FFCP PHASE1:Hg19::chr11:46665179..46665183,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:46665179..46665183,+ | |||
|description=CAGE_peak_at_chr11:46665179..46665183,+ | |description=CAGE_peak_at_chr11:46665179..46665183,+ | ||
|id=chr11:46665179..46665183,+ | |id=chr11:46665179..46665183,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.77e-08!172;CL:0000566!2.77e-08!172;CL:0000988!8.29e-08!182;CL:0002032!8.82e-07!165;CL:0000837!8.82e-07!165 | |ontology_enrichment_celltype=CL:0000037!2.77e-08!172;CL:0000566!2.77e-08!172;CL:0000988!8.29e-08!182;CL:0002032!8.82e-07!165;CL:0000837!8.82e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.02e-18;18!CL:0000789;1.02e-18;18!CL:0002419;1.02e-18;18!CL:0000624;5.82e-15;6!CL:0000775;3.88e-14;3!CL:0000084;2.27e-13;25!CL:0000625;2.10e-08;11!CL:0000542;7.48e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.75e-19,18;CL:0000789,8.75e-19,18;CL:0002420,8.75e-19,18;CL:0002419,8.75e-19,18;CL:0000790,8.75e-19,18;CL:0000624,6.12e-15,6;CL:0000775,3.64e-14,3;CL:0000084,2.04e-13,25;CL:0000827,2.04e-13,25;CL:0000838,8.61e-11,52;CL:0000542,1.44e-10,53;CL:0000051,1.44e-10,53;CL:0000625,1.81e-08,11;CL:0000738,8.67e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;1.02e-18;18!CL:0000051;7.48e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002308!6.68e-07!9;UBERON:0000125!6.68e-07!9 | |ontology_enrichment_uberon=UBERON:0002308!6.68e-07!9;UBERON:0000125!6.68e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002038;8.61e-11;1!UBERON:0002171;8.61e-11;1!UBERON:0009661;8.61e-11;1!UBERON:0006518;8.61e-11;1!UBERON:0008949;8.61e-11;1!UBERON:0002950;8.61e-11;1!UBERON:0000101;8.61e-11;1!UBERON:0001891;8.61e-11;1!UBERON:0002167;8.61e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,9.05e-11,1;UBERON:0006518,9.05e-11,1;UBERON:0008949,9.05e-11,1;UBERON:0000101,9.05e-11,1;UBERON:0002167,9.05e-11,1;UBERON:0002038,1.77e-10,1;UBERON:0009661,1.77e-10,1;UBERON:0002950,1.77e-10,1;UBERON:0001891,1.77e-10,1;UBERON:0009616,1.77e-10,1;UBERON:0010286,1.77e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.383829398097213,0,0,0,0,0,0,0.293600439334847,0.553995408531877,1.60435557976113,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0.502497330513487,0,0,0,0,0,0,0.850417199860174,0,0.22465726229299,0,0,0.285012743741249,0.39783335439818,0.365328307529268,0,0.546138611262131,0,0,0,0.574752439954483,0.661044872784862,0,1.1384259382189,0,0.382273228125229,0,0,0.263384084775077,2.16380747125216,1.96505381374582,1.02800749499755,0,0.32592226663359,1.89379122293893,0,0,0,0.443067789167242,0,0.25618263945135,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0.766440987203842,0.68725489096526,0,0,0,0,0,0.127986611154418,0,0,0,1.41124720257313,1.33720097891754,2.31719046212478,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.523916301990851,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0.394061520403854,1.72502059887614,0.77005821767849,0,0,0,0,0.637938751653163,2.24702107184155,2.99161459204025,0.414415513436035,0,0,0,0,0.178428988797162,0.473107245101804,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,1.0457418040996,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0.423347165447766,0,0,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.333926115068718,0,0,0,0,0,0.20453736500431,0,0,0.179736702294654,0.358042349351218,0.511572370226872,0,0,0,0.969332746095218,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.202203398942031,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0.126621591911757,0,0.160317640503067,0.213452994739353,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0,0,2.32991899054908,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0,0.314408610199332,1.24271716604159,0,0,0.365377795142688,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0.163565394255844,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.0691572524642179,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0.523813388962845,0.163771917510097,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0.316027223465453,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0.955538938977433,0.223710863595585,0.098150233615243,0,0.647428837187895,0,0,0.485710993059139,0,0.198950775161368,0.237840181555137,0,0.109940516745429,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0.0802413666891683,0,0,1.00337708206016,0,0,0,0,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0,0.250707539292375,1.28823786971007,1.07185652062471,0,0.310298987585686,0,0,0.0645889098360061,0,0.224263725161227,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.383829398097213,0,0,0,0,0,0,0.293600439334847,0.553995408531877,1.60435557976113,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0.502497330513487,0,0,0,0,0,0,0.850417199860174,0,0.22465726229299,0,0,0.285012743741249,0.39783335439818,0.365328307529268,0,0.546138611262131,0,0,0,0.574752439954483,0.661044872784862,0,1.1384259382189,0,0.382273228125229,0,0,0.263384084775077,2.16380747125216,1.96505381374582,1.02800749499755,0,0.32592226663359,1.89379122293893,0,0,0,0.443067789167242,0,0.25618263945135,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0.766440987203842,0.68725489096526,0,0,0,0,0,0.127986611154418,0,0,0,1.41124720257313,1.33720097891754,2.31719046212478,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.523916301990851,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0.394061520403854,1.72502059887614,0.77005821767849,0,0,0,0,0.637938751653163,2.24702107184155,2.99161459204025,0.414415513436035,0,0,0,0,0.178428988797162,0.473107245101804,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,1.0457418040996,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0.423347165447766,0,0,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.333926115068718,0,0,0,0,0,0.20453736500431,0,0,0.179736702294654,0.358042349351218,0.511572370226872,0,0,0,0.969332746095218,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.202203398942031,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0.126621591911757,0,0.160317640503067,0.213452994739353,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0,0,2.32991899054908,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0,0.314408610199332,1.24271716604159,0,0,0.365377795142688,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0.163565394255844,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.0691572524642179,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0.523813388962845,0.163771917510097,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0.316027223465453,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0.955538938977433,0.223710863595585,0.098150233615243,0,0.647428837187895,0,0,0.485710993059139,0,0.198950775161368,0.237840181555137,0,0.109940516745429,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0.0802413666891683,0,0,1.00337708206016,0,0,0,0,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0,0.250707539292375,1.28823786971007,1.07185652062471,0,0.310298987585686,0,0,0.0645889098360061,0,0.224263725161227,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr11:46665179..46665183,+ | |short_description=p@chr11:46665179..46665183,+ | ||
}} | }} |
Latest revision as of 22:29, 23 July 2015
Short description: | p@chr11:46665179..46665183, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:46665179..46665183, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.75e-19 | 18 |
alpha-beta T cell | 8.75e-19 | 18 |
immature T cell | 8.75e-19 | 18 |
mature T cell | 8.75e-19 | 18 |
immature alpha-beta T cell | 8.75e-19 | 18 |
CD4-positive, alpha-beta T cell | 6.12e-15 | 6 |
neutrophil | 3.64e-14 | 3 |
T cell | 2.04e-13 | 25 |
pro-T cell | 2.04e-13 | 25 |
lymphoid lineage restricted progenitor cell | 8.61e-11 | 52 |
lymphocyte | 1.44e-10 | 53 |
common lymphoid progenitor | 1.44e-10 | 53 |
CD8-positive, alpha-beta T cell | 1.81e-08 | 11 |
leukocyte | 8.67e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 9.05e-11 | 1 |
right lung lobe | 9.05e-11 | 1 |
lower lobe of lung | 9.05e-11 | 1 |
lobe of lung | 9.05e-11 | 1 |
right lung | 9.05e-11 | 1 |
substantia nigra | 1.77e-10 | 1 |
midbrain nucleus | 1.77e-10 | 1 |
regional part of midbrain | 1.77e-10 | 1 |
midbrain | 1.77e-10 | 1 |
presumptive midbrain | 1.77e-10 | 1 |
midbrain neural tube | 1.77e-10 | 1 |