FFCP PHASE1:Hg19::chr10:105670942..105670953,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105670942..105670953,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr10:105670942..105670953,+ | |description=CAGE_peak_at_chr10:105670942..105670953,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000738!4.81e-25!140;CL:0002057!5.13e-22!42;CL:0002087!9.48e-22!119;CL:0000037!7.31e-21!172;CL:0000566!7.31e-21!172;CL:0002031!1.34e-20!124;CL:0000860!2.41e-20!45;CL:0002032!2.87e-20!165;CL:0000837!2.87e-20!165;CL:0000988!2.24e-19!182;CL:0000766!2.60e-18!76;CL:0000839!1.28e-13!70;CL:0002194!2.12e-13!63;CL:0000576!2.12e-13!63;CL:0000040!2.12e-13!63;CL:0000559!2.12e-13!63;CL:0000557!2.20e-13!71;CL:0002009!6.65e-13!65;CL:0000791!7.36e-13!18;CL:0000789!7.36e-13!18;CL:0002420!7.36e-13!18;CL:0002419!7.36e-13!18;CL:0000790!7.36e-13!18;CL:0000763!1.26e-12!112;CL:0000049!1.26e-12!112;CL:0000084!5.16e-09!25;CL:0000827!5.16e-09!25;CL:0000624!2.35e-08!6;CL:0000623!6.00e-08!3;CL:0000825!6.00e-08!3;CL:0000838!6.34e-08!52;CL:0000767!7.65e-08!3;CL:0000542!9.64e-08!53;CL:0000051!9.64e-08!53;CL:0000625!2.40e-07!11;CL:0000134!8.79e-07!358 | |ontology_enrichment_celltype=CL:0000738!4.81e-25!140;CL:0002057!5.13e-22!42;CL:0002087!9.48e-22!119;CL:0000037!7.31e-21!172;CL:0000566!7.31e-21!172;CL:0002031!1.34e-20!124;CL:0000860!2.41e-20!45;CL:0002032!2.87e-20!165;CL:0000837!2.87e-20!165;CL:0000988!2.24e-19!182;CL:0000766!2.60e-18!76;CL:0000839!1.28e-13!70;CL:0002194!2.12e-13!63;CL:0000576!2.12e-13!63;CL:0000040!2.12e-13!63;CL:0000559!2.12e-13!63;CL:0000557!2.20e-13!71;CL:0002009!6.65e-13!65;CL:0000791!7.36e-13!18;CL:0000789!7.36e-13!18;CL:0002420!7.36e-13!18;CL:0002419!7.36e-13!18;CL:0000790!7.36e-13!18;CL:0000763!1.26e-12!112;CL:0000049!1.26e-12!112;CL:0000084!5.16e-09!25;CL:0000827!5.16e-09!25;CL:0000624!2.35e-08!6;CL:0000623!6.00e-08!3;CL:0000825!6.00e-08!3;CL:0000838!6.34e-08!52;CL:0000767!7.65e-08!3;CL:0000542!9.64e-08!53;CL:0000051!9.64e-08!53;CL:0000625!2.40e-07!11;CL:0000134!8.79e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.55e-43;33!CL:0002057;2.55e-43;33!CL:0000473;1.63e-31;39!CL:0000234;1.63e-31;39!CL:0000576;1.17e-24;48!CL:0000766;1.50e-10;69!CL:0000763;2.89e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;2.55e-43;33!CL:0002057;2.55e-43;33!CL:0000473;1.63e-31;39!CL:0000234;1.63e-31;39!CL:0000576;1.17e-24;48!CL:0000766;1.50e-10;69!CL:0000763;2.89e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.50e-38,42;CL:0002057,9.50e-38,42;CL:0000473,5.23e-33,48;CL:0000234,5.23e-33,48;CL:0002194,2.32e-26,59;CL:0000576,2.32e-26,59;CL:0000040,2.32e-26,59;CL:0000559,2.32e-26,59;CL:0002009,1.67e-25,61;CL:0000839,1.40e-23,66;CL:0000557,3.14e-23,67;CL:0000766,1.28e-21,72;CL:0002087,1.17e-16,115;CL:0002031,5.91e-16,120;CL:0000763,2.31e-14,108;CL:0000049,2.31e-14,108;CL:0000738,4.83e-14,136;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.36e-29;42 | |ontology_enrichment_development_v019=CL:0002057;6.36e-29;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.18e-13!80;UBERON:0002390!1.20e-12!102;UBERON:0003061!1.20e-12!102;UBERON:0001474!4.53e-12!86;UBERON:0002193!3.55e-11!112;UBERON:0004765!8.65e-10!101;UBERON:0001434!8.65e-10!101;UBERON:0002405!3.35e-08!115 | |ontology_enrichment_uberon=UBERON:0002371!3.18e-13!80;UBERON:0002390!1.20e-12!102;UBERON:0003061!1.20e-12!102;UBERON:0001474!4.53e-12!86;UBERON:0002193!3.55e-11!112;UBERON:0004765!8.65e-10!101;UBERON:0001434!8.65e-10!101;UBERON:0002405!3.35e-08!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.77e-20,76;UBERON:0001474,5.63e-19,82;UBERON:0004765,2.81e-17,90;UBERON:0002405,1.03e-16,93;UBERON:0002390,7.49e-16,98;UBERON:0003061,7.49e-16,98;UBERON:0001434,1.57e-15,100;UBERON:0002193,2.31e-14,108;UBERON:0002204,3.74e-09,167;UBERON:0003081,1.94e-07,203 | |||
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|short_description=p@chr10:105670942..105670953,+ | |short_description=p@chr10:105670942..105670953,+ | ||
}} | }} |
Latest revision as of 10:03, 23 July 2015
Short description: | p@chr10:105670942..105670953, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105670942..105670953, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.50e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.50e-38 | 42 |
defensive cell | 5.23e-33 | 48 |
phagocyte | 5.23e-33 | 48 |
monopoietic cell | 2.32e-26 | 59 |
monocyte | 2.32e-26 | 59 |
monoblast | 2.32e-26 | 59 |
promonocyte | 2.32e-26 | 59 |
macrophage dendritic cell progenitor | 1.67e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.40e-23 | 66 |
granulocyte monocyte progenitor cell | 3.14e-23 | 67 |
myeloid leukocyte | 1.28e-21 | 72 |
nongranular leukocyte | 1.17e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.91e-16 | 120 |
myeloid cell | 2.31e-14 | 108 |
common myeloid progenitor | 2.31e-14 | 108 |
leukocyte | 4.83e-14 | 136 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.77e-20 | 76 |
bone element | 5.63e-19 | 82 |
skeletal element | 2.81e-17 | 90 |
immune system | 1.03e-16 | 93 |
hematopoietic system | 7.49e-16 | 98 |
blood island | 7.49e-16 | 98 |
skeletal system | 1.57e-15 | 100 |
hemolymphoid system | 2.31e-14 | 108 |
musculoskeletal system | 3.74e-09 | 167 |
lateral plate mesoderm | 1.94e-07 | 203 |