FFCP PHASE1:Hg19::chr22:20861858..20861914,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51586 | |EntrezGene=51586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14248 | |HGNC=14248 | ||
|TSSclassifier=strong | |||
|UniProt=Q96RN5,G3V1P5,C9J1I1,F5GZU5,C9JLN7,F2Z2B7,B4DM43 | |UniProt=Q96RN5,G3V1P5,C9J1I1,F5GZU5,C9JLN7,F2Z2B7,B4DM43 | ||
|association_with_transcript=0bp_to_ENST00000263205,ENST00000292733,ENST00000406969,ENST00000414658,ENST00000425759,ENST00000432052,ENST00000433831,ENST00000477824,ENST00000486656,ENST00000542773,NM_001003891,NM_015889,uc002zsn.1,uc002zso.2,uc002zsp.2,uc002zsq.2,uc002zsr.2,uc010gso.2_5end | |association_with_transcript=0bp_to_ENST00000263205,ENST00000292733,ENST00000406969,ENST00000414658,ENST00000425759,ENST00000432052,ENST00000433831,ENST00000477824,ENST00000486656,ENST00000542773,NM_001003891,NM_015889,uc002zsn.1,uc002zso.2,uc002zsp.2,uc002zsq.2,uc002zsr.2,uc010gso.2_5end | ||
|cluster_id=chr22:20861858..20861914,+ | |||
|description=CAGE_peak_1_at_MED15_5end | |description=CAGE_peak_1_at_MED15_5end | ||
|id=chr22:20861858..20861914,+ | |id=chr22:20861858..20861914,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.08e-15!42;CL:0000860!6.23e-12!45;CL:0000766!3.24e-11!76;CL:0002371!1.49e-10!591;CL:0000144!1.65e-09!625;CL:0000115!2.25e-09!35;CL:0000557!2.87e-09!71;CL:0002009!3.60e-08!65;CL:0002139!7.37e-08!24;CL:0002194!1.08e-07!63;CL:0000576!1.08e-07!63;CL:0000040!1.08e-07!63;CL:0000559!1.08e-07!63;CL:0002078!1.14e-07!44;CL:0000003!1.82e-07!722;CL:0000839!2.40e-07!70;CL:0000063!4.87e-07!578;CL:0000763!5.34e-07!112;CL:0000049!5.34e-07!112 | |ontology_enrichment_celltype=CL:0002057!8.08e-15!42;CL:0000860!6.23e-12!45;CL:0000766!3.24e-11!76;CL:0002371!1.49e-10!591;CL:0000144!1.65e-09!625;CL:0000115!2.25e-09!35;CL:0000557!2.87e-09!71;CL:0002009!3.60e-08!65;CL:0002139!7.37e-08!24;CL:0002194!1.08e-07!63;CL:0000576!1.08e-07!63;CL:0000040!1.08e-07!63;CL:0000559!1.08e-07!63;CL:0002078!1.14e-07!44;CL:0000003!1.82e-07!722;CL:0000839!2.40e-07!70;CL:0000063!4.87e-07!578;CL:0000763!5.34e-07!112;CL:0000049!5.34e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.38e-15;33!CL:0002057;1.38e-15;33!CL:0000473;3.57e-10;39!CL:0000234;3.57e-10;39!CL:0000576;2.33e-08;48!CL:0000115;7.06e-08;36!CL:0002139;7.61e-08;24!CL:0000766;6.33e-07;69 | |ontology_enrichment_celltype_v019=CL:0000860;1.38e-15;33!CL:0002057;1.38e-15;33!CL:0000473;3.57e-10;39!CL:0000234;3.57e-10;39!CL:0000576;2.33e-08;48!CL:0000115;7.06e-08;36!CL:0002139;7.61e-08;24!CL:0000766;6.33e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.08e-15,42;CL:0002057,8.08e-15,42;CL:0000766,3.17e-13,72;CL:0000473,1.10e-11,48;CL:0000234,1.10e-11,48;CL:0000557,4.14e-11,67;CL:0002009,5.89e-10,61;CL:0002194,1.93e-09,59;CL:0000576,1.93e-09,59;CL:0000040,1.93e-09,59;CL:0000559,1.93e-09,59;CL:0000115,2.15e-09,36;CL:0000839,6.34e-09,66;CL:0000763,3.86e-08,108;CL:0000049,3.86e-08,108;CL:0002139,7.37e-08,24;CL:0002078,1.01e-07,45;CL:0000738,2.94e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;2.84e-11;42 | |ontology_enrichment_development_v019=CL:0002057;2.84e-11;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!8.73e-14!216;UBERON:0002193!7.08e-11!112;UBERON:0002390!4.01e-09!102;UBERON:0003061!4.01e-09!102;UBERON:0002371!2.17e-08!80;UBERON:0002405!6.24e-07!115;UBERON:0001474!8.52e-07!86 | |ontology_enrichment_uberon=UBERON:0003081!8.73e-14!216;UBERON:0002193!7.08e-11!112;UBERON:0002390!4.01e-09!102;UBERON:0003061!4.01e-09!102;UBERON:0002371!2.17e-08!80;UBERON:0002405!6.24e-07!115;UBERON:0001474!8.52e-07!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.90e-14,203;UBERON:0002193,2.06e-12,108;UBERON:0002405,1.18e-11,93;UBERON:0002390,1.44e-10,98;UBERON:0003061,1.44e-10,98;UBERON:0002371,5.59e-10,76;UBERON:0001474,4.17e-08,82;UBERON:0000926,4.77e-07,315;UBERON:0004120,4.77e-07,315;UBERON:0006603,4.77e-07,315 | |||
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|short_description=p1@MED15 | |short_description=p1@MED15 | ||
}} | }} |
Latest revision as of 04:56, 19 September 2015
Short description: | p1@MED15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MED15_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000263205, ENST00000292733, ENST00000406969, ENST00000414658, ENST00000425759, ENST00000432052, ENST00000433831, ENST00000477824, ENST00000486656, ENST00000542773, NM_001003891, NM_015889, uc002zsn.1, uc002zso.2, uc002zsp.2, uc002zsq.2, uc002zsr.2, uc010gso.2_5end |
EntrezGene: | MED15 |
HGNC: | 14248 |
UniProt: | Q96RN5G3V1P5C9J1I1F5GZU5C9JLN7F2Z2B7B4DM43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.08e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.08e-15 | 42 |
myeloid leukocyte | 3.17e-13 | 72 |
defensive cell | 1.10e-11 | 48 |
phagocyte | 1.10e-11 | 48 |
granulocyte monocyte progenitor cell | 4.14e-11 | 67 |
macrophage dendritic cell progenitor | 5.89e-10 | 61 |
monopoietic cell | 1.93e-09 | 59 |
monocyte | 1.93e-09 | 59 |
monoblast | 1.93e-09 | 59 |
promonocyte | 1.93e-09 | 59 |
endothelial cell | 2.15e-09 | 36 |
myeloid lineage restricted progenitor cell | 6.34e-09 | 66 |
myeloid cell | 3.86e-08 | 108 |
common myeloid progenitor | 3.86e-08 | 108 |
endothelial cell of vascular tree | 7.37e-08 | 24 |
meso-epithelial cell | 1.01e-07 | 45 |
leukocyte | 2.94e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 5.90e-14 | 203 |
hemolymphoid system | 2.06e-12 | 108 |
immune system | 1.18e-11 | 93 |
hematopoietic system | 1.44e-10 | 98 |
blood island | 1.44e-10 | 98 |
bone marrow | 5.59e-10 | 76 |
bone element | 4.17e-08 | 82 |
mesoderm | 4.77e-07 | 315 |
mesoderm-derived structure | 4.77e-07 | 315 |
presumptive mesoderm | 4.77e-07 | 315 |