FFCP PHASE1:Hg19::chr1:28212537..28212556,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:28212537..28212556,+
|short_description=p9@C1orf38
|description=CAGE_peak_9_at_C1orf38_5end
|association_with_transcript=100bp_to_AF323721_5end
|EntrezGen...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9473 | |EntrezGene=9473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=16839 | |HGNC=16839 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=100bp_to_AF323721_5end | |||
|cluster_id=chr1:28212537..28212556,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_9_at_C1orf38_5end | |||
|id=chr1:28212537..28212556,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.69e-48!76;CL:0002057!1.22e-44!42;CL:0000860!4.09e-41!45;CL:0002194!3.57e-38!63;CL:0000576!3.57e-38!63;CL:0000040!3.57e-38!63;CL:0000559!3.57e-38!63;CL:0002009!9.94e-37!65;CL:0000738!1.09e-34!140;CL:0000763!2.60e-34!112;CL:0000049!2.60e-34!112;CL:0000839!1.78e-33!70;CL:0000557!7.03e-33!71;CL:0000037!1.45e-28!172;CL:0000566!1.45e-28!172;CL:0002087!2.31e-27!119;CL:0000988!2.83e-26!182;CL:0002032!8.79e-26!165;CL:0000837!8.79e-26!165;CL:0002393!5.88e-24!9;CL:0002397!5.88e-24!9;CL:0002031!3.50e-21!124;CL:0000094!7.07e-18!8;CL:0000081!1.19e-12!11;CL:0000775!4.83e-10!3;CL:0000842!2.24e-09!3;CL:0000134!5.21e-09!358;CL:0000875!1.21e-08!3;CL:0002396!1.21e-08!3;CL:0002320!1.35e-08!365;CL:0000771!2.89e-07!2;CL:0000219!3.73e-07!390;CL:0000224!4.14e-07!4;CL:0000048!7.17e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.28e-56;8!CL:0000081;5.65e-41;11!CL:0000775;1.11e-38;3!CL:0002393;4.51e-33;6!CL:0002397;4.51e-33;6!CL:0000771;1.67e-26;2!CL:0000766;5.06e-16;69!CL:0000763;1.52e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.04e-56,8;CL:0000081,6.95e-41,11;CL:0000775,1.11e-38,3;CL:0000766,3.15e-27,72;CL:0000771,1.67e-26,2;CL:0002393,2.84e-22,9;CL:0002397,2.84e-22,9;CL:0000763,9.86e-18,108;CL:0000049,9.86e-18,108;CL:0000738,3.72e-16,136;CL:0000037,8.99e-13,168;CL:0000988,4.88e-12,177;CL:0000473,4.96e-12,48;CL:0000234,4.96e-12,48;CL:0002032,2.12e-11,161;CL:0000837,2.12e-11,161;CL:0000860,3.05e-10,42;CL:0002057,3.05e-10,42;CL:0002194,1.65e-09,59;CL:0000576,1.65e-09,59;CL:0000040,1.65e-09,59;CL:0000559,1.65e-09,59;CL:0002009,3.50e-09,61;CL:0000839,1.88e-08,66;CL:0000557,2.56e-08,67 | |||
|ontology_enrichment_development_v019=CL:0002057;2.01e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.92e-38!102;UBERON:0003061!2.92e-38!102;UBERON:0002193!1.19e-35!112;UBERON:0002371!3.48e-28!80;UBERON:0001474!1.34e-25!86;UBERON:0002405!1.08e-23!115;UBERON:0004765!1.72e-20!101;UBERON:0001434!1.72e-20!101;UBERON:0003081!5.30e-13!216;UBERON:0002204!1.15e-10!167;UBERON:0000178!1.40e-08!15;UBERON:0000179!1.40e-08!15;UBERON:0000463!1.40e-08!15;UBERON:0002384!4.91e-08!375;UBERON:0002106!1.37e-07!3;UBERON:0004854!1.37e-07!3;UBERON:0009034!1.37e-07!3;UBERON:0002095!1.37e-07!3;UBERON:0004782!1.37e-07!3;UBERON:0003281!1.37e-07!3;UBERON:0009664!1.37e-07!3;UBERON:0002296!1.37e-07!3;UBERON:0005602!1.37e-07!3;UBERON:0001179!1.37e-07!3;UBERON:0006293!1.37e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.92e-08;15!UBERON:0000179;5.92e-08;15!UBERON:0000463;5.92e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.92e-11,98;UBERON:0003061,2.92e-11,98;UBERON:0002193,4.08e-10,108;UBERON:0000178,5.38e-08,15;UBERON:0000179,5.38e-08,15;UBERON:0000463,5.38e-08,15;UBERON:0002371,2.83e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,1.18009283054671,0,0.464448369948228,0,0,0,0,0.142169232487422,0,1.66198622559563,2.60707781711184,1.73608696572681,0,0,0,0.581592955118259,0.377875943688809,0,0.929716147622738,0,0,0.28769239232215,0,0.236482229888585,1.03423704220986,0.645484683583826,0,0.564727018627814,0,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.598390972864896,0,1.45104619314292,0,0,0.75374599577023,0.521482918420201,0.65156653411535,0,0,0,1.26753171787165,0.425208599930087,0.209658645508376,0.336985893439485,0.450530678524519,0.48217676009124,0.285012743741249,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4026709641308,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,6.74106321552464,8.97484377612075,14.0901274568252,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0.620304078368662,1.72571360654893,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70894156152249,0,0,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,1.18009283054671,0,0.464448369948228,0,0,0,0,0.142169232487422,0,1.66198622559563,2.60707781711184,1.73608696572681,0,0,0,0.581592955118259,0.377875943688809,0,0.929716147622738,0,0,0.28769239232215,0,0.236482229888585,1.03423704220986,0.645484683583826,0,0.564727018627814,0,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.598390972864896,0,1.45104619314292,0,0,0.75374599577023,0.521482918420201,0.65156653411535,0,0,0,1.26753171787165,0.425208599930087,0.209658645508376,0.336985893439485,0.450530678524519,0.48217676009124,0.285012743741249,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4026709641308,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,6.74106321552464,8.97484377612075,14.0901274568252,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0.620304078368662,1.72571360654893,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70894156152249,0,0,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p9@C1orf38 | |||
}} | }} |
Latest revision as of 09:15, 17 September 2015
Short description: | p9@C1orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_C1orf38_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 100bp_to_AF323721_5end |
EntrezGene: | C1orf38 |
HGNC: | 16839 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.04e-56 | 8 |
blood cell | 6.95e-41 | 11 |
neutrophil | 1.11e-38 | 3 |
myeloid leukocyte | 3.15e-27 | 72 |
eosinophil | 1.67e-26 | 2 |
intermediate monocyte | 2.84e-22 | 9 |
CD14-positive, CD16-positive monocyte | 2.84e-22 | 9 |
myeloid cell | 9.86e-18 | 108 |
common myeloid progenitor | 9.86e-18 | 108 |
leukocyte | 3.72e-16 | 136 |
hematopoietic stem cell | 8.99e-13 | 168 |
hematopoietic cell | 4.88e-12 | 177 |
defensive cell | 4.96e-12 | 48 |
phagocyte | 4.96e-12 | 48 |
hematopoietic oligopotent progenitor cell | 2.12e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.12e-11 | 161 |
classical monocyte | 3.05e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.05e-10 | 42 |
monopoietic cell | 1.65e-09 | 59 |
monocyte | 1.65e-09 | 59 |
monoblast | 1.65e-09 | 59 |
promonocyte | 1.65e-09 | 59 |
macrophage dendritic cell progenitor | 3.50e-09 | 61 |
myeloid lineage restricted progenitor cell | 1.88e-08 | 66 |
granulocyte monocyte progenitor cell | 2.56e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.92e-11 | 98 |
blood island | 2.92e-11 | 98 |
hemolymphoid system | 4.08e-10 | 108 |
blood | 5.38e-08 | 15 |
haemolymphatic fluid | 5.38e-08 | 15 |
organism substance | 5.38e-08 | 15 |
bone marrow | 2.83e-07 | 76 |