FFCP PHASE1:Hg19::chr4:8204368..8204371,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:8204368..8204371,+ | |||
|coexpression_cluster_id=C419 | |coexpression_cluster_id=C419 | ||
|description=CAGE_peak_at_chr4:8204368..8204371,+ | |description=CAGE_peak_at_chr4:8204368..8204371,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.64e-17;25!CL:0000542;3.68e-09;53 | |ontology_enrichment_celltype_v019=CL:0000084;4.64e-17;25!CL:0000542;3.68e-09;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.64e-17,25;CL:0000827,4.64e-17,25;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000051;3.68e-09;53 | |ontology_enrichment_development_v019=CL:0000051;3.68e-09;53 | ||
|ontology_enrichment_disease=DOID:1909!1.21e-13!2 | |ontology_enrichment_disease=DOID:1909!1.21e-13!2 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.00e-13;8!DOID:1240;1.53e-08;39!DOID:2531;3.55e-08;51!DOID:0060083;3.55e-08;51 | |ontology_enrichment_disease_v019=DOID:1036;1.00e-13;8!DOID:1240;1.53e-08;39!DOID:2531;3.55e-08;51!DOID:0060083;3.55e-08;51 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,1.07e-13,8;DOID:1240,2.03e-11,39;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002370!8.66e-26!4;UBERON:0005058!8.66e-26!4;UBERON:0009113!8.66e-26!4;UBERON:0003295!8.66e-26!4;UBERON:0005562!8.66e-26!4;UBERON:0003351!1.44e-17!6;UBERON:0004177!3.29e-15!7;UBERON:0000974!5.98e-11!10;UBERON:0003408!5.98e-11!10;UBERON:0001042!5.98e-11!10;UBERON:0009145!5.98e-11!10;UBERON:0006562!4.83e-10!11;UBERON:0009722!4.83e-10!11;UBERON:0007690!4.83e-10!11;UBERON:0008814!1.31e-07!15 | |ontology_enrichment_uberon=UBERON:0002370!8.66e-26!4;UBERON:0005058!8.66e-26!4;UBERON:0009113!8.66e-26!4;UBERON:0003295!8.66e-26!4;UBERON:0005562!8.66e-26!4;UBERON:0003351!1.44e-17!6;UBERON:0004177!3.29e-15!7;UBERON:0000974!5.98e-11!10;UBERON:0003408!5.98e-11!10;UBERON:0001042!5.98e-11!10;UBERON:0009145!5.98e-11!10;UBERON:0006562!4.83e-10!11;UBERON:0009722!4.83e-10!11;UBERON:0007690!4.83e-10!11;UBERON:0008814!1.31e-07!15 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr4:8204368..8204371,+ | |short_description=p@chr4:8204368..8204371,+ | ||
}} | }} |
Latest revision as of 07:20, 30 July 2015
Short description: | p@chr4:8204368..8204371, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:8204368..8204371, + |
Coexpression cluster: | C419_acute_chronic_thymus_xeroderma_Burkitt_Hodgkin_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.64e-17 | 25 |
pro-T cell | 4.64e-17 | 25 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.07e-13 | 8 |
leukemia | 2.03e-11 | 39 |
hematologic cancer | 4.95e-09 | 51 |
immune system cancer | 4.95e-09 | 51 |