FFCP PHASE1:Hg19::chr14:90420862..90420885,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90141 | |EntrezGene=90141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20357 | |HGNC=20357 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BUY7 | |UniProt=Q9BUY7 | ||
|association_with_transcript=0bp_to_ENST00000556005,uc001xxs.2,uc001xxw.1_5end | |association_with_transcript=0bp_to_ENST00000556005,uc001xxs.2,uc001xxw.1_5end | ||
|cluster_id=chr14:90420862..90420885,- | |||
|description=CAGE_peak_2_at_EFCAB11_5end | |description=CAGE_peak_2_at_EFCAB11_5end | ||
|id=chr14:90420862..90420885,- | |id=chr14:90420862..90420885,- | ||
|ontology_enrichment_celltype=CL:0000066!7.28e-17!254;CL:0000548!1.06e-16!679;CL:0000004!1.06e-16!679;CL:0000255!1.06e-16!679;CL:0000012!2.40e-16!682;CL:0002321!2.29e-10!248;CL:0000220!2.83e-10!246;CL:0000003!9.62e-10!722;CL:0002139!1.04e-09!24;CL:0000063!5.02e-09!578;CL:0000213!6.30e-09!57;CL:0000215!6.30e-09!57;CL:0000144!6.59e-09!625;CL:0000071!2.07e-08!18;CL:0002546!2.07e-08!18;CL:0000076!3.87e-08!62;CL:0000115!4.75e-08!35;CL:0000222!2.43e-07!119 | |ontology_enrichment_celltype=CL:0000066!7.28e-17!254;CL:0000548!1.06e-16!679;CL:0000004!1.06e-16!679;CL:0000255!1.06e-16!679;CL:0000012!2.40e-16!682;CL:0002321!2.29e-10!248;CL:0000220!2.83e-10!246;CL:0000003!9.62e-10!722;CL:0002139!1.04e-09!24;CL:0000063!5.02e-09!578;CL:0000213!6.30e-09!57;CL:0000215!6.30e-09!57;CL:0000144!6.59e-09!625;CL:0000071!2.07e-08!18;CL:0002546!2.07e-08!18;CL:0000076!3.87e-08!62;CL:0000115!4.75e-08!35;CL:0000222!2.43e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002139;8.30e-12;24!CL:0000071;4.79e-11;18!CL:0000115;9.26e-10;36!CL:0002543;6.84e-07;6 | |ontology_enrichment_celltype_v019=CL:0002139;8.30e-12;24!CL:0000071;4.79e-11;18!CL:0000115;9.26e-10;36!CL:0002543;6.84e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.58e-13,58;CL:0000215,2.58e-13,58;CL:0002139,3.29e-12,24;CL:0000115,5.43e-12,36;CL:0000071,4.00e-11,18;CL:0002546,4.00e-11,18;CL:0000066,1.45e-10,253;CL:0002078,1.94e-09,45;CL:0000076,1.18e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;4.79e-11;18 | |ontology_enrichment_development_v019=CL:0002546;4.79e-11;18 | ||
|ontology_enrichment_disease=DOID:14566!1.08e-11!239;DOID:162!1.70e-11!235;DOID:0050687!3.04e-09!143;DOID:305!8.53e-08!106 | |ontology_enrichment_disease=DOID:14566!1.08e-11!239;DOID:162!1.70e-11!235;DOID:0050687!3.04e-09!143;DOID:305!8.53e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.07e-08!18;UBERON:0004638!2.07e-08!18;UBERON:0004852!2.07e-08!18;UBERON:0000487!1.60e-07!22 | |ontology_enrichment_uberon=UBERON:0001986!2.07e-08!18;UBERON:0004638!2.07e-08!18;UBERON:0004852!2.07e-08!18;UBERON:0000487!1.60e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.79e-11;18!UBERON:0001986;4.79e-11;18!UBERON:0004852;4.79e-11;18!UBERON:0000487;1.86e-08;22!UBERON:0002331;3.41e-07;10!UBERON:0006914;4.46e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0004638;4.79e-11;18!UBERON:0001986;4.79e-11;18!UBERON:0004852;4.79e-11;18!UBERON:0000487;1.86e-08;22!UBERON:0002331;3.41e-07;10!UBERON:0006914;4.46e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.00e-11,18;UBERON:0001986,4.00e-11,18;UBERON:0004852,4.00e-11,18;UBERON:0000487,1.62e-08,22;UBERON:0002331,2.73e-07,10;UBERON:0000358,2.73e-07,10;UBERON:0000307,2.73e-07,10;UBERON:0000091,2.73e-07,10;UBERON:0000087,2.73e-07,10;UBERON:0007010,2.73e-07,10;UBERON:0007806,2.73e-07,10;UBERON:0008780,2.73e-07,10;UBERON:0005728,2.73e-07,10;UBERON:0006914,3.95e-07,25 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.140954404095971,1.0007329835313,0.893922188854576,0.872338524100369,2.53299878168311,0,0.522371256399677,0.737201809504527,0,1.74753097704138,1.31883489114227,0.74259811776028,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.410623275218653,0,1.37544130346312,1.06730766284929,0.865818594450472,0,0,0,0.919421224478927,0.90361775633475,1.10926203050036,0.387336002901508,0.142169232487422,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,2.68511379871414,0,0,0.289693037921647,0.795285947051099,0.973269740605272,0.756278537312543,1.10864698731282,0.702678285545008,0.130979075497713,0,0.370784442784429,0.649094787309367,1.39303789839414,1.46253756570752,0,0,0,0.993812036833525,0.860234595106124,2.42998351125316,2.82653970962005,1.67799774483962,2.20094433552054,0.835979866147242,1.8089173141853,1.42306505074684,0.33472061276467,0.805658634218294,3.04108842287405,0.732186172644509,4.04429388380456,1.62028389576352,2.05389375053383,1.12264686313085,1.35133776579987,3.06633274931766,0,2.5648244150257,0,0,0,0.496971951695318,1.01304409331664,0,0.286836620748814,0,0.560677600142307,0,0.74000264525148,0.933633106199299,1.34710672069688,2.28846664358842,0.454072282934794,0.576175924479999,0.937285727335186,0.624320153660641,0.570471821544449,0,0.587172493218824,0.323745888736263,0.561803226808994,0.408308342509787,0.491337269247072,0.413303124703062,0,0.494533858557114,1.82032272387605,0.718618141816238,0.336672227908132,0.500474079487857,1.6623846929051,0,0.612975591598039,0.300476117813194,1.58805056424029,1.07633781413317,0.427114777637135,0.211931901159562,0.900273288253207,1.03052529238439,0,0.37223371266318,0.506328996723799,0.876933046450788,0.757301322732344,0.276149695926898,0.80823028409406,0.355009592516614,0.503760491138201,0.339121184620975,0.193260853163297,0,0,0.487894824518382,0.397589304964456,0.580969714347592,1.14027160516907,0.756962552626885,1.09493207722749,0,0,0,0.928735856063958,0,1.41968160047813,0.337169380156203,0.964044119533928,0.882351781859152,0,1.18635309555548,1.07865046528132,0.588664395376038,0.769494313892781,1.4763109092493,0,0.4115740113314,0,1.26755034821831,0,0,0,0.245976877086227,0.857839051492628,0.219500570817251,0,0.201057944823262,1.11106134190236,1.3032332212413,0,0,0.927443239800615,0.469634776943287,0.433099343283221,1.85194205030644,0.761016608938393,0,0,0.246217006087397,0.702012795417713,0.148631162288728,0.93733833986777,0.16798212819886,0.141775097242386,2.23896306757121,3.19697332365358,0.383382679165211,0.492663237895943,0.264145302039678,0,0.720599767084807,0.12624243342638,0.888970520090367,0,1.17217447210047,0,0.719792448923265,1.20137223137567,0.285826432630578,0.897048674762886,3.05172048183296,1.9067954313447,1.29271715757778,3.57656445851882,0,1.59562869950922,1.04007436911366,1.28603687131071,0,0.799266537048298,0.714889968290738,1.08524321078289,1.64648067356154,0.65147236858747,0.710783897485092,1.58390374586686,0.602878754119172,0,0.199945982364114,0,0,0,0.718874566474748,0,0,0.289562613335158,0.205476322550383,0,0.560425719967636,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0.613457458595699,0.500170521059677,0.271265023699736,0.623912584592421,0.713715955188647,0.788512075169673,0.468565659970853,0.300946099727719,0,1.03473071292505,0.664225598535437,0.553107505625109,0.955719759148911,0.195801157462741,0.343143423810856,0,0.215714200818617,0,0,0,0.30239029332968,0.248107807818777,0.460385919864187,0.561320188866147,0,0.511707249066704,0.482561763430822,1.48418066444991,0.308419387605311,0.887808626565635,0.9033987161519,0.519254429183621,0.348631135379878,0.120859449591622,0,0.0920809889358963,0.34444334449382,0.910455840033585,0.786746489756545,0.451199612907412,0.770153371044148,1.56869953835371,0,0.316654886678627,2.27466768141793,4.76262374774244,0.647747748306418,0,0.270946437543853,0,1.01950509218015,0,0.447749509444357,0,0,0.769350375349168,0.656029291399411,1.30151357865721,0.103041011647722,0.457847324091717,0.41254749960294,0.574265537996172,0,0,0.870036464629098,0.924291702687866,0.921022048356777,0.551346289938122,0.859361958946189,0.580066775656914,0.340906509664404,0.534192213880424,0,0.960950336825531,0.510450849978337,0.2023155617111,0.929691098594572,0.31481234683064,0,0.616067160352178,0,0,0.74129687641568,0.572499546967965,1.116475108079,0.632758849437452,0.38126038784765,0,0,0.636406495851874,0,0.539617372749944,0.823611089208164,0.589062011728432,0.404364963146632,0,0.842516912477962,0.48763373908959,0,0,0.9554993798559,0.565621727814851,1.13008116620243,0,0.66343897524122,0,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| ||
|short_description=p2@EFCAB11 | |short_description=p2@EFCAB11 | ||
}} | }} |
Latest revision as of 11:46, 16 September 2015
Short description: | p2@EFCAB11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EFCAB11_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000556005, uc001xxs.2, uc001xxw.1_5end |
EntrezGene: | EFCAB11 |
HGNC: | 20357 |
UniProt: | Q9BUY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.58e-13 | 58 |
barrier cell | 2.58e-13 | 58 |
endothelial cell of vascular tree | 3.29e-12 | 24 |
endothelial cell | 5.43e-12 | 36 |
blood vessel endothelial cell | 4.00e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.00e-11 | 18 |
epithelial cell | 1.45e-10 | 253 |
meso-epithelial cell | 1.94e-09 | 45 |
squamous epithelial cell | 1.18e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.00e-11 | 18 |
endothelium | 4.00e-11 | 18 |
cardiovascular system endothelium | 4.00e-11 | 18 |
simple squamous epithelium | 1.62e-08 | 22 |
umbilical cord | 2.73e-07 | 10 |
blastocyst | 2.73e-07 | 10 |
blastula | 2.73e-07 | 10 |
bilaminar disc | 2.73e-07 | 10 |
inner cell mass | 2.73e-07 | 10 |
cleaving embryo | 2.73e-07 | 10 |
connecting stalk | 2.73e-07 | 10 |
inner cell mass derived epiblast | 2.73e-07 | 10 |
extraembryonic mesoderm | 2.73e-07 | 10 |
squamous epithelium | 3.95e-07 | 25 |