FFCP PHASE1:Hg19::chr3:149192427..149192438,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7104 | |EntrezGene=7104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11856 | |HGNC=11856 | ||
|TSSclassifier=strong | |||
|UniProt=P48230 | |UniProt=P48230 | ||
|association_with_transcript=0bp_to_uc003exd.1_5end | |association_with_transcript=0bp_to_uc003exd.1_5end | ||
|cluster_id=chr3:149192427..149192438,+ | |||
|coexpression_cluster_id=C794 | |coexpression_cluster_id=C794 | ||
|description=CAGE_peak_2_at_TM4SF4_5end | |description=CAGE_peak_2_at_TM4SF4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!1.95e-07!12;CL:0000417!1.95e-07!12;CL:0000668!1.95e-07!12;CL:0000414!1.95e-07!12;CL:0000412!1.95e-07!12;CL:0000182!1.95e-07!12 | |ontology_enrichment_celltype=CL:0000181!1.95e-07!12;CL:0000417!1.95e-07!12;CL:0000668!1.95e-07!12;CL:0000414!1.95e-07!12;CL:0000412!1.95e-07!12;CL:0000182!1.95e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.82e-11;12 | |ontology_enrichment_celltype_v019=CL:0000182;3.82e-11;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.82e-11,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.71e-15;13!UBERON:0004161;4.18e-12;11!UBERON:0006242;1.43e-09;1 | |ontology_enrichment_development_v019=UBERON:0009497;1.71e-15;13!UBERON:0004161;4.18e-12;11!UBERON:0006242;1.43e-09;1 | ||
|ontology_enrichment_disease=DOID:4468!3.29e-11!2;DOID:299!7.58e-07!25 | |ontology_enrichment_disease=DOID:4468!3.29e-11!2;DOID:299!7.58e-07!25 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@TM4SF4 | |short_description=p2@TM4SF4 | ||
}} | }} |
Latest revision as of 21:30, 15 September 2015
Short description: | p2@TM4SF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TM4SF4_5end |
Coexpression cluster: | C794_small_signet_adenocarcinoma_colon_Hepatocyte_gall_liver |
Association with transcript: | 0bp_to_uc003exd.1_5end |
EntrezGene: | TM4SF4 |
HGNC: | 11856 |
UniProt: | P48230 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.82e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 7.19e-25 | 25 |
anatomical boundary | 7.19e-25 | 25 |
hepatobiliary system | 7.19e-25 | 25 |
foregut-midgut junction | 7.19e-25 | 25 |
septum transversum | 7.19e-25 | 25 |
hepatic diverticulum | 1.87e-22 | 22 |
liver primordium | 1.87e-22 | 22 |
digestive tract diverticulum | 1.96e-21 | 23 |
liver | 3.69e-20 | 19 |
digestive gland | 3.69e-20 | 19 |
liver bud | 3.69e-20 | 19 |
epithelial sac | 1.22e-19 | 25 |
sac | 7.63e-19 | 26 |
small intestine | 4.88e-15 | 4 |
gut epithelium | 2.59e-13 | 54 |
exocrine gland | 4.61e-12 | 31 |
exocrine system | 4.61e-12 | 31 |
intestine | 5.34e-11 | 17 |
abdomen element | 9.22e-11 | 54 |
abdominal segment element | 9.22e-11 | 54 |
subdivision of digestive tract | 9.93e-11 | 118 |
endocrine gland | 1.35e-10 | 35 |
endocrine system | 2.00e-10 | 45 |
endo-epithelium | 4.91e-10 | 82 |
digestive system | 1.08e-09 | 145 |
digestive tract | 1.08e-09 | 145 |
primitive gut | 1.08e-09 | 145 |
abdominal segment of trunk | 1.49e-09 | 60 |
abdomen | 1.49e-09 | 60 |
endoderm-derived structure | 1.55e-08 | 160 |
endoderm | 1.55e-08 | 160 |
presumptive endoderm | 1.55e-08 | 160 |
trunk region element | 8.71e-08 | 101 |
gastrointestinal system | 1.47e-07 | 25 |