FFCP PHASE1:Hg19::chr10:64504029..64504040,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:64504029..64504040,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr10:64504029..64504040,- | |description=CAGE_peak_at_chr10:64504029..64504040,- | ||
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|ontology_enrichment_celltype=CL:0002057!6.47e-91!42;CL:0000860!1.40e-84!45;CL:0002194!2.40e-74!63;CL:0000576!2.40e-74!63;CL:0000040!2.40e-74!63;CL:0000559!2.40e-74!63;CL:0002009!5.80e-72!65;CL:0000839!1.37e-66!70;CL:0000557!1.32e-65!71;CL:0000766!4.62e-61!76;CL:0000763!3.34e-40!112;CL:0000049!3.34e-40!112;CL:0002087!1.35e-37!119;CL:0002031!6.50e-36!124;CL:0000738!2.51e-31!140;CL:0002032!6.36e-26!165;CL:0000837!6.36e-26!165;CL:0000037!1.09e-24!172;CL:0000566!1.09e-24!172;CL:0000988!4.35e-23!182;CL:0000134!1.49e-11!358;CL:0002320!3.08e-11!365;CL:0000219!3.97e-10!390;CL:0000048!8.53e-09!430;CL:0000723!1.32e-08!436;CL:0000034!2.32e-08!444 | |ontology_enrichment_celltype=CL:0002057!6.47e-91!42;CL:0000860!1.40e-84!45;CL:0002194!2.40e-74!63;CL:0000576!2.40e-74!63;CL:0000040!2.40e-74!63;CL:0000559!2.40e-74!63;CL:0002009!5.80e-72!65;CL:0000839!1.37e-66!70;CL:0000557!1.32e-65!71;CL:0000766!4.62e-61!76;CL:0000763!3.34e-40!112;CL:0000049!3.34e-40!112;CL:0002087!1.35e-37!119;CL:0002031!6.50e-36!124;CL:0000738!2.51e-31!140;CL:0002032!6.36e-26!165;CL:0000837!6.36e-26!165;CL:0000037!1.09e-24!172;CL:0000566!1.09e-24!172;CL:0000988!4.35e-23!182;CL:0000134!1.49e-11!358;CL:0002320!3.08e-11!365;CL:0000219!3.97e-10!390;CL:0000048!8.53e-09!430;CL:0000723!1.32e-08!436;CL:0000034!2.32e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.52e-80;33!CL:0002057;5.52e-80;33!CL:0000473;7.09e-65;39!CL:0000234;7.09e-65;39!CL:0000576;6.56e-39;48!CL:0000766;6.63e-25;69!CL:0000763;6.21e-11;100!CL:0002087;1.37e-08;104 | |ontology_enrichment_celltype_v019=CL:0000860;5.52e-80;33!CL:0002057;5.52e-80;33!CL:0000473;7.09e-65;39!CL:0000234;7.09e-65;39!CL:0000576;6.56e-39;48!CL:0000766;6.63e-25;69!CL:0000763;6.21e-11;100!CL:0002087;1.37e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.52e-69,42;CL:0002057,4.52e-69,42;CL:0000473,3.24e-68,48;CL:0000234,3.24e-68,48;CL:0002194,3.04e-54,59;CL:0000576,3.04e-54,59;CL:0000040,3.04e-54,59;CL:0000559,3.04e-54,59;CL:0002009,1.94e-52,61;CL:0000839,2.12e-48,66;CL:0000557,1.16e-47,67;CL:0000766,2.79e-44,72;CL:0000763,4.54e-29,108;CL:0000049,4.54e-29,108;CL:0002087,3.33e-27,115;CL:0002031,5.28e-26,120;CL:0000738,9.52e-23,136;CL:0002032,6.10e-19,161;CL:0000837,6.10e-19,161;CL:0000037,4.47e-18,168;CL:0000988,4.61e-17,177;CL:0000134,1.68e-07,354;CL:0002320,2.59e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-54;42!CL:0000049;4.20e-09;108 | |ontology_enrichment_development_v019=CL:0002057;1.02e-54;42!CL:0000049;4.20e-09;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.86e-58!80;UBERON:0001474!1.53e-53!86;UBERON:0004765!5.11e-45!101;UBERON:0001434!5.11e-45!101;UBERON:0002390!1.54e-44!102;UBERON:0003061!1.54e-44!102;UBERON:0002193!3.34e-40!112;UBERON:0002405!4.78e-39!115;UBERON:0002204!1.47e-25!167;UBERON:0003081!9.60e-19!216;UBERON:0002384!8.29e-11!375;UBERON:0000926!2.29e-07!448;UBERON:0004120!2.29e-07!448;UBERON:0006603!2.29e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!7.86e-58!80;UBERON:0001474!1.53e-53!86;UBERON:0004765!5.11e-45!101;UBERON:0001434!5.11e-45!101;UBERON:0002390!1.54e-44!102;UBERON:0003061!1.54e-44!102;UBERON:0002193!3.34e-40!112;UBERON:0002405!4.78e-39!115;UBERON:0002204!1.47e-25!167;UBERON:0003081!9.60e-19!216;UBERON:0002384!8.29e-11!375;UBERON:0000926!2.29e-07!448;UBERON:0004120!2.29e-07!448;UBERON:0006603!2.29e-07!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.85e-42,76;UBERON:0001474,9.77e-39,82;UBERON:0004765,3.55e-35,90;UBERON:0002405,5.37e-34,93;UBERON:0002390,3.45e-32,98;UBERON:0003061,3.45e-32,98;UBERON:0001434,1.63e-31,100;UBERON:0002193,4.54e-29,108;UBERON:0002204,3.40e-18,167;UBERON:0003081,1.24e-14,203;UBERON:0000926,1.06e-08,315;UBERON:0004120,1.06e-08,315;UBERON:0006603,1.06e-08,315;UBERON:0002384,4.69e-07,371 | |||
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|short_description=p@chr10:64504029..64504040,- | |short_description=p@chr10:64504029..64504040,- | ||
}} | }} |
Latest revision as of 14:42, 23 July 2015
Short description: | p@chr10:64504029..64504040, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:64504029..64504040, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.52e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.52e-69 | 42 |
defensive cell | 3.24e-68 | 48 |
phagocyte | 3.24e-68 | 48 |
monopoietic cell | 3.04e-54 | 59 |
monocyte | 3.04e-54 | 59 |
monoblast | 3.04e-54 | 59 |
promonocyte | 3.04e-54 | 59 |
macrophage dendritic cell progenitor | 1.94e-52 | 61 |
myeloid lineage restricted progenitor cell | 2.12e-48 | 66 |
granulocyte monocyte progenitor cell | 1.16e-47 | 67 |
myeloid leukocyte | 2.79e-44 | 72 |
myeloid cell | 4.54e-29 | 108 |
common myeloid progenitor | 4.54e-29 | 108 |
nongranular leukocyte | 3.33e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 5.28e-26 | 120 |
leukocyte | 9.52e-23 | 136 |
hematopoietic oligopotent progenitor cell | 6.10e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-19 | 161 |
hematopoietic stem cell | 4.47e-18 | 168 |
hematopoietic cell | 4.61e-17 | 177 |
mesenchymal cell | 1.68e-07 | 354 |
connective tissue cell | 2.59e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.85e-42 | 76 |
bone element | 9.77e-39 | 82 |
skeletal element | 3.55e-35 | 90 |
immune system | 5.37e-34 | 93 |
hematopoietic system | 3.45e-32 | 98 |
blood island | 3.45e-32 | 98 |
skeletal system | 1.63e-31 | 100 |
hemolymphoid system | 4.54e-29 | 108 |
musculoskeletal system | 3.40e-18 | 167 |
lateral plate mesoderm | 1.24e-14 | 203 |
mesoderm | 1.06e-08 | 315 |
mesoderm-derived structure | 1.06e-08 | 315 |
presumptive mesoderm | 1.06e-08 | 315 |
connective tissue | 4.69e-07 | 371 |