FFCP PHASE1:Hg19::chr19:39898760..39898777,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:39898760..39898777,+ | |||
|coexpression_cluster_id=C250 | |coexpression_cluster_id=C250 | ||
|description=CAGE_peak_at_chr19:39898760..39898777,+ | |description=CAGE_peak_at_chr19:39898760..39898777,+ | ||
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|ontology_enrichment_celltype=CL:0002057!1.28e-25!42;CL:0000860!8.72e-23!45;CL:0000766!2.11e-22!76;CL:0000738!2.22e-22!140;CL:0002009!4.91e-18!65;CL:0000557!5.72e-18!71;CL:0002194!7.08e-17!63;CL:0000576!7.08e-17!63;CL:0000040!7.08e-17!63;CL:0000559!7.08e-17!63;CL:0000839!3.26e-16!70;CL:0002087!1.24e-15!119;CL:0002031!1.51e-15!124;CL:0000037!1.25e-13!172;CL:0000566!1.25e-13!172;CL:0002032!1.13e-12!165;CL:0000837!1.13e-12!165;CL:0000763!1.42e-12!112;CL:0000049!1.42e-12!112;CL:0000988!6.66e-12!182;CL:0000094!4.54e-07!8 | |ontology_enrichment_celltype=CL:0002057!1.28e-25!42;CL:0000860!8.72e-23!45;CL:0000766!2.11e-22!76;CL:0000738!2.22e-22!140;CL:0002009!4.91e-18!65;CL:0000557!5.72e-18!71;CL:0002194!7.08e-17!63;CL:0000576!7.08e-17!63;CL:0000040!7.08e-17!63;CL:0000559!7.08e-17!63;CL:0000839!3.26e-16!70;CL:0002087!1.24e-15!119;CL:0002031!1.51e-15!124;CL:0000037!1.25e-13!172;CL:0000566!1.25e-13!172;CL:0002032!1.13e-12!165;CL:0000837!1.13e-12!165;CL:0000763!1.42e-12!112;CL:0000049!1.42e-12!112;CL:0000988!6.66e-12!182;CL:0000094!4.54e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.07e-31;33!CL:0002057;2.07e-31;33!CL:0000473;1.22e-23;39!CL:0000234;1.22e-23;39!CL:0000576;4.63e-22;48!CL:0000766;4.01e-19;69!CL:0000094;5.84e-11;8!CL:0002087;6.59e-09;104!CL:0000738;6.31e-08;136!CL:0000763;7.95e-08;100!CL:0000081;2.44e-07;11!CL:0002393;2.62e-07;6!CL:0002397;2.62e-07;6 | |ontology_enrichment_celltype_v019=CL:0000860;2.07e-31;33!CL:0002057;2.07e-31;33!CL:0000473;1.22e-23;39!CL:0000234;1.22e-23;39!CL:0000576;4.63e-22;48!CL:0000766;4.01e-19;69!CL:0000094;5.84e-11;8!CL:0002087;6.59e-09;104!CL:0000738;6.31e-08;136!CL:0000763;7.95e-08;100!CL:0000081;2.44e-07;11!CL:0002393;2.62e-07;6!CL:0002397;2.62e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.19e-43,42;CL:0002057,9.19e-43,42;CL:0000766,2.71e-40,72;CL:0000473,3.89e-39,48;CL:0000234,3.89e-39,48;CL:0000738,2.90e-34,136;CL:0000557,8.43e-33,67;CL:0002009,1.22e-31,61;CL:0000839,4.89e-30,66;CL:0002194,1.39e-29,59;CL:0000576,1.39e-29,59;CL:0000040,1.39e-29,59;CL:0000559,1.39e-29,59;CL:0002031,5.36e-25,120;CL:0002087,3.69e-24,115;CL:0000763,1.64e-23,108;CL:0000049,1.64e-23,108;CL:0000037,8.51e-23,168;CL:0002032,3.54e-21,161;CL:0000837,3.54e-21,161;CL:0000988,2.23e-20,177;CL:0000094,5.59e-11,8;CL:0002393,2.27e-09,9;CL:0002397,2.27e-09,9;CL:0000081,2.36e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.94e-30;42!CL:0000049;3.02e-07;108 | |ontology_enrichment_development_v019=CL:0002057;1.94e-30;42!CL:0000049;3.02e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.91e-17!102;UBERON:0003061!2.91e-17!102;UBERON:0007023!7.23e-16!115;UBERON:0002371!3.22e-15!80;UBERON:0002193!5.38e-15!112;UBERON:0001474!3.90e-13!86;UBERON:0004765!2.38e-12!101;UBERON:0001434!2.38e-12!101;UBERON:0002405!1.09e-10!115 | |ontology_enrichment_uberon=UBERON:0002390!2.91e-17!102;UBERON:0003061!2.91e-17!102;UBERON:0007023!7.23e-16!115;UBERON:0002371!3.22e-15!80;UBERON:0002193!5.38e-15!112;UBERON:0001474!3.90e-13!86;UBERON:0004765!2.38e-12!101;UBERON:0001434!2.38e-12!101;UBERON:0002405!1.09e-10!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.78e-29,76;UBERON:0001474,5.75e-27,82;UBERON:0004765,6.34e-26,90;UBERON:0002390,2.67e-25,98;UBERON:0003061,2.67e-25,98;UBERON:0002405,1.62e-24,93;UBERON:0002193,6.01e-24,108;UBERON:0001434,1.75e-23,100;UBERON:0007023,1.33e-13,114;UBERON:0002204,2.82e-11,167;UBERON:0003081,2.05e-09,203 | |||
|phase1_expression=1.81678379270557,0.428201047781966,1.26858963686374,0,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0,0,1.36142988256051,1.32558950291166,0,0,0,0,0,0,0,0,0,0.125542639594803,0.458480434487708,0.246301768349837,0.314843125254717,11.8009283054671,3.45446458287491,7.7408061658038,0,0,0.369754010166788,0,0,0,2.76997704265939,13.2359335330294,11.5015761479401,0,0.32389366601898,0.515151135268373,4.07115068582781,1.88937971844405,3.39617685662943,7.20530014407622,3.70051099219643,3.40677007984614,12.3707728698525,6.66017836975662,8.0403958162119,12.0660988257816,6.45484683583826,12.1883837934908,6.21199720490596,5.73102915121476,4.94391665779186,11.3251040177234,9.62787081228281,10.8687311385837,7.58657990429447,7.18069167437875,7.2458207590558,5.5139755339431,6.80862269629368,3.11411124497787,8.29120595347253,7.30076085788282,9.77349801173025,6.65939452896706,5.89244217580104,5.06339819905415,5.0701268714866,5.95292039902122,2.30624510059213,3.70684482783434,3.60424542819615,2.73233497385036,1.99508920618874,4.37616689837998,1.64397738388171,0,0,0,1.28019066769952,1.60158394814405,0,0,0,5.12291672198504,5.28513470433845,12.2327433000073,3.96513985737078,1.68152568894461,0.263384084775077,1.96709770113833,10.2182798314783,14.8033079279647,0.167186495390678,3.58514493296949,0.946895611469467,1.94826728407911,0.779873198196215,0.883817722424512,0.886135578334485,1.62482318259009,1.0247305578054,1.30059347559878,0.328875809207352,0.552700035571697,0,0.444859689486181,0.802622484269139,0,0.566546713487831,0,0.34362744548263,2.78321661221453,0.318565414324097,0.651083453856419,0,0.602300476311091,0.511946444617674,0,0.710331756132051,0,5.04016858061831,9.89528724398977,5.35850294366356,0,0.670700859703636,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0.523916301990851,0,0,0,0,0.132957960518865,3.57735936458013,0.571994910780128,1.48583000531826,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,17.1314542666882,15.511210565933,0.436094052142534,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.936480230490962,0,0.298897361103602,0,0.161872944368132,0,0,0.122834317311768,0.309977343527296,1.18800285728205,0.989067717114227,0,0,0,0,0.277064115484183,0,0.612975591598039,0.751190294532984,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0.504867548488229,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,3.25057549622385,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0,0.245976877086227,0.343135620597051,0.329250856225877,0,0,0.0925884451585296,0,0,0,0,0,0,1.85194205030644,0,0,0,0.246217006087397,0,0.297262324577456,0,0.16798212819886,0,0,0.290633938513962,0,0,0,74.2234653635964,64.9980989910496,53.0218220390796,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.714889968290738,0,0,0,0.355391948742546,0.791951872933429,0,0,0.099972991182057,2.43247561282381,2.51128545716063,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0,0,0.112085143993527,6.30498432646167,9.70324086867828,7.9572682493444,0,0,0,0,0.637938751653163,15.7291475028908,11.966458368161,14.0901274568252,1.10422342547226,0,0,0.415941723061614,1.42743191037729,0.315404830067869,0.468565659970853,0,4.5481500811197,1.03473071292505,0,0.184369168541703,0.781952530212746,0,0,2.48121631347465,8.41285383192606,11.9534864739858,0.606255142892519,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0.328508624055237,0,0,0.241718899183244,0.40101294060657,1.28913384510255,0.114814448164607,0,0.655622074797121,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,3.91555844261345,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0.170453254832202,0.0890320356467374,0.165284915360978,0.192190067365106,0,0.6069466851333,0,0.62962469366128,0,0,0,0,0.55597265731176,0,0,0,0,0,0,0.318203247925937,0,0.539617372749944,0,0,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0.578775534266688,3.27947376023316,0,1.239293992399,0,0,0.0982490410131212,0,0,2.32218398827431,2.30506425071931,0.379473173765715,0,0.0962221127255121,0.670302275535787,0,4.0481834334015,0.43050537267123,0,0.443430153536676,0,0.507447609232169,0,2.27858874869665,0,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0.635020748171649,0,0,0.228234679033192,0,0,0,0.321176150207399,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,6.73937624650712,0,0.222886768554957,0.568272293612826,0.95497793895076,0.296964680832639,0.921482106297696,1.9882952955326,0.140669416410513,0.222617410045812,0.329607748453519,0,4.38345574152353,3.31540698637377,0,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,0,5.81996093257908,7.18449277040819,0,0,0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|phase1_expression=1.81678379270557,0.428201047781966,1.26858963686374,0,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0,0,1.36142988256051,1.32558950291166,0,0,0,0,0,0,0,0,0,0.125542639594803,0.458480434487708,0.246301768349837,0.314843125254717,11.8009283054671,3.45446458287491,7.7408061658038,0,0,0.369754010166788,0,0,0,2.76997704265939,13.2359335330294,11.5015761479401,0,0.32389366601898,0.515151135268373,4.07115068582781,1.88937971844405,3.39617685662943,7.20530014407622,3.70051099219643,3.40677007984614,12.3707728698525,6.66017836975662,8.0403958162119,12.0660988257816,6.45484683583826,12.1883837934908,6.21199720490596,5.73102915121476,4.94391665779186,11.3251040177234,9.62787081228281,10.8687311385837,7.58657990429447,7.18069167437875,7.2458207590558,5.5139755339431,6.80862269629368,3.11411124497787,8.29120595347253,7.30076085788282,9.77349801173025,6.65939452896706,5.89244217580104,5.06339819905415,5.0701268714866,5.95292039902122,2.30624510059213,3.70684482783434,3.60424542819615,2.73233497385036,1.99508920618874,4.37616689837998,1.64397738388171,0,0,0,1.28019066769952,1.60158394814405,0,0,0,5.12291672198504,5.28513470433845,12.2327433000073,3.96513985737078,1.68152568894461,0.263384084775077,1.96709770113833,10.2182798314783,14.8033079279647,0.167186495390678,3.58514493296949,0.946895611469467,1.94826728407911,0.779873198196215,0.883817722424512,0.886135578334485,1.62482318259009,1.0247305578054,1.30059347559878,0.328875809207352,0.552700035571697,0,0.444859689486181,0.802622484269139,0,0.566546713487831,0,0.34362744548263,2.78321661221453,0.318565414324097,0.651083453856419,0,0.602300476311091,0.511946444617674,0,0.710331756132051,0,5.04016858061831,9.89528724398977,5.35850294366356,0,0.670700859703636,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0.523916301990851,0,0,0,0,0.132957960518865,3.57735936458013,0.571994910780128,1.48583000531826,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,17.1314542666882,15.511210565933,0.436094052142534,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.936480230490962,0,0.298897361103602,0,0.161872944368132,0,0,0.122834317311768,0.309977343527296,1.18800285728205,0.989067717114227,0,0,0,0,0.277064115484183,0,0.612975591598039,0.751190294532984,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0.504867548488229,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,3.25057549622385,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0,0.245976877086227,0.343135620597051,0.329250856225877,0,0,0.0925884451585296,0,0,0,0,0,0,1.85194205030644,0,0,0,0.246217006087397,0,0.297262324577456,0,0.16798212819886,0,0,0.290633938513962,0,0,0,74.2234653635964,64.9980989910496,53.0218220390796,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.714889968290738,0,0,0,0.355391948742546,0.791951872933429,0,0,0.099972991182057,2.43247561282381,2.51128545716063,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0,0,0.112085143993527,6.30498432646167,9.70324086867828,7.9572682493444,0,0,0,0,0.637938751653163,15.7291475028908,11.966458368161,14.0901274568252,1.10422342547226,0,0,0.415941723061614,1.42743191037729,0.315404830067869,0.468565659970853,0,4.5481500811197,1.03473071292505,0,0.184369168541703,0.781952530212746,0,0,2.48121631347465,8.41285383192606,11.9534864739858,0.606255142892519,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0.328508624055237,0,0,0.241718899183244,0.40101294060657,1.28913384510255,0.114814448164607,0,0.655622074797121,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,3.91555844261345,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0.170453254832202,0.0890320356467374,0.165284915360978,0.192190067365106,0,0.6069466851333,0,0.62962469366128,0,0,0,0,0.55597265731176,0,0,0,0,0,0,0.318203247925937,0,0.539617372749944,0,0,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0.578775534266688,3.27947376023316,0,1.239293992399,0,0,0.0982490410131212,0,0,2.32218398827431,2.30506425071931,0.379473173765715,0,0.0962221127255121,0.670302275535787,0,4.0481834334015,0.43050537267123,0,0.443430153536676,0,0.507447609232169,0,2.27858874869665,0,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0.635020748171649,0,0,0.228234679033192,0,0,0,0.321176150207399,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,6.73937624650712,0,0.222886768554957,0.568272293612826,0.95497793895076,0.296964680832639,0.921482106297696,1.9882952955326,0.140669416410513,0.222617410045812,0.329607748453519,0,4.38345574152353,3.31540698637377,0,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,0,5.81996093257908,7.18449277040819,0,0,0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| ||
|short_description=p@chr19:39898760..39898777,+ | |short_description=p@chr19:39898760..39898777,+ | ||
}} | }} |
Latest revision as of 07:37, 26 July 2015
Short description: | p@chr19:39898760..39898777, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39898760..39898777, + |
Coexpression cluster: | C250_Mast_Neutrophils_CD14_Eosinophils_CD8_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.19e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.19e-43 | 42 |
myeloid leukocyte | 2.71e-40 | 72 |
defensive cell | 3.89e-39 | 48 |
phagocyte | 3.89e-39 | 48 |
leukocyte | 2.90e-34 | 136 |
granulocyte monocyte progenitor cell | 8.43e-33 | 67 |
macrophage dendritic cell progenitor | 1.22e-31 | 61 |
myeloid lineage restricted progenitor cell | 4.89e-30 | 66 |
monopoietic cell | 1.39e-29 | 59 |
monocyte | 1.39e-29 | 59 |
monoblast | 1.39e-29 | 59 |
promonocyte | 1.39e-29 | 59 |
hematopoietic lineage restricted progenitor cell | 5.36e-25 | 120 |
nongranular leukocyte | 3.69e-24 | 115 |
myeloid cell | 1.64e-23 | 108 |
common myeloid progenitor | 1.64e-23 | 108 |
hematopoietic stem cell | 8.51e-23 | 168 |
hematopoietic oligopotent progenitor cell | 3.54e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.54e-21 | 161 |
hematopoietic cell | 2.23e-20 | 177 |
granulocyte | 5.59e-11 | 8 |
intermediate monocyte | 2.27e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.27e-09 | 9 |
blood cell | 2.36e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.78e-29 | 76 |
bone element | 5.75e-27 | 82 |
skeletal element | 6.34e-26 | 90 |
hematopoietic system | 2.67e-25 | 98 |
blood island | 2.67e-25 | 98 |
immune system | 1.62e-24 | 93 |
hemolymphoid system | 6.01e-24 | 108 |
skeletal system | 1.75e-23 | 100 |
adult organism | 1.33e-13 | 114 |
musculoskeletal system | 2.82e-11 | 167 |
lateral plate mesoderm | 2.05e-09 | 203 |