FFCP PHASE1:Hg19::chr9:132641140..132641158,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10868 | |EntrezGene=10868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12619 | |HGNC=12619 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-493bp_to_ENST00000472108_5end | |association_with_transcript=-493bp_to_ENST00000472108_5end | ||
|cluster_id=chr9:132641140..132641158,+ | |||
|description=CAGE_peak_4_at_USP20_5end | |description=CAGE_peak_4_at_USP20_5end | ||
|id=chr9:132641140..132641158,+ | |id=chr9:132641140..132641158,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002202;6.77e-08;9!CL:0002632;6.77e-08;9 | |ontology_enrichment_celltype_v019=CL:0002202;6.77e-08;9!CL:0002632;6.77e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002202,7.01e-08,9;CL:0002632,7.01e-08,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.53e-16;1!UBERON:0000026;1.53e-16;1!UBERON:0008784;1.53e-16;1!UBERON:0006058;1.53e-16;1!UBERON:0003663;1.53e-16;1!UBERON:0004256;1.53e-16;1!UBERON:0004708;1.53e-16;1!UBERON:0002101;1.53e-16;1!UBERON:0004709;1.53e-16;1!UBERON:0002529;1.53e-16;1!UBERON:0010538;1.53e-16;1!UBERON:0003661;1.53e-16;1!UBERON:0010890;1.53e-16;1!UBERON:0002471;1.53e-16;1!UBERON:0001383;1.53e-16;1!UBERON:0010758;1.53e-16;1!UBERON:0010707;1.53e-16;1!UBERON:0000978;1.53e-16;1!UBERON:0002103;1.53e-16;1!UBERON:0001665;1.53e-16;1!UBERON:0003823;1.53e-16;1!UBERON:0000154;1.53e-16;1!UBERON:0010709;1.53e-16;1!UBERON:0005090;6.17e-09;2!UBERON:0001630;6.17e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0001389;1.53e-16;1!UBERON:0000026;1.53e-16;1!UBERON:0008784;1.53e-16;1!UBERON:0006058;1.53e-16;1!UBERON:0003663;1.53e-16;1!UBERON:0004256;1.53e-16;1!UBERON:0004708;1.53e-16;1!UBERON:0002101;1.53e-16;1!UBERON:0004709;1.53e-16;1!UBERON:0002529;1.53e-16;1!UBERON:0010538;1.53e-16;1!UBERON:0003661;1.53e-16;1!UBERON:0010890;1.53e-16;1!UBERON:0002471;1.53e-16;1!UBERON:0001383;1.53e-16;1!UBERON:0010758;1.53e-16;1!UBERON:0010707;1.53e-16;1!UBERON:0000978;1.53e-16;1!UBERON:0002103;1.53e-16;1!UBERON:0001665;1.53e-16;1!UBERON:0003823;1.53e-16;1!UBERON:0000154;1.53e-16;1!UBERON:0010709;1.53e-16;1!UBERON:0005090;6.17e-09;2!UBERON:0001630;6.17e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.21e-16,1;UBERON:0001389,1.21e-16,1;UBERON:0000026,1.21e-16,1;UBERON:0008784,1.21e-16,1;UBERON:0006058,1.21e-16,1;UBERON:0003663,1.21e-16,1;UBERON:0004256,1.21e-16,1;UBERON:0004708,1.21e-16,1;UBERON:0002101,1.21e-16,1;UBERON:0004709,1.21e-16,1;UBERON:0002529,1.21e-16,1;UBERON:0010538,1.21e-16,1;UBERON:0003661,1.21e-16,1;UBERON:0010890,1.21e-16,1;UBERON:0002471,1.21e-16,1;UBERON:0001383,1.21e-16,1;UBERON:0004357,1.21e-16,1;UBERON:0004347,1.21e-16,1;UBERON:0005420,1.21e-16,1;UBERON:0005732,1.21e-16,1;UBERON:0010758,1.21e-16,1;UBERON:0010707,1.21e-16,1;UBERON:0000978,1.21e-16,1;UBERON:0002103,1.21e-16,1;UBERON:0001665,1.21e-16,1;UBERON:0003823,1.21e-16,1;UBERON:0000154,1.21e-16,1;UBERON:0010709,1.21e-16,1;UBERON:0005733,1.21e-16,1;UBERON:0005730,1.21e-16,1;UBERON:0005090,5.49e-09,2;UBERON:0001630,5.49e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0.261185628199839,0,0,0,0,0,0,1.34465029290355,0,0,0.487932798790507,0,0,4.07491137921514,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,4.06729411183466,0,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0,0.619412741790207,0,0.512321413058201,0,0.344745680736619,0,0,0,0.272906150057846,0,0.612167784741805,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0,0.434377689410233,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0.196709770113833,0,0,0.334372990781356,0,0,0,0,0.294605907474837,0,0.270803863765016,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0,0,0,0.370784442784429,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,2.5648244150257,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,3.7223371266318,0.168776332241266,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0.504641701751257,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0.901029173531752,0.571652865261156,0,0,0,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0.502257091432126,2.10833939483032,0,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0.167516265334349,3.18969375826582,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0.330569830721956,0.192190067365106,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.196498082026242,0,0,0,0,0,0,0,7.37332503089366,0,0,0,0,0.886860307073351,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,0,0,4.98948428582042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0.281338832821026,0.111308705022906,0,0,0,0,0.251932747854276,0.102268682502155,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0,0,0.164230914106418,0.193978032976839,0,0,0,0,0.126621591911757,0,0.160317640503067,0,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0.399358000997982,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0.272406812223151,0.160753148465019,0,0,0.449947783103001,0,0.0607495566580247,0,0.0788057072991982,0,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0.314108192500469,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0.453692771289717,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0.107410557042488,0,0.398095888698616,0,0.343395705182793,0,0,0.192619830407303,0,0.260994291965212,0,0.231522474323834,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0.655219697692825,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0.218419276384028,0.169732529954025,0,0,0.558644917973244,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0,0,0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| ||
|short_description=p4@USP20 | |short_description=p4@USP20 | ||
}} | }} |
Latest revision as of 23:43, 15 September 2015
Short description: | p4@USP20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_USP20_5end |
Coexpression cluster: | NA |
Association with transcript: | -493bp_to_ENST00000472108_5end |
EntrezGene: | USP20 |
HGNC: | 12619 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 7.01e-08 | 9 |
epithelial cell of lower respiratory tract | 7.01e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 1.21e-16 | 1 |
soleus muscle | 1.21e-16 | 1 |
appendage | 1.21e-16 | 1 |
lower limb segment | 1.21e-16 | 1 |
multi-limb segment region | 1.21e-16 | 1 |
hindlimb muscle | 1.21e-16 | 1 |
hindlimb zeugopod muscle | 1.21e-16 | 1 |
paired limb/fin | 1.21e-16 | 1 |
limb | 1.21e-16 | 1 |
pelvic appendage | 1.21e-16 | 1 |
limb segment | 1.21e-16 | 1 |
paired limb/fin segment | 1.21e-16 | 1 |
limb muscle | 1.21e-16 | 1 |
pelvic complex muscle | 1.21e-16 | 1 |
zeugopod | 1.21e-16 | 1 |
muscle of leg | 1.21e-16 | 1 |
paired limb/fin bud | 1.21e-16 | 1 |
limb bud | 1.21e-16 | 1 |
pelvic appendage bud | 1.21e-16 | 1 |
limb/fin field | 1.21e-16 | 1 |
subdivision of organism along appendicular axis | 1.21e-16 | 1 |
appendage girdle complex | 1.21e-16 | 1 |
leg | 1.21e-16 | 1 |
hindlimb | 1.21e-16 | 1 |
triceps surae | 1.21e-16 | 1 |
hindlimb zeugopod | 1.21e-16 | 1 |
posterior region of body | 1.21e-16 | 1 |
pelvic complex | 1.21e-16 | 1 |
limb field | 1.21e-16 | 1 |
hindlimb/pelvic fin field | 1.21e-16 | 1 |
muscle structure | 5.49e-09 | 2 |
muscle organ | 5.49e-09 | 2 |