FFCP PHASE1:Hg19::chr10:27815089..27815119,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:27815089..27815119,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr10:27815089..27815119,+ | |description=CAGE_peak_at_chr10:27815089..27815119,+ | ||
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|ontology_enrichment_celltype=CL:0002057!4.99e-25!42;CL:0000860!3.22e-23!45;CL:0002194!1.95e-18!63;CL:0000576!1.95e-18!63;CL:0000040!1.95e-18!63;CL:0000559!1.95e-18!63;CL:0002009!8.34e-18!65;CL:0000839!2.19e-16!70;CL:0000557!4.00e-16!71;CL:0000766!6.34e-15!76;CL:0000763!4.93e-11!112;CL:0000049!4.93e-11!112;CL:0000342!7.85e-09!1;CL:0002565!7.85e-09!1;CL:0002087!9.92e-09!119;CL:0000738!2.36e-08!140;CL:0002031!2.75e-08!124;CL:0000037!2.05e-07!172;CL:0000566!2.05e-07!172;CL:0000988!7.36e-07!182 | |ontology_enrichment_celltype=CL:0002057!4.99e-25!42;CL:0000860!3.22e-23!45;CL:0002194!1.95e-18!63;CL:0000576!1.95e-18!63;CL:0000040!1.95e-18!63;CL:0000559!1.95e-18!63;CL:0002009!8.34e-18!65;CL:0000839!2.19e-16!70;CL:0000557!4.00e-16!71;CL:0000766!6.34e-15!76;CL:0000763!4.93e-11!112;CL:0000049!4.93e-11!112;CL:0000342!7.85e-09!1;CL:0002565!7.85e-09!1;CL:0002087!9.92e-09!119;CL:0000738!2.36e-08!140;CL:0002031!2.75e-08!124;CL:0000037!2.05e-07!172;CL:0000566!2.05e-07!172;CL:0000988!7.36e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.48e-48;33!CL:0002057;3.48e-48;33!CL:0000473;5.58e-35;39!CL:0000234;5.58e-35;39!CL:0000576;2.03e-27;48!CL:0000766;1.17e-11;69!CL:0000763;5.63e-08;100 | |ontology_enrichment_celltype_v019=CL:0000860;3.48e-48;33!CL:0002057;3.48e-48;33!CL:0000473;5.58e-35;39!CL:0000234;5.58e-35;39!CL:0000576;2.03e-27;48!CL:0000766;1.17e-11;69!CL:0000763;5.63e-08;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.11e-42,42;CL:0002057,5.11e-42,42;CL:0000473,9.02e-37,48;CL:0000234,9.02e-37,48;CL:0002194,2.04e-29,59;CL:0000576,2.04e-29,59;CL:0000040,2.04e-29,59;CL:0000559,2.04e-29,59;CL:0002009,1.81e-28,61;CL:0000839,2.43e-26,66;CL:0000557,5.95e-26,67;CL:0000766,3.60e-24,72;CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0002087,3.68e-15,115;CL:0002031,1.59e-14,120;CL:0000738,8.37e-13,136;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.05e-32;42!CL:0000049;2.93e-07;108 | |ontology_enrichment_development_v019=CL:0002057;4.05e-32;42!CL:0000049;2.93e-07;108 | ||
|ontology_enrichment_disease=DOID:5662!8.49e-09!1 | |ontology_enrichment_disease=DOID:5662!8.49e-09!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!4.01e-15!86;UBERON:0004765!1.66e-14!101;UBERON:0001434!1.66e-14!101;UBERON:0002371!4.53e-14!80;UBERON:0002405!1.13e-10!115;UBERON:0002390!1.47e-10!102;UBERON:0003061!1.47e-10!102;UBERON:0002193!2.04e-09!112;UBERON:0005705!5.31e-09!1;UBERON:0008193!5.31e-09!1;UBERON:0002514!5.31e-09!1;UBERON:0003462!5.31e-09!1;UBERON:0008001!5.31e-09!1;UBERON:0007914!5.31e-09!1;UBERON:0003457!5.31e-09!1;UBERON:0009292!5.31e-09!1;UBERON:0007375!5.31e-09!1;UBERON:0003323!5.31e-09!1;UBERON:0002397!5.31e-09!1;UBERON:0001709!5.31e-09!1;UBERON:0004066!5.31e-09!1;UBERON:0002244!5.31e-09!1;UBERON:0005620!5.31e-09!1;UBERON:0004068!5.31e-09!1;UBERON:0004362!5.31e-09!1;UBERON:0002204!6.33e-09!167;UBERON:0002506!7.85e-09!1;UBERON:0001769!7.85e-09!1 | |ontology_enrichment_uberon=UBERON:0001474!4.01e-15!86;UBERON:0004765!1.66e-14!101;UBERON:0001434!1.66e-14!101;UBERON:0002371!4.53e-14!80;UBERON:0002405!1.13e-10!115;UBERON:0002390!1.47e-10!102;UBERON:0003061!1.47e-10!102;UBERON:0002193!2.04e-09!112;UBERON:0005705!5.31e-09!1;UBERON:0008193!5.31e-09!1;UBERON:0002514!5.31e-09!1;UBERON:0003462!5.31e-09!1;UBERON:0008001!5.31e-09!1;UBERON:0007914!5.31e-09!1;UBERON:0003457!5.31e-09!1;UBERON:0009292!5.31e-09!1;UBERON:0007375!5.31e-09!1;UBERON:0003323!5.31e-09!1;UBERON:0002397!5.31e-09!1;UBERON:0001709!5.31e-09!1;UBERON:0004066!5.31e-09!1;UBERON:0002244!5.31e-09!1;UBERON:0005620!5.31e-09!1;UBERON:0004068!5.31e-09!1;UBERON:0004362!5.31e-09!1;UBERON:0002204!6.33e-09!167;UBERON:0002506!7.85e-09!1;UBERON:0001769!7.85e-09!1 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.54e-23,76;UBERON:0001474,3.01e-21,82;UBERON:0004765,2.27e-19,90;UBERON:0002405,9.53e-19,93;UBERON:0002390,8.57e-18,98;UBERON:0003061,8.57e-18,98;UBERON:0001434,1.94e-17,100;UBERON:0002193,3.81e-16,108;UBERON:0002204,2.16e-10,167;UBERON:0003081,1.68e-08,203 | |||
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|short_description=p@chr10:27815089..27815119,+ | |short_description=p@chr10:27815089..27815119,+ | ||
}} | }} |
Latest revision as of 12:55, 23 July 2015
Short description: | p@chr10:27815089..27815119, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:27815089..27815119, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.11e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.11e-42 | 42 |
defensive cell | 9.02e-37 | 48 |
phagocyte | 9.02e-37 | 48 |
monopoietic cell | 2.04e-29 | 59 |
monocyte | 2.04e-29 | 59 |
monoblast | 2.04e-29 | 59 |
promonocyte | 2.04e-29 | 59 |
macrophage dendritic cell progenitor | 1.81e-28 | 61 |
myeloid lineage restricted progenitor cell | 2.43e-26 | 66 |
granulocyte monocyte progenitor cell | 5.95e-26 | 67 |
myeloid leukocyte | 3.60e-24 | 72 |
myeloid cell | 3.81e-16 | 108 |
common myeloid progenitor | 3.81e-16 | 108 |
nongranular leukocyte | 3.68e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.59e-14 | 120 |
leukocyte | 8.37e-13 | 136 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.54e-23 | 76 |
bone element | 3.01e-21 | 82 |
skeletal element | 2.27e-19 | 90 |
immune system | 9.53e-19 | 93 |
hematopoietic system | 8.57e-18 | 98 |
blood island | 8.57e-18 | 98 |
skeletal system | 1.94e-17 | 100 |
hemolymphoid system | 3.81e-16 | 108 |
musculoskeletal system | 2.16e-10 | 167 |
lateral plate mesoderm | 1.68e-08 | 203 |