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Coexpression cluster:C44: Difference between revisions

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{{Coexpression_clusters
{
|full_id=C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature
 

Latest revision as of 10:16, 17 September 2013


Full id: C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature



Phase1 CAGE Peaks

Hg19::chr10:103662491..103662497,+p@chr10:103662491..103662497
+
Hg19::chr10:104536836..104536854,-p@chr10:104536836..104536854
-
Hg19::chr10:104536871..104536888,-p@chr10:104536871..104536888
-
Hg19::chr10:126315568..126315574,-p@chr10:126315568..126315574
-
Hg19::chr10:126339118..126339152,+p@chr10:126339118..126339152
+
Hg19::chr10:43428400..43428412,+p@chr10:43428400..43428412
+
Hg19::chr10:72253384..72253425,+p@chr10:72253384..72253425
+
Hg19::chr10:72254756..72254791,-p@chr10:72254756..72254791
-
Hg19::chr10:73454625..73454650,+p@chr10:73454625..73454650
+
Hg19::chr10:91596826..91596839,+p@chr10:91596826..91596839
+
Hg19::chr10:91648654..91648691,+p@chr10:91648654..91648691
+
Hg19::chr10:91648716..91648724,+p@chr10:91648716..91648724
+
Hg19::chr10:91648780..91648791,+p@chr10:91648780..91648791
+
Hg19::chr10:91648797..91648811,+p@chr10:91648797..91648811
+
Hg19::chr10:91648821..91648839,+p@chr10:91648821..91648839
+
Hg19::chr10:98478374..98478407,+p@chr10:98478374..98478407
+
Hg19::chr11:123301142..123301165,+p3@ENST00000533341
p3@uc001pyu.2
Hg19::chr11:123301167..123301182,+p9@ENST00000533341
p9@uc001pyu.2
Hg19::chr11:123301202..123301218,+p7@ENST00000533341
p7@uc001pyu.2
Hg19::chr11:123301286..123301312,+p5@ENST00000533341
p5@uc001pyu.2
Hg19::chr11:59051831..59051840,-p1@ENST00000399003
Hg19::chr11:61124292..61124301,-p18@CYBASC3
Hg19::chr11:628252..628271,-p@chr11:628252..628271
-
Hg19::chr11:628558..628590,-p@chr11:628558..628590
-
Hg19::chr11:629346..629350,-p@chr11:629346..629350
-
Hg19::chr11:63994369..63994423,+p3@NUDT22
Hg19::chr11:63994425..63994440,+p5@NUDT22
Hg19::chr11:63997657..63997662,-p2@CU675262
Hg19::chr11:64002335..64002342,+p8@VEGFB
Hg19::chr11:64002634..64002651,+p@chr11:64002634..64002651
+
Hg19::chr11:64108369..64108380,+p@chr11:64108369..64108380
+
Hg19::chr11:64108398..64108415,+p@chr11:64108398..64108415
+
Hg19::chr11:64128317..64128331,+p6@RPS6KA4
Hg19::chr11:72832698..72832702,-p@chr11:72832698..72832702
-
Hg19::chr11:72852885..72852935,+p@chr11:72852885..72852935
+
Hg19::chr11:72853022..72853031,-p12@FCHSD2
Hg19::chr11:72853103..72853151,-p2@FCHSD2
Hg19::chr11:72853498..72853507,-p9@FCHSD2
Hg19::chr12:104322755..104322760,-p@chr12:104322755..104322760
-
Hg19::chr12:105380525..105380559,-p@chr12:105380525..105380559
-
Hg19::chr12:111537227..111537239,+p7@CUX2
Hg19::chr12:111845114..111845126,+p@chr12:111845114..111845126
+
Hg19::chr12:122231740..122231757,-p4@RHOF
Hg19::chr12:129308303..129308317,-p3@SLC15A4
Hg19::chr12:129308335..129308346,-p5@SLC15A4
Hg19::chr12:129308455..129308482,-p2@SLC15A4
Hg19::chr12:132541629..132541634,-p@chr12:132541629..132541634
-
Hg19::chr12:133172433..133172443,+p@chr12:133172433..133172443
+
Hg19::chr12:133346886..133346907,+p@chr12:133346886..133346907
+
Hg19::chr12:133349385..133349413,+p@chr12:133349385..133349413
+
Hg19::chr12:1702589..1702600,-p9@FBXL14
Hg19::chr12:52397654..52397658,+p@chr12:52397654..52397658
+
Hg19::chr12:52463884..52463905,+p3@C12orf44
Hg19::chr12:57882200..57882215,+p17@MARS
Hg19::chr12:57882685..57882720,+p21@MARS
Hg19::chr12:58149447..58149465,+p5@MARCH9
Hg19::chr12:77158059..77158070,+p3@ZDHHC17
Hg19::chr12:77160173..77160180,+p@chr12:77160173..77160180
+
Hg19::chr12:7899944..7899955,-p3@CLEC4C
Hg19::chr12:7899958..7899984,-p1@CLEC4C
Hg19::chr12:7902131..7902142,-p4@CLEC4C
Hg19::chr13:114557464..114557469,+p@chr13:114557464..114557469
+
Hg19::chr13:60902553..60902562,+p@chr13:60902553..60902562
+
Hg19::chr13:76056749..76056796,-p5@TBC1D4
Hg19::chr14:105391147..105391158,+p2@PLD4
Hg19::chr14:105391172..105391177,+p3@PLD4
Hg19::chr14:105391181..105391241,+p1@PLD4
Hg19::chr14:106331053..106331077,-p1@IGHJ2P
Hg19::chr14:106331447..106331468,-p1@IGHJ2
Hg19::chr14:106331487..106331493,-p3@uc001ysn.1
Hg19::chr14:106332200..106332250,-p1@IGHJ1P
Hg19::chr14:107252947..107252977,-p@chr14:107252947..107252977
-
Hg19::chr14:107253188..107253199,+p@chr14:107253188..107253199
+
Hg19::chr14:107253280..107253297,+p@chr14:107253280..107253297
+
Hg19::chr14:20905853..20905865,+p1@ENST00000553568
Hg19::chr14:20905882..20905893,+p2@ENST00000553568
Hg19::chr14:21259592..21259624,+p@chr14:21259592..21259624
+
Hg19::chr14:21259636..21259644,+p@chr14:21259636..21259644
+
Hg19::chr14:25101628..25101641,-p@chr14:25101628..25101641
-
Hg19::chr14:25101897..25101939,+p@chr14:25101897..25101939
+
Hg19::chr14:25103431..25103449,-p2@GZMB
Hg19::chr14:34419672..34419694,-p6@EGLN3
Hg19::chr14:68233218..68233229,-p@chr14:68233218..68233229
-
Hg19::chr14:69951439..69951452,+p2@PLEKHD1
Hg19::chr14:69951457..69951471,+p3@PLEKHD1
Hg19::chr14:70375059..70375088,+p@chr14:70375059..70375088
+
Hg19::chr15:31619119..31619131,+p14@KLF13
Hg19::chr15:31619140..31619152,+p11@KLF13
Hg19::chr15:31619200..31619211,+p12@KLF13
Hg19::chr15:72209237..72209246,-p@chr15:72209237..72209246
-
Hg19::chr15:74679677..74679684,+p@chr15:74679677..74679684
+
Hg19::chr15:75162647..75162670,+p@chr15:75162647..75162670
+
Hg19::chr15:75303993..75304011,+p9@SCAMP5
Hg19::chr15:75304015..75304027,+p14@SCAMP5
Hg19::chr15:75304053..75304061,+p26@SCAMP5
Hg19::chr15:91433129..91433138,+p11@FES
Hg19::chr16:134974..134979,-p@chr16:134974..134979
-
Hg19::chr16:21313936..21313941,-p@chr16:21313936..21313941
-
Hg19::chr16:2737269..2737281,-p@chr16:2737269..2737281
-
Hg19::chr16:31469618..31469642,+p4@ARMC5
Hg19::chr16:31469652..31469665,+p10@ARMC5
Hg19::chr16:53096041..53096055,+p@chr16:53096041..53096055
+
Hg19::chr16:53133756..53133758,-p@chr16:53133756..53133758
-
Hg19::chr16:56903804..56903818,+p@chr16:56903804..56903818
+
Hg19::chr16:56904102..56904111,+p@chr16:56904102..56904111
+
Hg19::chr16:579331..579368,-p@chr16:579331..579368
-
Hg19::chr16:67360856..67360885,+p@chr16:67360856..67360885
+
Hg19::chr16:67564218..67564227,-p@chr16:67564218..67564227
-
Hg19::chr16:67564498..67564514,+p@chr16:67564498..67564514
+
Hg19::chr16:68291415..68291419,+p@chr16:68291415..68291419
+
Hg19::chr16:68404878..68404887,-p@chr16:68404878..68404887
-
Hg19::chr16:68404908..68404919,-p@chr16:68404908..68404919
-
Hg19::chr16:68404926..68404949,-p@chr16:68404926..68404949
-
Hg19::chr16:68404951..68404975,-p@chr16:68404951..68404975
-
Hg19::chr16:68404977..68405010,-p@chr16:68404977..68405010
-
Hg19::chr16:771364..771376,-p@chr16:771364..771376
-
Hg19::chr16:85936412..85936431,+p2@IRF8
Hg19::chr16:85936488..85936492,+p10@IRF8
Hg19::chr16:85936515..85936521,+p8@IRF8
Hg19::chr16:85936539..85936562,+p3@IRF8
Hg19::chr16:85936600..85936623,+p4@IRF8
Hg19::chr16:86018628..86018633,-p@chr16:86018628..86018633
-
Hg19::chr16:9056719..9056739,+p@chr16:9056719..9056739
+
Hg19::chr17:1674296..1674304,+p@chr17:1674296..1674304
+
Hg19::chr17:1674956..1674967,+p@chr17:1674956..1674967
+
Hg19::chr17:1674976..1674981,+p@chr17:1674976..1674981
+
Hg19::chr17:1674982..1675041,+p@chr17:1674982..1675041
+
Hg19::chr17:1680853..1680858,-p4@CU680723
Hg19::chr17:16892517..16892527,-p@chr17:16892517..16892527
-
Hg19::chr17:16892573..16892578,-p@chr17:16892573..16892578
-
Hg19::chr17:184975..184999,-p@chr17:184975..184999
-
Hg19::chr17:27065136..27065144,+p@chr17:27065136..27065144
+
Hg19::chr17:27065169..27065184,+p@chr17:27065169..27065184
+
Hg19::chr17:27070817..27070825,-p@chr17:27070817..27070825
-
Hg19::chr17:27895110..27895133,+p@chr17:27895110..27895133
+
Hg19::chr17:27895502..27895516,-p@chr17:27895502..27895516
-
Hg19::chr17:27895517..27895586,-p@chr17:27895517..27895586
-
Hg19::chr17:3817642..3817688,-p@chr17:3817642..3817688
-
Hg19::chr17:3819314..3819331,-p@chr17:3819314..3819331
-
Hg19::chr17:3819466..3819477,+p@chr17:3819466..3819477
+
Hg19::chr17:40134345..40134392,-p@chr17:40134345..40134392
-
Hg19::chr17:40134422..40134444,-p@chr17:40134422..40134444
-
Hg19::chr17:55950708..55950726,-p@chr17:55950708..55950726
-
Hg19::chr17:55950729..55950745,-p@chr17:55950729..55950745
-
Hg19::chr17:55950784..55950789,-p@chr17:55950784..55950789
-
Hg19::chr17:62774949..62774990,-p@chr17:62774949..62774990
-
Hg19::chr17:66507965..66507969,-p@chr17:66507965..66507969
-
Hg19::chr17:73266616..73266630,-p6@MIF4GD
Hg19::chr17:74476945..74476989,+p@chr17:74476945..74476989
+
Hg19::chr17:7905524..7905565,+p2@GUCY2D
Hg19::chr18:13612501..13612506,+p11@C18orf1
Hg19::chr18:13612559..13612571,+p@chr18:13612559..13612571
+
Hg19::chr18:13612587..13612600,+p@chr18:13612587..13612600
+
Hg19::chr18:13612613..13612630,+p@chr18:13612613..13612630
+
Hg19::chr18:42134920..42134924,-p@chr18:42134920..42134924
-
Hg19::chr18:42136405..42136416,-p@chr18:42136405..42136416
-
Hg19::chr18:42136420..42136431,-p@chr18:42136420..42136431
-
Hg19::chr18:42136436..42136446,-p@chr18:42136436..42136446
-
Hg19::chr18:52989565..52989623,-p9@TCF4
Hg19::chr18:53253077..53253100,-p46@TCF4
Hg19::chr18:53253297..53253322,-p30@TCF4
Hg19::chr18:53255839..53255854,-p13@TCF4
Hg19::chr18:53257001..53257015,-p5@TCF4
Hg19::chr18:72265670..72265694,-p@chr18:72265670..72265694
-
Hg19::chr18:77551694..77551703,-p@chr18:77551694..77551703
-
Hg19::chr18:77552400..77552414,-p@chr18:77552400..77552414
-
Hg19::chr18:77558264..77558310,+p@chr18:77558264..77558310
+
Hg19::chr19:10677541..10677555,-p@chr19:10677541..10677555
-
Hg19::chr19:11146457..11146463,-p@chr19:11146457..11146463
-
Hg19::chr19:12721790..12721810,+p2@ZNF791
Hg19::chr19:16699274..16699288,-p1@BC030138
Hg19::chr19:16699291..16699310,-p2@BC030138
Hg19::chr19:17638147..17638152,+p3@FAM129C
Hg19::chr19:3124816..3124817,-p@chr19:3124816..3124817
-
Hg19::chr19:35763394..35763429,-p@chr19:35763394..35763429
-
Hg19::chr19:4432022..4432053,+p@chr19:4432022..4432053
+
Hg19::chr19:4432075..4432086,+p@chr19:4432075..4432086
+
Hg19::chr19:4432113..4432122,+p@chr19:4432113..4432122
+
Hg19::chr19:50848009..50848031,-p1@NAPSB
Hg19::chr19:5336455..5336460,+p@chr19:5336455..5336460
+
Hg19::chr19:5336483..5336493,+p@chr19:5336483..5336493
+
Hg19::chr19:5336498..5336527,+p@chr19:5336498..5336527
+
Hg19::chr19:5336629..5336637,+p@chr19:5336629..5336637
+
Hg19::chr19:5338459..5338468,-p@chr19:5338459..5338468
-
Hg19::chr19:5338474..5338498,-p@chr19:5338474..5338498
-
Hg19::chr19:5338776..5338816,+p@chr19:5338776..5338816
+
Hg19::chr19:54850347..54850359,-p3@LILRA4
Hg19::chr19:54850385..54850414,-p2@LILRA4
Hg19::chr19:54850417..54850439,-p1@LILRA4
Hg19::chr19:54850440..54850447,-p4@LILRA4
Hg19::chr19:56623811..56623815,-p@chr19:56623811..56623815
-
Hg19::chr19:661624..661638,+p@chr19:661624..661638
+
Hg19::chr19:662430..662439,+p@chr19:662430..662439
+
Hg19::chr1:113257796..113257811,-p2@PPM1J
Hg19::chr1:113257882..113257896,-p3@PPM1J
Hg19::chr1:145589059..145589070,-p3@NUDT17
Hg19::chr1:157108728..157108744,-p5@ETV3
Hg19::chr1:157147914..157147931,+p@chr1:157147914..157147931
+
Hg19::chr1:1710244..1710261,-p5@NADK
Hg19::chr1:174188378..174188390,+p13@RABGAP1L
Hg19::chr1:18024159..18024163,-p@chr1:18024159..18024163
-
Hg19::chr1:192508293..192508307,+p@chr1:192508293..192508307
+
Hg19::chr1:196057864..196057881,-p@chr1:196057864..196057881
-
Hg19::chr1:206306107..206306143,-p1@ENST00000436158
p1@ENST00000455672
Hg19::chr1:210502330..210502350,+p3@HHAT
Hg19::chr1:212968135..212968164,+p3@TATDN3
Hg19::chr1:22109425..22109430,-p19@USP48
Hg19::chr1:243419000..243419003,+p8@SDCCAG8
Hg19::chr1:244214455..244214479,-p@chr1:244214455..244214479
-
Hg19::chr1:244214655..244214666,+p7@ZNF238
Hg19::chr1:53833780..53833801,-p2@ENST00000449958
Hg19::chr1:53833812..53833826,-p1@ENST00000449958
Hg19::chr1:53834681..53834688,-p@chr1:53834681..53834688
-
Hg19::chr1:53834714..53834761,-p@chr1:53834714..53834761
-
Hg19::chr1:66169696..66169704,+p@chr1:66169696..66169704
+
Hg19::chr1:66169737..66169756,+p@chr1:66169737..66169756
+
Hg19::chr1:8014089..8014102,+p8@PARK7
Hg19::chr1:92948492..92948508,-p@chr1:92948492..92948508
-
Hg19::chr1:92948515..92948532,-p@chr1:92948515..92948532
-
Hg19::chr1:92948792..92948807,-p@chr1:92948792..92948807
-
Hg19::chr1:92950138..92950159,-p4@GFI1
Hg19::chr20:23029606..23029614,-p17@THBD
Hg19::chr20:23029620..23029640,-p5@THBD
Hg19::chr20:23029668..23029678,-p14@THBD
Hg19::chr20:23029700..23029711,-p2@AB587391
Hg19::chr20:23029956..23029963,+p@chr20:23029956..23029963
+
Hg19::chr20:23029975..23029997,+p@chr20:23029975..23029997
+
Hg19::chr20:23211928..23211934,+p@chr20:23211928..23211934
+
Hg19::chr20:32829196..32829232,+p1@AY805393
Hg19::chr20:42310300..42310312,+p@chr20:42310300..42310312
+
Hg19::chr20:42310399..42310415,+p@chr20:42310399..42310415
+
Hg19::chr20:42339625..42339640,+p@chr20:42339625..42339640
+
Hg19::chr20:42340062..42340071,+p@chr20:42340062..42340071
+
Hg19::chr20:42697364..42697377,+p@chr20:42697364..42697377
+
Hg19::chr20:4803645..4803654,+p@chr20:4803645..4803654
+
Hg19::chr20:56255237..56255246,-p@chr20:56255237..56255246
-
Hg19::chr20:56255254..56255266,-p@chr20:56255254..56255266
-
Hg19::chr20:9491518..9491543,+p@chr20:9491518..9491543
+
Hg19::chr21:26779622..26779662,-p@chr21:26779622..26779662
-
Hg19::chr21:43723219..43723257,-p@chr21:43723219..43723257
-
Hg19::chr21:44529290..44529301,+p@chr21:44529290..44529301
+
Hg19::chr21:45602441..45602448,+p@chr21:45602441..45602448
+
Hg19::chr21:45602458..45602471,+p@chr21:45602458..45602471
+
Hg19::chr22:23241776..23241804,+p2@AL713800
Hg19::chr22:24180746..24180778,-p3@DERL3
Hg19::chr22:24180788..24180805,-p6@DERL3
Hg19::chr22:24180954..24180971,-p7@DERL3
Hg19::chr22:24180978..24180996,-p5@DERL3
Hg19::chr22:24181174..24181200,-p1@DERL3
Hg19::chr22:24181278..24181309,-p4@DERL3
Hg19::chr22:24181616..24181622,+p@chr22:24181616..24181622
+
Hg19::chr22:24181629..24181642,+p@chr22:24181629..24181642
+
Hg19::chr22:24181653..24181663,+p@chr22:24181653..24181663
+
Hg19::chr22:24186544..24186557,-p@chr22:24186544..24186557
-
Hg19::chr22:47070305..47070317,-p@chr22:47070305..47070317
-
Hg19::chr22:47070490..47070513,+p3@GRAMD4
Hg19::chr22:47070544..47070559,+p6@GRAMD4
Hg19::chr2:102972723..102972746,+p6@IL18R1
Hg19::chr2:128180735..128180740,-p@chr2:128180735..128180740
-
Hg19::chr2:128180842..128180878,+p2@PROC
Hg19::chr2:128180886..128180901,+p4@PROC
Hg19::chr2:135733382..135733418,+p@chr2:135733382..135733418
+
Hg19::chr2:153415904..153415907,+p@chr2:153415904..153415907
+
Hg19::chr2:220465618..220465623,+p7@STK11IP
Hg19::chr2:220466117..220466127,+p5@STK11IP
Hg19::chr2:220466151..220466157,+p11@STK11IP
Hg19::chr2:37319280..37319302,+p@chr2:37319280..37319302
+
Hg19::chr2:38977760..38977793,-p@chr2:38977760..38977793
-
Hg19::chr2:60639257..60639280,-p@chr2:60639257..60639280
-
Hg19::chr2:60639281..60639304,-p@chr2:60639281..60639304
-
Hg19::chr2:60639314..60639338,-p@chr2:60639314..60639338
-
Hg19::chr2:60639343..60639352,-p@chr2:60639343..60639352
-
Hg19::chr2:60782262..60782286,-p@chr2:60782262..60782286
-
Hg19::chr2:60782577..60782593,-p@chr2:60782577..60782593
-
Hg19::chr2:60782745..60782752,+p@chr2:60782745..60782752
+
Hg19::chr2:89158038..89158051,+p@chr2:89158038..89158051
+
Hg19::chr2:89161432..89161449,-p2@IGKJ1
Hg19::chr2:89161453..89161485,-p1@IGKJ1
Hg19::chr2:89161486..89161493,-p1@ENST00000418209
Hg19::chr2:89161517..89161528,-p2@ENST00000418209
Hg19::chr2:89161568..89161575,-p4@ENST00000418209
Hg19::chr2:89162070..89162082,-p@chr2:89162070..89162082
-
Hg19::chr2:89165515..89165526,-p2@ENST00000430694
p2@uc002stj.1
Hg19::chr2:89165531..89165542,-p3@ENST00000430694
p3@uc002stj.1
Hg19::chr2:89165569..89165580,-p5@ENST00000430694
p5@uc002stj.1
Hg19::chr2:89165603..89165608,-p10@ENST00000430694
p10@uc002stj.1
Hg19::chr2:89165668..89165669,-p9@ENST00000430694
p9@uc002stj.1
Hg19::chr2:99158646..99158653,+p@chr2:99158646..99158653
+
Hg19::chr2:99165457..99165496,-p@chr2:99165457..99165496
-
Hg19::chr2:99173256..99173285,-p@chr2:99173256..99173285
-
Hg19::chr2:99181476..99181492,+p@chr2:99181476..99181492
+
Hg19::chr3:113344763..113344777,+p7@SIDT1
Hg19::chr3:113344781..113344796,+p3@SIDT1
Hg19::chr3:191046810..191046860,+p6@CCDC50
Hg19::chr3:191047018..191047047,+p3@CCDC50
Hg19::chr3:191047053..191047089,+p4@CCDC50
Hg19::chr3:197476196..197476224,-p6@KIAA0226
Hg19::chr3:44552073..44552084,-p2@ZNF852
Hg19::chr3:46077062..46077087,+p@chr3:46077062..46077087
+
Hg19::chr3:47205402..47205411,-p11@SETD2
Hg19::chr3:50365569..50365570,-p3@TUSC2
Hg19::chr3:5053214..5053223,-p@chr3:5053214..5053223
-
Hg19::chr3:57260377..57260399,-p2@HESX1
Hg19::chr3:58186767..58186823,-p@chr3:58186767..58186823
-
Hg19::chr3:58200310..58200326,-p5@DNASE1L3
Hg19::chr3:58200329..58200340,-p8@DNASE1L3
Hg19::chr3:58200409..58200438,-p4@DNASE1L3
Hg19::chr3:88198944..88198962,+p7@C3orf38
Hg19::chr4:10096507..10096525,-p21@WDR1
Hg19::chr4:152330024..152330050,-p1@ENST00000508847
Hg19::chr4:152833989..152834007,+p@chr4:152833989..152834007
+
Hg19::chr4:152834021..152834065,+p@chr4:152834021..152834065
+
Hg19::chr4:156536533..156536549,+p@chr4:156536533..156536549
+
Hg19::chr4:156536620..156536641,+p@chr4:156536620..156536641
+
Hg19::chr4:38745751..38745762,+p@chr4:38745751..38745762
+
Hg19::chr4:71768164..71768177,+p3@MOB1B
Hg19::chr4:71862994..71863029,+p@chr4:71862994..71863029
+
Hg19::chr4:71863041..71863059,+p@chr4:71863041..71863059
+
Hg19::chr4:786606..786618,-p11@CPLX1
Hg19::chr4:8200703..8200720,+p9@SH3TC1
Hg19::chr4:8200756..8200765,+p17@SH3TC1
Hg19::chr5:115412419..115412448,+p@chr5:115412419..115412448
+
Hg19::chr5:138725522..138725542,-p3@MZB1
Hg19::chr5:156927169..156927191,+p@chr5:156927169..156927191
+
Hg19::chr5:1799180..1799192,+p@chr5:1799180..1799192
+
Hg19::chr5:43519263..43519271,+p@chr5:43519263..43519271
+
Hg19::chr5:94417523..94417560,-p5@MCTP1
Hg19::chr5:94417562..94417578,-p8@MCTP1
Hg19::chr6:11731299..11731308,+p@chr6:11731299..11731308
+
Hg19::chr6:135644422..135644432,-p12@AHI1
Hg19::chr6:135664055..135664088,-p@chr6:135664055..135664088
-
Hg19::chr6:167369681..167369748,-p1@ENST00000507747
Hg19::chr6:32190527..32190536,-p@chr6:32190527..32190536
-
Hg19::chr6:341268..341280,-p@chr6:341268..341280
-
Hg19::chr6:342279..342288,+p@chr6:342279..342288
+
Hg19::chr6:35016594..35016638,+p@chr6:35016594..35016638
+
Hg19::chr6:35026759..35026770,-p@chr6:35026759..35026770
-
Hg19::chr6:394018..394029,-p@chr6:394018..394029
-
Hg19::chr6:394034..394046,-p@chr6:394034..394046
-
Hg19::chr6:401614..401625,+p@chr6:401614..401625
+
Hg19::chr6:42883784..42883804,+p1@PTCRA
Hg19::chr6:42896754..42896799,-p@chr6:42896754..42896799
-
Hg19::chr6:42897990..42898012,+p@chr6:42897990..42898012
+
Hg19::chr6:45390164..45390195,-p@chr6:45390164..45390195
-
Hg19::chr6:45390300..45390335,+p4@RUNX2
Hg19::chr6:45390599..45390662,+p11@RUNX2
Hg19::chr6:47445214..47445218,-p@chr6:47445214..47445218
-
Hg19::chr6:47445710..47445738,+p6@CD2AP
Hg19::chr6:47445745..47445788,+p4@CD2AP
Hg19::chr6:90062888..90062899,-p6@UBE2J1
Hg19::chr7:101821643..101821681,+p@chr7:101821643..101821681
+
Hg19::chr7:130809261..130809298,+p@chr7:130809261..130809298
+
Hg19::chr7:141998782..141998789,+p8@TRBV1
Hg19::chr7:150130792..150130825,+p1@ENST00000486954
Hg19::chr7:1961711..1961753,-p@chr7:1961711..1961753
-
Hg19::chr7:2271845..2271865,+p@chr7:2271845..2271865
+
Hg19::chr7:3018447..3018480,+p@chr7:3018447..3018480
+
Hg19::chr7:3020194..3020229,-p@chr7:3020194..3020229
-
Hg19::chr7:3020230..3020251,-p@chr7:3020230..3020251
-
Hg19::chr7:37860907..37860918,+p2@ENST00000437554
Hg19::chr7:37860926..37860937,+p1@ENST00000437554
Hg19::chr7:4773446..4773457,-p@chr7:4773446..4773457
-
Hg19::chr7:4779412..4779420,-p@chr7:4779412..4779420
-
Hg19::chr7:4784283..4784288,-p@chr7:4784283..4784288
-
Hg19::chr7:51224469..51224486,-p@chr7:51224469..51224486
-
Hg19::chr8:11324020..11324031,-p@chr8:11324020..11324031
-
Hg19::chr8:11351970..11351981,+p12@BLK
Hg19::chr8:119294412..119294441,+p3@ENST00000366457
Hg19::chr8:119294456..119294486,+p1@ENST00000366457
Hg19::chr8:119294494..119294511,+p1@ENST00000449065
Hg19::chr8:135613849..135613883,-p7@ZFAT
Hg19::chr8:135613895..135613921,-p8@ZFAT
Hg19::chr8:135614062..135614073,-p14@ZFAT
Hg19::chr8:135614084..135614119,-p4@ZFAT
Hg19::chr8:135614120..135614149,-p5@ZFAT
Hg19::chr8:135614159..135614170,-p13@ZFAT
Hg19::chr8:135614204..135614209,-p22@ZFAT
Hg19::chr8:135652051..135652065,-p21@ZFAT
Hg19::chr8:135671985..135672023,-p@chr8:135671985..135672023
-
Hg19::chr9:101984719..101984730,+p3@SEC61B
Hg19::chr9:114840910..114840925,-p@chr9:114840910..114840925
-
Hg19::chr9:114840937..114840961,-p@chr9:114840937..114840961
-
Hg19::chr9:124241522..124241536,-p@chr9:124241522..124241536
-
Hg19::chr9:128582969..128582976,+p@chr9:128582969..128582976
+
Hg19::chr9:130678316..130678327,+p@chr9:130678316..130678327
+
Hg19::chr9:130678336..130678345,+p@chr9:130678336..130678345
+
Hg19::chr9:130678352..130678361,+p@chr9:130678352..130678361
+
Hg19::chr9:139596265..139596289,-p@chr9:139596265..139596289
-
Hg19::chr9:139606415..139606418,+p@chr9:139606415..139606418
+
Hg19::chr9:139694777..139694789,+p2@KIAA1984
Hg19::chr9:139694790..139694804,+p4@C9orf86
Hg19::chr9:139694809..139694825,+p5@C9orf86
Hg19::chr9:139694828..139694859,+p3@C9orf86
Hg19::chr9:139879342..139879362,+p6@LCNL1
Hg19::chr9:139887213..139887255,+p2@C9orf142
Hg19::chr9:139887321..139887335,+p5@C9orf142
Hg19::chr9:139887338..139887389,+p3@C9orf142
Hg19::chr9:139890798..139890821,-p5@CLIC3
Hg19::chr9:139890864..139890876,-p10@CLIC3
Hg19::chr9:139891110..139891130,+p@chr9:139891110..139891130
+
Hg19::chr9:139891505..139891536,-p12@CLIC3
Hg19::chr9:140062651..140062657,-p@chr9:140062651..140062657
-
Hg19::chr9:140064045..140064052,+p@chr9:140064045..140064052
+
Hg19::chr9:19230548..19230598,+p@chr9:19230548..19230598
+
Hg19::chr9:35833866..35833870,-p@chr9:35833866..35833870
-
Hg19::chr9:35846267..35846282,+p@chr9:35846267..35846282
+
Hg19::chr9:94935693..94935702,-p@chr9:94935693..94935702
-
Hg19::chr9:94935773..94935787,-p@chr9:94935773..94935787
-
Hg19::chrX:13778731..13778742,+p7@OFD1
Hg19::chrX:22056318..22056323,+p8@PHEX
Hg19::chrX:22056350..22056355,+p11@PHEX
Hg19::chrX:22056377..22056388,+p4@PHEX
Hg19::chrX:22056423..22056428,+p13@PHEX
Hg19::chrX:22056435..22056446,+p3@PHEX


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0003702RNA polymerase II transcription factor activity0.0119727516496982
GO:0005515protein binding0.0138965815428835
GO:0007242intracellular signaling cascade0.0219847442103654
GO:0006357regulation of transcription from RNA polymerase II promoter0.0296845419904631



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Cell Type
Ontology termp-valuen
plasmacytoid dendritic cell2.96e-473
single nucleate cell4.87e-463
mononuclear cell4.87e-463
circulating cell1.97e-236
basophil1.43e-213
dendritic cell2.02e-1310
granulocyte1.09e-088
Uber Anatomy
Ontology termp-valuen
hemopoietic organ7.54e-207
immune organ7.54e-207
tonsil1.93e-161
mucosa-associated lymphoid tissue1.93e-161
lymphoid tissue1.93e-161
tonsillar ring1.93e-161
thymus6.13e-164
hemolymphoid system gland6.13e-164
thymic region6.13e-164
pharyngeal gland6.13e-164
thymus primordium6.13e-164
chordate pharynx3.84e-1410
pharyngeal region of foregut3.84e-1410
pharynx6.48e-1311
pharyngeal epithelium5.93e-116
blood9.19e-1015
haemolymphatic fluid9.19e-1015
organism substance9.19e-1015
hemolymphoid system2.94e-08108
upper respiratory tract1.01e-0719
hematopoietic system4.76e-0798
blood island4.76e-0798
neck6.31e-0710
gland of gut6.31e-0710


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)
MA0003.10.381863
MA0004.10.328299
MA0006.10.342966
MA0007.10.0700275
MA0009.11.40814
MA0014.10.0502577
MA0017.10.00441224
MA0019.10.489731
MA0024.10.599789
MA0025.10.280877
MA0027.10.850186
MA0028.10.0574375
MA0029.11.38443
MA0030.10.465718
MA0031.10.524537
MA0038.10.0421125
MA0040.10.250706
MA0041.10.00108652
MA0042.10.00363749
MA0043.10.101254
MA0046.10.0148659
MA0048.120.1988
MA0050.10.747082
MA0051.10.464045
MA0052.11.18677
MA0055.140.9206
MA0056.10
MA0057.10.455625
MA0058.10.199584
MA0059.10.539777
MA0060.10.061699
MA0061.11.43657
MA0063.10
MA0066.10.383101
MA0067.10.0896251
MA0068.10.184641
MA0069.10.0875973
MA0070.10.0121933
MA0071.10.117792
MA0072.10.142406
MA0073.10.0269034
MA0074.10.576521
MA0076.10.0675957
MA0077.10.225382
MA0078.10.482819
MA0081.13.18046
MA0083.10.0187101
MA0084.10.229559
MA0087.10.2354
MA0088.11.22434
MA0089.10
MA0090.10.0690274
MA0091.18.11755
MA0092.10.0307659
MA0093.10.200714
MA0095.10
MA0098.10
MA0100.10.188191
MA0101.10.0292137
MA0103.110.5857
MA0105.11.61568
MA0106.10.738623
MA0107.10.0620844
MA0108.20.0593182
MA0109.10
MA0111.11.46558
MA0113.10.695763
MA0114.10.0377082
MA0115.10.0108198
MA0116.11.54978
MA0117.10.393962
MA0119.10.678264
MA0122.10.173098
MA0124.10.0385948
MA0125.10.250459
MA0130.10
MA0131.10.231148
MA0132.10
MA0133.10
MA0135.10.0244613
MA0136.10.955211
MA0139.11.19882
MA0140.10.075891
MA0141.10.363636
MA0142.10.00754628
MA0143.10.0715216
MA0144.10.162625
MA0145.12.22335
MA0146.10.436343
MA0147.10.472852
MA0148.10.000197319
MA0149.10.000536626
MA0062.20.108015
MA0035.20.0480655
MA0039.20.250517
MA0138.21.60233
MA0002.29.62951
MA0137.20.253299
MA0104.20.345583
MA0047.20.000841902
MA0112.22.71291
MA0065.20.0770082
MA0150.11.18449
MA0151.10
MA0152.10.034293
MA0153.10.049214
MA0154.12.88976
MA0155.11.02462
MA0156.11.36933
MA0157.10.14247
MA0158.10
MA0159.11.37728
MA0160.10.0758113
MA0161.10
MA0162.10.39157
MA0163.11.97391
MA0164.10.278031
MA0080.25.19797
MA0018.20.274419
MA0099.20.0864037
MA0079.20.0812973
MA0102.20.265769
MA0258.10.695868
MA0259.10.491815
MA0442.10



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
BATF#10538382.235740261129324.3826841135797e-060.000137289485944256
BCL11A#53335432.946585916558224.40869296087417e-104.31123112491327e-08
CTCF#106641021.320642874525730.001493356879320020.00954145963044803
EBF1#18791082.323426133887573.94539802589067e-178.1272864778303e-15
ELF1#19971221.254801813948110.002935123330542450.0156614389985451
IRF4#3662452.382012248559149.5444060382598e-085.6316848713549e-06
MEF2A#4205532.399495744471344.81563484558214e-093.88071055276044e-07
MEF2C#4208252.494647010424163.60572293952078e-050.000698013156775923
NFKB1#47901091.444924911200792.81991240645569e-050.000594967337005709
PAX5#50791111.788216845315793.80555088093323e-103.77443426831705e-08
POLR2A#54302201.141158692856950.004251337140321510.0202280364281566
POU2F2#5452631.385714530526040.005036090500207580.0234669279325025
SPI1#66881202.378064785079055.25676084299137e-201.33255059631353e-17
TCF12#69381203.082453594836641.25299991275138e-294.97574364592554e-27
ZEB1#6935622.529185471226372.40592385696892e-112.85212578544809e-09



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=Coexpression_cluster:C44&oldid=3067162"