FFCP PHASE1:Hg19::chr10:129705063..129705077,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5791 | |EntrezGene=5791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9669 | |HGNC=9669 | ||
|TSSclassifier=strong | |||
|UniProt=P23469,Q5VWH4,Q96P81 | |UniProt=P23469,Q5VWH4,Q96P81 | ||
|association_with_transcript=-247bp_to_ENST00000254667,NM_006504,uc001lkb.2,uc009yat.2_5end | |association_with_transcript=-247bp_to_ENST00000254667,NM_006504,uc001lkb.2,uc009yat.2_5end | ||
|cluster_id=chr10:129705063..129705077,+ | |||
|coexpression_cluster_id=C2987 | |coexpression_cluster_id=C2987 | ||
|description=CAGE_peak_13_at_PTPRE_5end | |description=CAGE_peak_13_at_PTPRE_5end | ||
|id=chr10:129705063..129705077,+ | |id=chr10:129705063..129705077,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.29e-08!254;CL:0002251!4.21e-07!21 | |ontology_enrichment_celltype=CL:0000066!4.29e-08!254;CL:0002251!4.21e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.10e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.10e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;3.58e-26;1!DOID:1357;3.58e-26;1!DOID:3493;7.30e-14;2!DOID:4929;1.29e-13;2!DOID:299;1.35e-09;25!DOID:3119;4.57e-08;14!DOID:5409;1.31e-07;4!DOID:0050615;3.14e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.58e-26,1;DOID:1357,3.58e-26,1;DOID:3493,7.30e-14,2;DOID:4929,1.21e-13,2;DOID:299,1.28e-09,25;DOID:3119,4.49e-08,14;DOID:5409,1.31e-07,4;DOID:0050615,3.14e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.38e-11!169;UBERON:0000925!1.38e-11!169;UBERON:0006595!1.38e-11!169;UBERON:0005911!1.46e-11!82;UBERON:0001007!4.11e-10!155;UBERON:0001555!4.11e-10!155;UBERON:0007026!4.11e-10!155;UBERON:0005409!1.76e-09!35;UBERON:0004921!3.78e-09!129;UBERON:0004185!3.78e-09!129;UBERON:0002294!3.70e-08!7;UBERON:0001173!3.70e-08!7;UBERON:0004912!3.70e-08!7;UBERON:0000077!3.63e-07!130;UBERON:0000160!7.85e-07!27;UBERON:0000060!8.65e-07!12 | |ontology_enrichment_uberon=UBERON:0004119!1.38e-11!169;UBERON:0000925!1.38e-11!169;UBERON:0006595!1.38e-11!169;UBERON:0005911!1.46e-11!82;UBERON:0001007!4.11e-10!155;UBERON:0001555!4.11e-10!155;UBERON:0007026!4.11e-10!155;UBERON:0005409!1.76e-09!35;UBERON:0004921!3.78e-09!129;UBERON:0004185!3.78e-09!129;UBERON:0002294!3.70e-08!7;UBERON:0001173!3.70e-08!7;UBERON:0004912!3.70e-08!7;UBERON:0000077!3.63e-07!130;UBERON:0000160!7.85e-07!27;UBERON:0000060!8.65e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;3.58e-26;1!UBERON:0001825;3.58e-26;1!UBERON:0004913;8.64e-26;1!UBERON:0003703;8.64e-26;1!UBERON:0001174;8.64e-26;1!UBERON:0004914;8.64e-26;1!UBERON:0002108;1.04e-20;4!UBERON:0005409;1.19e-17;22!UBERON:0000160;5.04e-13;17!UBERON:0004921;3.78e-12;33!UBERON:0002114;1.60e-09;2!UBERON:0002394;1.86e-07;4!UBERON:0003928;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.58e-26,1;UBERON:0001825,3.58e-26,1;UBERON:0004913,7.62e-26,1;UBERON:0003703,7.62e-26,1;UBERON:0001174,7.62e-26,1;UBERON:0004914,7.62e-26,1;UBERON:0002108,9.93e-21,4;UBERON:0005409,1.17e-15,25;UBERON:0000160,5.25e-13,17;UBERON:0002114,1.54e-09,2 | |||
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| ||
|short_description=p13@PTPRE | |short_description=p13@PTPRE | ||
}} | }} |
Latest revision as of 01:28, 17 September 2015
Short description: | p13@PTPRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PTPRE_5end |
Coexpression cluster: | C2987_small_maxillary_signet_gall_neuroectodermal_neuroepithelioma_acute |
Association with transcript: | -247bp_to_ENST00000254667, NM_006504, uc001lkb.2, uc009yat.2_5end |
EntrezGene: | PTPRE |
HGNC: | 9669 |
UniProt: | P23469Q5VWH4Q96P81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.10e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.58e-26 | 1 |
paranasal sinus | 3.58e-26 | 1 |
hepatopancreatic ampulla | 7.62e-26 | 1 |
extrahepatic bile duct | 7.62e-26 | 1 |
common bile duct | 7.62e-26 | 1 |
duodenal papilla | 7.62e-26 | 1 |
small intestine | 9.93e-21 | 4 |
gastrointestinal system | 1.17e-15 | 25 |
intestine | 5.25e-13 | 17 |
duodenum | 1.54e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.58e-26 | 1 |
maxillary sinus cancer | 3.58e-26 | 1 |
signet ring cell adenocarcinoma | 7.30e-14 | 2 |
tubular adenocarcinoma | 1.21e-13 | 2 |
adenocarcinoma | 1.28e-09 | 25 |
gastrointestinal system cancer | 4.49e-08 | 14 |
lung small cell carcinoma | 1.31e-07 | 4 |
respiratory system cancer | 3.14e-07 | 16 |