FFCP PHASE1:Hg19::chr1:206904484..206904510,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:206904484..206904510,+
|short_description=p6@MAPKAPK2
|description=CAGE_peak_6_at_MAPKAPK2_5end
|association_with_transcript=-122bp_to_ENST00000479009_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9261 | |EntrezGene=9261 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6887 | |HGNC=6887 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-122bp_to_ENST00000479009_5end | |||
|cluster_id=chr1:206904484..206904510,+ | |||
|coexpression_cluster_id=C99 | |||
|description=CAGE_peak_6_at_MAPKAPK2_5end | |||
|id=chr1:206904484..206904510,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.98e-16!42;CL:0000860!1.56e-14!45;CL:0000766!5.38e-10!76;CL:0002194!1.60e-09!63;CL:0000576!1.60e-09!63;CL:0000040!1.60e-09!63;CL:0000559!1.60e-09!63;CL:0002009!5.21e-09!65;CL:0000839!3.15e-08!70;CL:0000557!3.39e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.52e-38;33!CL:0002057;2.52e-38;33!CL:0000473;4.90e-26;39!CL:0000234;4.90e-26;39!CL:0000576;1.09e-18;48!CL:0000766;1.01e-12;69!CL:0000775;2.42e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.00e-34,42;CL:0002057,7.00e-34,42;CL:0000473,9.85e-29,48;CL:0000234,9.85e-29,48;CL:0000766,2.16e-25,72;CL:0002194,1.82e-23,59;CL:0000576,1.82e-23,59;CL:0000040,1.82e-23,59;CL:0000559,1.82e-23,59;CL:0002009,1.80e-22,61;CL:0000839,3.02e-20,66;CL:0000557,7.66e-20,67;CL:0000763,2.12e-15,108;CL:0000049,2.12e-15,108;CL:0000738,1.38e-12,136;CL:0002087,1.02e-10,115;CL:0000988,4.89e-10,177;CL:0002031,5.51e-10,120;CL:0000775,1.94e-09,3;CL:0000037,2.34e-09,168;CL:0002032,2.38e-09,161;CL:0000837,2.38e-09,161;CL:0000134,2.99e-07,354;CL:0002320,6.93e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.51e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-16,76;UBERON:0001474,5.75e-15,82;UBERON:0002405,1.26e-13,93;UBERON:0004765,4.83e-13,90;UBERON:0002390,1.41e-12,98;UBERON:0003061,1.41e-12,98;UBERON:0001434,3.62e-12,100;UBERON:0002193,7.72e-12,108;UBERON:0002204,8.43e-08,167;UBERON:0003081,1.48e-07,203 | |||
|phase1_expression=1.09007027562334,2.5692062866918,1.69145284915165,0,0.893922188854576,0.872338524100369,2.53299878168311,0,0.522371256399677,0.491467873003018,0.697801167972428,0,0,0.247532705920093,0,2.01697543935533,0,0.730310090387373,0.487932798790507,0,0.408001382488506,0.626909442956176,0,0.136874425072884,0.125542639594803,0.458480434487708,0.164201178899891,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,1.10926203050036,0.154934401160603,0.142169232487422,0,0,0.802177789880567,0,0,0.32389366601898,0.257575567634187,1.45398238779565,0.755751887377619,1.21292030593908,1.16214518452842,2.05583944010913,2.16794459626573,0.863077176966451,0.512321413058201,0.709446689665756,3.10271112662957,3.22742341791913,2.70852973188684,3.20011977222428,1.09162460023138,1.79778787556068,3.06083892370903,1.60464513538047,2.55734850319616,0.989553900560148,1.59570926097305,1.27867425159808,3.48251086354301,1.13477044938228,3.11411124497787,0.75374599577023,2.60741459210101,1.3031330682307,3.02699751316684,1.47311054395026,1.26584954976354,0.211255286311942,0.425208599930087,0.209658645508376,0.44931452458598,0.600707571366025,0.16072558669708,0,0.19891667719909,1.0959849225878,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0,1.17903228824749,0,0.167186495390678,0.32592226663359,0,1.94826728407911,0.334231370655521,0.589211814949674,0.886135578334485,0.270803863765016,0.25618263945135,0,0.164437904603676,0.276350017785848,0.869409257205157,0,0.267540828089713,0,0,0.383220493601921,0,0.506039384039006,0,0,0,0.752875595388864,0.255973222308837,0,0,0,0.604820229674197,0.534880391567015,0.434473211648397,0,0,0.12786256184353,0,0,0.724232594804119,0,0,0.378139268656271,0.221729397462564,0.263504357079378,0.523916301990851,0.364295288292542,0.741568885568859,0,0.174129737299267,0.26591592103773,1.19245312152671,1.14398982156026,0.74291500265913,0,0.860234595106124,0,1.13061588384802,0.419499436209906,0.550236083880135,0,0,0,0,1.20848795132744,0,1.70843440283719,0,0,0.357198913136319,0,0.112611480483322,0,0,0.366403487860815,1.31780417436063,0,0,0.496971951695318,0.886413581652058,0.132409180813219,0.573673241497627,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0.163461903113459,0.454072282934794,0,0.234321431833797,0.312160076830321,0,0.896692083310806,0.352303495931295,0.485618833104395,0.140450806702248,0,0.122834317311768,0.103325781175765,2.37600571456411,1.23633464639278,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.300476117813194,0,0.538168907066586,0,0,0,0.515262646192195,0,0.18611685633159,0,0.194874010322397,0,0.276149695926898,1.13152239773168,0.355009592516614,0.403008392910561,0,0,0,0.286804595389004,0.609868530647977,0.132529768321485,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0.643240938192885,1.38134921352481,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.55146986366197,0.217879444092406,0,0.404493924480493,0,0,0.738155454624648,0,0,0,0,0.982827216677626,0.590789906681404,0.441463099414651,0.122988438543114,0,0.439001141634502,1.1240175325762,0.100528972411631,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.231860809950154,0,0.577465791044295,0.462985512576611,0.380508304469197,0.790204397959275,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0.839910640994298,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.528290604079356,0.207328115540772,0.288239906833923,0.12624243342638,0.126995788584338,0.763976851116555,0,3.4214489204541,0.205654985406647,0,0,0.336393253036082,0,0.1466765716419,0.129271715757778,0,0.845302752556,0.531876233169741,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0.602878754119172,0.871533458600294,0.299918973546171,0,0,0,0,2.29723871668228,0,0.144781306667579,0,0.358121926479791,0.112085143993527,0.197030760201927,0.431255149719035,0.256686072559497,0.508189248444927,0,0.773288812777695,0,0,2.99602809578873,2.99161459204025,2.07207756718018,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0.117141414992713,0.300946099727719,2.27407504055985,1.03473071292505,0.664225598535437,0.184369168541703,0.781952530212746,0,0.343143423810856,0,0,0.640365346820666,0.303127571446259,1.66435439510497,0,1.73675465473144,0.153461973288062,0.561320188866147,0.896974044789907,0,0.965123526861645,0,0.462629081407967,0.887808626565635,0.0821271560138091,0.519254429183621,0,0.725156697549733,0.802025881213139,0.460404944679482,0.459257792658427,0.364182336013434,0.917870904715969,0.902399225814824,0.308061348417659,0,0,0.211103257785751,1.13733384070897,0.340187410553031,0,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0.650756789328606,0.515205058238611,0.366277859273374,0,0,0,0,0.48335359146061,0.462145851343933,0.767518373630648,0.413509717453592,0.107420244868274,0,0.426133137080504,0.445160178233687,0.330569830721956,0.192190067365106,0,0.30347334256665,0.929691098594572,0.31481234683064,0,0.616067160352178,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| ||
|short_description=p6@MAPKAPK2 | |||
}} | }} |
Latest revision as of 05:45, 20 September 2015
Short description: | p6@MAPKAPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MAPKAPK2_5end |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | -122bp_to_ENST00000479009_5end |
EntrezGene: | MAPKAPK2 |
HGNC: | 6887 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.00e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.00e-34 | 42 |
defensive cell | 9.85e-29 | 48 |
phagocyte | 9.85e-29 | 48 |
myeloid leukocyte | 2.16e-25 | 72 |
monopoietic cell | 1.82e-23 | 59 |
monocyte | 1.82e-23 | 59 |
monoblast | 1.82e-23 | 59 |
promonocyte | 1.82e-23 | 59 |
macrophage dendritic cell progenitor | 1.80e-22 | 61 |
myeloid lineage restricted progenitor cell | 3.02e-20 | 66 |
granulocyte monocyte progenitor cell | 7.66e-20 | 67 |
myeloid cell | 2.12e-15 | 108 |
common myeloid progenitor | 2.12e-15 | 108 |
leukocyte | 1.38e-12 | 136 |
nongranular leukocyte | 1.02e-10 | 115 |
hematopoietic cell | 4.89e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 5.51e-10 | 120 |
neutrophil | 1.94e-09 | 3 |
hematopoietic stem cell | 2.34e-09 | 168 |
hematopoietic oligopotent progenitor cell | 2.38e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.38e-09 | 161 |
mesenchymal cell | 2.99e-07 | 354 |
connective tissue cell | 6.93e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.11e-16 | 76 |
bone element | 5.75e-15 | 82 |
immune system | 1.26e-13 | 93 |
skeletal element | 4.83e-13 | 90 |
hematopoietic system | 1.41e-12 | 98 |
blood island | 1.41e-12 | 98 |
skeletal system | 3.62e-12 | 100 |
hemolymphoid system | 7.72e-12 | 108 |
musculoskeletal system | 8.43e-08 | 167 |
lateral plate mesoderm | 1.48e-07 | 203 |