FFCP PHASE1:Hg19::chr1:204494364..204494380,+: Difference between revisions
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|id=chr1:204494364..204494380,+
|short_description=p6@MDM4
|description=CAGE_peak_6_at_MDM4_5end
|association_with_transcript=0bp_to_uc009xbe.1_5end
|EntrezGene=41...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4194 | |EntrezGene=4194 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6974 | |HGNC=6974 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009xbe.1_5end | |||
|cluster_id=chr1:204494364..204494380,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_6_at_MDM4_5end | |||
|id=chr1:204494364..204494380,+ | |||
|ontology_enrichment_celltype=CL:0000039!4.76e-17!7;CL:0000586!4.76e-17!7;CL:0000945!3.19e-07!24;CL:0000826!3.19e-07!24 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;7.05e-34;2!UBERON:0004872;9.89e-11;7!UBERON:0006603;9.36e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!8.34e-09!8;UBERON:0002370!1.53e-08!4;UBERON:0005058!1.53e-08!4;UBERON:0009113!1.53e-08!4;UBERON:0003295!1.53e-08!4;UBERON:0005562!1.53e-08!4;UBERON:0002372!2.46e-08!1;UBERON:0001961!2.46e-08!1;UBERON:0001744!2.46e-08!1;UBERON:0001735!2.46e-08!1;UBERON:0000974!2.80e-07!10;UBERON:0001042!3.47e-07!10;UBERON:0009145!3.47e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.61e-131;2!UBERON:0005058;4.61e-131;2!UBERON:0009113;4.61e-131;2!UBERON:0004177;2.19e-53;5!UBERON:0005057;2.19e-53;5!UBERON:0000077;6.25e-11;27!UBERON:0002405;6.25e-11;27!UBERON:0001638;1.21e-08;9!UBERON:0003920;1.21e-08;9!UBERON:0004582;1.21e-08;9!UBERON:0002390;2.43e-07;32!UBERON:0002368;2.43e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.40e-66,4;UBERON:0005058,2.40e-66,4;UBERON:0009113,2.40e-66,4;UBERON:0003295,2.40e-66,4;UBERON:0005562,2.40e-66,4;UBERON:0003351,9.76e-45,6;UBERON:0004177,1.49e-38,7;UBERON:0005057,1.49e-38,7;UBERON:0000974,2.08e-27,10;UBERON:0003408,2.08e-27,10;UBERON:0001042,2.08e-27,10;UBERON:0009145,2.08e-27,10;UBERON:0006562,4.86e-25,11;UBERON:0009722,4.86e-25,11;UBERON:0007690,4.86e-25,11;UBERON:0008814,8.40e-16,18;UBERON:0001557,4.91e-15,19;UBERON:0004807,1.40e-10,28;UBERON:0000077,2.96e-10,29;UBERON:0002368,1.09e-08,35;UBERON:0001638,1.21e-08,9;UBERON:0003920,1.21e-08,9;UBERON:0004582,1.21e-08,9;UBERON:0000949,5.42e-07,45;UBERON:0000072,9.72e-07,47 | |||
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|short_description=p6@MDM4 | |||
}} | }} |
Latest revision as of 01:31, 20 September 2015
Short description: | p6@MDM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MDM4_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_uc009xbe.1_5end |
EntrezGene: | MDM4 |
HGNC: | 6974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.40e-66 | 4 |
hemolymphoid system gland | 2.40e-66 | 4 |
thymic region | 2.40e-66 | 4 |
pharyngeal gland | 2.40e-66 | 4 |
thymus primordium | 2.40e-66 | 4 |
pharyngeal epithelium | 9.76e-45 | 6 |
hemopoietic organ | 1.49e-38 | 7 |
immune organ | 1.49e-38 | 7 |
neck | 2.08e-27 | 10 |
gland of gut | 2.08e-27 | 10 |
chordate pharynx | 2.08e-27 | 10 |
pharyngeal region of foregut | 2.08e-27 | 10 |
pharynx | 4.86e-25 | 11 |
entire pharyngeal arch endoderm | 4.86e-25 | 11 |
early pharyngeal endoderm | 4.86e-25 | 11 |
pharyngeal arch system | 8.40e-16 | 18 |
upper respiratory tract | 4.91e-15 | 19 |
respiratory system epithelium | 1.40e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 2.96e-10 | 29 |
endocrine gland | 1.09e-08 | 35 |
vein | 1.21e-08 | 9 |
venous blood vessel | 1.21e-08 | 9 |
venous system | 1.21e-08 | 9 |
endocrine system | 5.42e-07 | 45 |
segment of respiratory tract | 9.72e-07 | 47 |