FFCP PHASE1:Hg19::chr6:55739542..55739562,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=100bp_to_AB527577,CU693346_5end | |association_with_transcript=100bp_to_AB527577,CU693346_5end | ||
|cluster_id=chr6:55739542..55739562,- | |||
|coexpression_cluster_id=C2864 | |coexpression_cluster_id=C2864 | ||
|description=CAGE_peak_3_at_AB527577_5end,CAGE_peak_3_at_CU693346_5end | |description=CAGE_peak_3_at_AB527577_5end,CAGE_peak_3_at_CU693346_5end | ||
|id=chr6:55739542..55739562,- | |id=chr6:55739542..55739562,- | ||
|ontology_enrichment_celltype=CL:0002150!1.36e-08!3;CL:0000861!1.36e-08!3;CL:0000188!2.05e-08!9;CL:0000594!2.68e-07!3 | |ontology_enrichment_celltype=CL:0002150!1.36e-08!3;CL:0000861!1.36e-08!3;CL:0000188!2.05e-08!9;CL:0000594!2.68e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.06e-23;1!UBERON:0010227;2.93e-23;1!UBERON:0008947;1.76e-07;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-23!115;UBERON:0002298!4.73e-10!8;UBERON:0000481!1.58e-07!347;UBERON:0001896!1.73e-07!3;UBERON:0005290!1.73e-07!3;UBERON:0010096!1.73e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.20e-23!115;UBERON:0002298!4.73e-10!8;UBERON:0000481!1.58e-07!347;UBERON:0001896!1.73e-07!3;UBERON:0005290!1.73e-07!3;UBERON:0010096!1.73e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.93e-23;1!UBERON:0002171;2.93e-23;1!UBERON:0002426;2.93e-23;1!UBERON:0003831;2.93e-23;1!UBERON:0003898;2.93e-23;1!UBERON:0004830;2.93e-23;1!UBERON:0006518;2.93e-23;1!UBERON:0008949;2.93e-23;1!UBERON:0003830;2.93e-23;1!UBERON:0005175;2.93e-23;1!UBERON:0001774;2.93e-23;1!UBERON:0000101;2.93e-23;1!UBERON:0001103;2.93e-23;1!UBERON:0002167;2.93e-23;1!UBERON:0000922;1.99e-12;49!UBERON:0003127;2.45e-12;2!UBERON:0005090;2.45e-12;2!UBERON:0001630;2.45e-12;2!UBERON:0002081;2.45e-12;2!UBERON:0005181;8.48e-09;35!UBERON:0000988;1.17e-08;3!UBERON:0004151;1.17e-08;3!UBERON:0002114;1.17e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,2.10e-23,1;UBERON:0003831,2.10e-23,1;UBERON:0003898,2.10e-23,1;UBERON:0004830,2.10e-23,1;UBERON:0003830,2.10e-23,1;UBERON:0005175,2.10e-23,1;UBERON:0001774,2.10e-23,1;UBERON:0001103,2.10e-23,1;UBERON:0010084,2.10e-23,1;UBERON:0002079,3.28e-23,1;UBERON:0002171,4.10e-23,1;UBERON:0006518,4.10e-23,1;UBERON:0008949,4.10e-23,1;UBERON:0000101,4.10e-23,1;UBERON:0002167,4.10e-23,1;UBERON:0003127,1.65e-12,2;UBERON:0005090,2.07e-12,2;UBERON:0001630,2.07e-12,2;UBERON:0002081,2.59e-12,2;UBERON:0010227,2.59e-12,2;UBERON:0005181,1.58e-10,35;UBERON:0002114,1.12e-08,2;UBERON:0004151,1.21e-08,3;UBERON:0000988,1.51e-08,3;UBERON:0000915,3.39e-07,52 | |||
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| ||
|short_description=p3@AB527577,p3@CU693346 | |short_description=p3@AB527577,p3@CU693346 | ||
}} | }} |
Latest revision as of 02:27, 31 July 2015
Short description: | p3@AB527577, p3@CU693346 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AB527577_5end, CAGE_peak_3_at_CU693346_5end |
Coexpression cluster: | C2864_heart_lung_trachea_pons_synovial_umbilical_maxillary |
Association with transcript: | 100bp_to_AB527577, CU693346_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chest muscle | 2.10e-23 | 1 |
respiratory system muscle | 2.10e-23 | 1 |
skeletal muscle of trunk | 2.10e-23 | 1 |
respiratory system skeletal muscle | 2.10e-23 | 1 |
thoracic segment muscle | 2.10e-23 | 1 |
chest organ | 2.10e-23 | 1 |
muscle of trunk | 2.10e-23 | 1 |
diaphragm | 2.10e-23 | 1 |
future diaphragm | 2.10e-23 | 1 |
left cardiac atrium | 3.28e-23 | 1 |
lower lobe of right lung | 4.10e-23 | 1 |
right lung lobe | 4.10e-23 | 1 |
lower lobe of lung | 4.10e-23 | 1 |
lobe of lung | 4.10e-23 | 1 |
right lung | 4.10e-23 | 1 |
open tracheal system trachea | 1.65e-12 | 2 |
muscle structure | 2.07e-12 | 2 |
muscle organ | 2.07e-12 | 2 |
cardiac atrium | 2.59e-12 | 2 |
future cardiac atrium | 2.59e-12 | 2 |
thoracic segment organ | 1.58e-10 | 35 |
duodenum | 1.12e-08 | 2 |
cardiac chamber | 1.21e-08 | 3 |
pons | 1.51e-08 | 3 |
thoracic segment of trunk | 3.39e-07 | 52 |