e-18!22;UBERON:0000171!1.66e-18!22;UBERON:0000170!1.66e-18!22;UBERON:0005597!1.66e-18!22;UBERON:0000118!1.66e-18!22;UBERON:0005178!3.77e-12!34;UBERON:0002224!3.77e-12!34;UBERON:0005181!8.13e-12!35;UBERON:0005153!3.35e-11!37;UBERON:0008947!6.43e-11!38;UBERON:0003258!6.43e-11!38;UBERON:0005157!3.09e-08!51;UBERON:0000915!4.38e-08!52;UBERON:0000065!6.12e-08!53 | |ontology_enrichment_uberon=UBERON:0002171!2.16e-26!1;UBERON:0006518!2.16e-26!1;UBERON:0008949!2.16e-26!1;UBERON:0000101!2.16e-26!1;UBERON:0002167!2.16e-26!1;UBERON:0002048!1.66e-18!22;UBERON:0000117!1.66e-18!22;UBERON:0000171!1.66e-18!22;UBERON:0000170!1.66e-18!22;UBERON:0005597!1.66e-18!22;UBERON:0000118!1.66e-18!22;UBERON:0005178!3.77e-12!34;UBERON:0002224!3.77e-12!34;UBERON:0005181!8.13e-12!35;UBERON:0005153!3.35e-11!37;UBERON:0008947!6.43e-11!38;UBERON:0003258!6.43e-11!38;UBERON:0005157!3.09e-08!51;UBERON:0000915!4.38e-08!52;UBERON:0000065!6.12e-08!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.84e-34;1!UBERON:0006518;1.84e-34;1!UBERON:0008949;1.84e-34;1!UBERON:0000101;1.84e-34;1!UBERON:0002167;1.84e-34;1!UBERON:0002048;2.55e-14;22!UBERON:0000117;2.55e-14;22!UBERON:0000171;2.55e-14;22!UBERON:0000170;2.55e-14;22!UBERON:0005178;1.40e-08;34!UBERON:0002224;1.40e-08;34!UBERON:0000065;5.56e-07;44!UBERON:0005181;7.05e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.84e-34,1;UBERON:0006518,1.84e-34,1;UBERON:0008949,1.84e-34,1;UBERON:0000101,1.84e-34,1;UBERON:0002167,1.84e-34,1;UBERON:0002048,2.61e-14,22;UBERON:0000117,2.61e-14,22;UBERON:0000171,2.61e-14,22;UBERON:0000170,2.61e-14,22;UBERON:0005597,2.61e-14,22;UBERON:0000118,2.61e-14,22;UBERON:0005178,1.57e-09,34;UBERON:0002224,1.57e-09,34;UBERON:0005181,2.81e-09,35;UBERON:0005153,8.17e-09,37;UBERON:0008947,1.34e-08,38;UBERON:0003258,1.34e-08,38;UBERON:0005157,4.40e-07,47 | |||
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|short_description=p3@SFTPA1 | |short_description=p3@SFTPA1 | ||
}} | }} |
Latest revision as of 14:22, 19 September 2015
Short description: | p3@SFTPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SFTPA1_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | -43bp_to_ENST00000372308, ENST00000398636, ENST00000428376, NM_001093770, NM_001164644, NM_001164645, NM_001164646, NM_001164647, NM_005411_5end |
EntrezGene: | SFTPA1 |
HGNC: | 10798 |
UniProt: | Q8IWL2E3VLE0B4DNP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.84e-34 | 1 |
right lung lobe | 1.84e-34 | 1 |
lower lobe of lung | 1.84e-34 | 1 |
lobe of lung | 1.84e-34 | 1 |
right lung | 1.84e-34 | 1 |
lung | 2.61e-14 | 22 |
respiratory tube | 2.61e-14 | 22 |
respiration organ | 2.61e-14 | 22 |
pair of lungs | 2.61e-14 | 22 |
lung primordium | 2.61e-14 | 22 |
lung bud | 2.61e-14 | 22 |
thoracic cavity element | 1.57e-09 | 34 |
thoracic cavity | 1.57e-09 | 34 |
thoracic segment organ | 2.81e-09 | 35 |
epithelial bud | 8.17e-09 | 37 |
respiratory primordium | 1.34e-08 | 38 |
endoderm of foregut | 1.34e-08 | 38 |
epithelial fold | 4.40e-07 | 47 |