FFCP PHASE1:Hg19::chr13:105490195..105490246,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:105490195..105490246,- | |||
|coexpression_cluster_id=C141 | |coexpression_cluster_id=C141 | ||
|description=CAGE_peak_at_chr13:105490195..105490246,- | |description=CAGE_peak_at_chr13:105490195..105490246,- | ||
|id=chr13:105490195..105490246,- | |id=chr13:105490195..105490246,- | ||
|ontology_enrichment_celltype=CL:0001024!1.84e-08!1 | |ontology_enrichment_celltype=CL:0001024!1.84e-08!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.12e-09;2 | |||
|ontology_enrichment_disease=DOID:1240!1.03e-13!39;DOID:2531!1.22e-12!51;DOID:0060083!1.22e-12!51;DOID:8692!1.29e-10!31;DOID:225!8.78e-09!1;DOID:5409!7.99e-08!4 | |ontology_enrichment_disease=DOID:1240!1.03e-13!39;DOID:2531!1.22e-12!51;DOID:0060083!1.22e-12!51;DOID:8692!1.29e-10!31;DOID:225!8.78e-09!1;DOID:5409!7.99e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:225;7.37e-18;1!DOID:2531;5.52e-13;51!DOID:0060083;5.52e-13;51!DOID:1240;6.63e-13;39!DOID:74;1.33e-09;2!DOID:8692;1.16e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:225,7.37e-18,1;DOID:2531,1.74e-15,51;DOID:0060083,1.74e-15,51;DOID:1240,5.26e-15,39;DOID:74,1.33e-09,2;DOID:8692,9.59e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.54e-10!7;UBERON:0002370!1.78e-08!4;UBERON:0005058!1.78e-08!4;UBERON:0009113!1.78e-08!4;UBERON:0003295!1.78e-08!4;UBERON:0005562!1.78e-08!4;UBERON:0001282!2.29e-08!1;UBERON:0009842!2.29e-08!1;UBERON:0003704!2.29e-08!1;UBERON:0001171!2.29e-08!1;UBERON:0001172!2.29e-08!1;UBERON:0006834!3.28e-08!1;UBERON:0002336!4.07e-08!1;UBERON:0001018!4.07e-08!1;UBERON:0002473!4.07e-08!1;UBERON:0005340!4.07e-08!1;UBERON:0002316!4.07e-08!1;UBERON:0003544!4.07e-08!1;UBERON:0001020!4.07e-08!1;UBERON:0005970!4.07e-08!1;UBERON:0002437!4.07e-08!1;UBERON:0000974!2.99e-07!10 | |ontology_enrichment_uberon=UBERON:0004177!5.54e-10!7;UBERON:0002370!1.78e-08!4;UBERON:0005058!1.78e-08!4;UBERON:0009113!1.78e-08!4;UBERON:0003295!1.78e-08!4;UBERON:0005562!1.78e-08!4;UBERON:0001282!2.29e-08!1;UBERON:0009842!2.29e-08!1;UBERON:0003704!2.29e-08!1;UBERON:0001171!2.29e-08!1;UBERON:0001172!2.29e-08!1;UBERON:0006834!3.28e-08!1;UBERON:0002336!4.07e-08!1;UBERON:0001018!4.07e-08!1;UBERON:0002473!4.07e-08!1;UBERON:0005340!4.07e-08!1;UBERON:0002316!4.07e-08!1;UBERON:0003544!4.07e-08!1;UBERON:0001020!4.07e-08!1;UBERON:0005970!4.07e-08!1;UBERON:0002437!4.07e-08!1;UBERON:0000974!2.99e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.18e-34;2!UBERON:0005058;2.18e-34;2!UBERON:0009113;2.18e-34;2!UBERON:0004177;2.11e-14;5!UBERON:0005057;2.11e-14;5!UBERON:0000341;1.57e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.51e-18,4;UBERON:0005058,9.51e-18,4;UBERON:0009113,9.51e-18,4;UBERON:0003295,9.51e-18,4;UBERON:0005562,9.51e-18,4;UBERON:0000974,1.36e-15,10;UBERON:0003351,3.64e-12,6;UBERON:0004177,1.46e-10,7;UBERON:0005057,1.46e-10,7;UBERON:0000341,1.71e-09,2;UBERON:0003408,1.16e-07,10;UBERON:0001042,1.16e-07,10;UBERON:0009145,1.16e-07,10;UBERON:0006562,4.85e-07,11;UBERON:0009722,4.85e-07,11;UBERON:0007690,4.85e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,237.948610584497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,171.451842469678,0,0,0,0,2.59697552219644,0,0,3.60363760277953,0,0,0,0,0,1.71752672377882,0.614481528616916,0.223676107892416,0.333698283423817,3.32159762183469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,18.3947936752326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.575112808284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09483760902862,68.1412998769864,49.349397865207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,19.9261055655116,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,237.948610584497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,171.451842469678,0,0,0,0,2.59697552219644,0,0,3.60363760277953,0,0,0,0,0,1.71752672377882,0.614481528616916,0.223676107892416,0.333698283423817,3.32159762183469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,18.3947936752326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.575112808284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09483760902862,68.1412998769864,49.349397865207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,19.9261055655116,0 | ||
|short_description=p@chr13:105490195..105490246,- | |short_description=p@chr13:105490195..105490246,- | ||
}} | }} |
Latest revision as of 14:21, 24 July 2015
Short description: | p@chr13:105490195..105490246, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:105490195..105490246, - |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 9.51e-18 | 4 |
hemolymphoid system gland | 9.51e-18 | 4 |
thymic region | 9.51e-18 | 4 |
pharyngeal gland | 9.51e-18 | 4 |
thymus primordium | 9.51e-18 | 4 |
neck | 1.36e-15 | 10 |
pharyngeal epithelium | 3.64e-12 | 6 |
hemopoietic organ | 1.46e-10 | 7 |
immune organ | 1.46e-10 | 7 |
throat | 1.71e-09 | 2 |
gland of gut | 1.16e-07 | 10 |
chordate pharynx | 1.16e-07 | 10 |
pharyngeal region of foregut | 1.16e-07 | 10 |
pharynx | 4.85e-07 | 11 |
entire pharyngeal arch endoderm | 4.85e-07 | 11 |
early pharyngeal endoderm | 4.85e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
syndrome | 7.37e-18 | 1 |
hematologic cancer | 1.74e-15 | 51 |
immune system cancer | 1.74e-15 | 51 |
leukemia | 5.26e-15 | 39 |
hematopoietic system disease | 1.33e-09 | 2 |
myeloid leukemia | 9.59e-09 | 31 |