FFCP PHASE1:Hg19::chr17:62144141..62144166,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:62144141..62144166,- | |||
|coexpression_cluster_id=C343 | |coexpression_cluster_id=C343 | ||
|description=CAGE_peak_at_chr17:62144141..62144166,- | |description=CAGE_peak_at_chr17:62144141..62144166,- | ||
|id=chr17:62144141..62144166,- | |id=chr17:62144141..62144166,- | ||
|ontology_enrichment_celltype=CL:0000738!2.43e-22!140;CL:0000791!1.08e-19!18;CL:0000789!1.08e-19!18;CL:0002420!1.08e-19!18;CL:0002419!1.08e-19!18;CL:0000790!1.08e-19!18;CL:0000625!1.18e-16!11;CL:0002087!9.92e-16!119;CL:0002031!8.28e-15!124;CL:0000037!1.05e-14!172;CL:0000566!1.05e-14!172;CL:0002032!1.41e-13!165;CL:0000837!1.41e-13!165;CL:0000988!1.43e-13!182;CL:0000084!1.18e-12!25;CL:0000827!1.18e-12!25;CL:0000766!6.68e-12!76;CL:0002009!3.80e-09!65;CL:0000557!4.21e-09!71;CL:0002057!4.89e-09!42;CL:0000860!7.37e-09!45;CL:0002194!5.24e-08!63;CL:0000576!5.24e-08!63;CL:0000040!5.24e-08!63;CL:0000559!5.24e-08!63;CL:0000763!7.53e-08!112;CL:0000049!7.53e-08!112;CL:0000839!8.83e-08!70;CL:0000094!7.00e-07!8 | |ontology_enrichment_celltype=CL:0000738!2.43e-22!140;CL:0000791!1.08e-19!18;CL:0000789!1.08e-19!18;CL:0002420!1.08e-19!18;CL:0002419!1.08e-19!18;CL:0000790!1.08e-19!18;CL:0000625!1.18e-16!11;CL:0002087!9.92e-16!119;CL:0002031!8.28e-15!124;CL:0000037!1.05e-14!172;CL:0000566!1.05e-14!172;CL:0002032!1.41e-13!165;CL:0000837!1.41e-13!165;CL:0000988!1.43e-13!182;CL:0000084!1.18e-12!25;CL:0000827!1.18e-12!25;CL:0000766!6.68e-12!76;CL:0002009!3.80e-09!65;CL:0000557!4.21e-09!71;CL:0002057!4.89e-09!42;CL:0000860!7.37e-09!45;CL:0002194!5.24e-08!63;CL:0000576!5.24e-08!63;CL:0000040!5.24e-08!63;CL:0000559!5.24e-08!63;CL:0000763!7.53e-08!112;CL:0000049!7.53e-08!112;CL:0000839!8.83e-08!70;CL:0000094!7.00e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.88e-42;18!CL:0000789;5.88e-42;18!CL:0002419;5.88e-42;18!CL:0000625;3.24e-34;11!CL:0000084;4.96e-29;25!CL:0000624;1.46e-12;6!CL:0000623;3.23e-11;3!CL:0000767;1.18e-10;3!CL:0000094;2.03e-10;8!CL:0000226;2.40e-10;3!CL:0000842;2.40e-10;3!CL:0000542;7.74e-09;53!CL:0000771;5.81e-08;2!CL:0000081;1.83e-07;11!CL:0002087;4.90e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.55e-42,18;CL:0000789,3.55e-42,18;CL:0002420,3.55e-42,18;CL:0002419,3.55e-42,18;CL:0000790,3.55e-42,18;CL:0000625,2.19e-34,11;CL:0000084,3.47e-29,25;CL:0000827,3.47e-29,25;CL:0000738,2.55e-22,136;CL:0002087,4.76e-18,115;CL:0000838,8.86e-18,52;CL:0000542,2.38e-17,53;CL:0000051,2.38e-17,53;CL:0000037,2.55e-16,168;CL:0000988,4.99e-15,177;CL:0002031,2.79e-14,120;CL:0002032,6.49e-14,161;CL:0000837,6.49e-14,161;CL:0000624,1.26e-12,6;CL:0000623,3.41e-11,3;CL:0000825,3.41e-11,3;CL:0000767,1.04e-10,3;CL:0000094,1.88e-10,8;CL:0000226,2.64e-10,3;CL:0000842,2.64e-10,3;CL:0000771,5.82e-08,2;CL:0000081,1.74e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;5.88e-42;18!CL:0000051;7.74e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.83e-16!102;UBERON:0003061!1.83e-16!102;UBERON:0002193!1.45e-15!112;UBERON:0007023!1.80e-14!115;UBERON:0000178!6.85e-13!15;UBERON:0000179!6.85e-13!15;UBERON:0000463!6.85e-13!15;UBERON:0002405!2.94e-07!115;UBERON:0002371!3.31e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!1.83e-16!102;UBERON:0003061!1.83e-16!102;UBERON:0002193!1.45e-15!112;UBERON:0007023!1.80e-14!115;UBERON:0000178!6.85e-13!15;UBERON:0000179!6.85e-13!15;UBERON:0000463!6.85e-13!15;UBERON:0002405!2.94e-07!115;UBERON:0002371!3.31e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.45e-24;15!UBERON:0000179;6.45e-24;15!UBERON:0000463;6.45e-24;15!UBERON:0002390;1.35e-13;32!UBERON:0002193;1.97e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.44e-24,15;UBERON:0000179,7.44e-24,15;UBERON:0000463,7.44e-24,15;UBERON:0002390,9.78e-12,98;UBERON:0003061,9.78e-12,98;UBERON:0002193,3.92e-10,108 | |||
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| ||
|short_description=p@chr17:62144141..62144166,- | |short_description=p@chr17:62144141..62144166,- | ||
}} | }} |
Latest revision as of 19:50, 25 July 2015
Short description: | p@chr17:62144141..62144166, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:62144141..62144166, - |
Coexpression cluster: | C343_CD4_mycosis_kidney_signet_hairy_b_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.55e-42 | 18 |
alpha-beta T cell | 3.55e-42 | 18 |
immature T cell | 3.55e-42 | 18 |
mature T cell | 3.55e-42 | 18 |
immature alpha-beta T cell | 3.55e-42 | 18 |
CD8-positive, alpha-beta T cell | 2.19e-34 | 11 |
T cell | 3.47e-29 | 25 |
pro-T cell | 3.47e-29 | 25 |
leukocyte | 2.55e-22 | 136 |
nongranular leukocyte | 4.76e-18 | 115 |
lymphoid lineage restricted progenitor cell | 8.86e-18 | 52 |
lymphocyte | 2.38e-17 | 53 |
common lymphoid progenitor | 2.38e-17 | 53 |
hematopoietic stem cell | 2.55e-16 | 168 |
hematopoietic cell | 4.99e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 2.79e-14 | 120 |
hematopoietic oligopotent progenitor cell | 6.49e-14 | 161 |
hematopoietic multipotent progenitor cell | 6.49e-14 | 161 |
CD4-positive, alpha-beta T cell | 1.26e-12 | 6 |
natural killer cell | 3.41e-11 | 3 |
pro-NK cell | 3.41e-11 | 3 |
basophil | 1.04e-10 | 3 |
granulocyte | 1.88e-10 | 8 |
single nucleate cell | 2.64e-10 | 3 |
mononuclear cell | 2.64e-10 | 3 |
eosinophil | 5.82e-08 | 2 |
blood cell | 1.74e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 7.44e-24 | 15 |
haemolymphatic fluid | 7.44e-24 | 15 |
organism substance | 7.44e-24 | 15 |
hematopoietic system | 9.78e-12 | 98 |
blood island | 9.78e-12 | 98 |
hemolymphoid system | 3.92e-10 | 108 |