FFCP PHASE1:Hg19::chr1:204381010..204381023,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:204381010..204381023,-
|short_description=p2@PPP1R15B
|description=CAGE_peak_2_at_PPP1R15B_5end
|association_with_transcript=-65bp_to_ENST00000543650_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84919 | |EntrezGene=84919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14951 | |HGNC=14951 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5C9 | |UniProt=F5H5C9 | ||
|association_with_transcript=-65bp_to_ENST00000543650_5end | |||
|cluster_id=chr1:204381010..204381023,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_PPP1R15B_5end | |||
|id=chr1:204381010..204381023,- | |||
|ontology_enrichment_celltype=CL:0000860!1.50e-21!45;CL:0002057!4.86e-20!42;CL:0000766!4.30e-17!76;CL:0000738!4.44e-15!140;CL:0000557!1.95e-14!71;CL:0000839!8.49e-14!70;CL:0002009!1.65e-12!65;CL:0002194!7.70e-12!63;CL:0000576!7.70e-12!63;CL:0000040!7.70e-12!63;CL:0000559!7.70e-12!63;CL:0002031!2.66e-11!124;CL:0000037!5.02e-11!172;CL:0000566!5.02e-11!172;CL:0000763!9.21e-11!112;CL:0000049!9.21e-11!112;CL:0002087!5.71e-10!119;CL:0002032!1.08e-09!165;CL:0000837!1.08e-09!165;CL:0000988!5.40e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.55e-20;33!CL:0002057;7.55e-20;33!CL:0000473;3.80e-12;39!CL:0000234;3.80e-12;39!CL:0000576;1.36e-11;48!CL:0000766;3.13e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.31e-22,42;CL:0002057,1.31e-22,42;CL:0000766,2.75e-17,72;CL:0000473,3.47e-17,48;CL:0000234,3.47e-17,48;CL:0000738,1.07e-14,136;CL:0000557,2.80e-14,67;CL:0000839,1.46e-13,66;CL:0002009,4.33e-12,61;CL:0000037,2.45e-11,168;CL:0002194,2.46e-11,59;CL:0000576,2.46e-11,59;CL:0000040,2.46e-11,59;CL:0000559,2.46e-11,59;CL:0002031,3.06e-11,120;CL:0000763,4.76e-11,108;CL:0000049,4.76e-11,108;CL:0002032,4.89e-10,161;CL:0000837,4.89e-10,161;CL:0002087,9.23e-10,115;CL:0000988,1.15e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-16;42 | |||
|ontology_enrichment_disease=DOID:305!2.26e-14!106;DOID:0050687!4.46e-14!143;DOID:162!7.37e-10!235;DOID:14566!6.27e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.21e-13,106;DOID:0050687,8.50e-13,143;DOID:162,3.96e-08,235;DOID:14566,2.77e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.02e-12!102;UBERON:0003061!2.02e-12!102;UBERON:0002371!9.43e-12!80;UBERON:0002405!3.32e-11!115;UBERON:0001474!1.23e-10!86;UBERON:0002193!5.16e-10!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.56e-12,76;UBERON:0002390,8.62e-12,98;UBERON:0003061,8.62e-12,98;UBERON:0001474,3.75e-11,82;UBERON:0002405,5.14e-10,93;UBERON:0002193,7.74e-10,108;UBERON:0004765,2.10e-08,90 | |||
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| ||
|short_description=p2@PPP1R15B | |||
}} | }} |
Latest revision as of 01:03, 20 September 2015
Short description: | p2@PPP1R15B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPP1R15B_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -65bp_to_ENST00000543650_5end |
EntrezGene: | PPP1R15B |
HGNC: | 14951 |
UniProt: | F5H5C9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.31e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.31e-22 | 42 |
myeloid leukocyte | 2.75e-17 | 72 |
defensive cell | 3.47e-17 | 48 |
phagocyte | 3.47e-17 | 48 |
leukocyte | 1.07e-14 | 136 |
granulocyte monocyte progenitor cell | 2.80e-14 | 67 |
myeloid lineage restricted progenitor cell | 1.46e-13 | 66 |
macrophage dendritic cell progenitor | 4.33e-12 | 61 |
hematopoietic stem cell | 2.45e-11 | 168 |
monopoietic cell | 2.46e-11 | 59 |
monocyte | 2.46e-11 | 59 |
monoblast | 2.46e-11 | 59 |
promonocyte | 2.46e-11 | 59 |
hematopoietic lineage restricted progenitor cell | 3.06e-11 | 120 |
myeloid cell | 4.76e-11 | 108 |
common myeloid progenitor | 4.76e-11 | 108 |
hematopoietic oligopotent progenitor cell | 4.89e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.89e-10 | 161 |
nongranular leukocyte | 9.23e-10 | 115 |
hematopoietic cell | 1.15e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.56e-12 | 76 |
hematopoietic system | 8.62e-12 | 98 |
blood island | 8.62e-12 | 98 |
bone element | 3.75e-11 | 82 |
immune system | 5.14e-10 | 93 |
hemolymphoid system | 7.74e-10 | 108 |
skeletal element | 2.10e-08 | 90 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.21e-13 | 106 |
cell type cancer | 8.50e-13 | 143 |
cancer | 3.96e-08 | 235 |
disease of cellular proliferation | 2.77e-07 | 239 |