FFCP PHASE1:Hg19::chr12:94853598..94853616,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51134 | |EntrezGene=51134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17966 | |HGNC=17966 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y592 | |UniProt=Q9Y592 | ||
|association_with_transcript=105bp_to_ENST00000339839_5end | |association_with_transcript=105bp_to_ENST00000339839_5end | ||
|cluster_id=chr12:94853598..94853616,- | |||
|description=CAGE_peak_4_at_CCDC41_5end | |description=CAGE_peak_4_at_CCDC41_5end | ||
|id=chr12:94853598..94853616,- | |id=chr12:94853598..94853616,- | ||
|ontology_enrichment_celltype=CL:0000037!1.42e-18!172;CL:0000566!1.42e-18!172;CL:0002032!2.29e-17!165;CL:0000837!2.29e-17!165;CL:0000988!9.59e-17!182;CL:0002031!2.53e-15!124;CL:0002087!4.51e-15!119;CL:0000738!1.16e-14!140;CL:0000763!2.80e-11!112;CL:0000049!2.80e-11!112;CL:0000557!4.49e-11!71;CL:0002009!9.60e-10!65;CL:0000860!1.12e-09!45;CL:0000839!4.09e-09!70;CL:0002057!4.37e-09!42;CL:0002194!8.43e-09!63;CL:0000576!8.43e-09!63;CL:0000040!8.43e-09!63;CL:0000559!8.43e-09!63;CL:0000766!3.02e-07!76 | |ontology_enrichment_celltype=CL:0000037!1.42e-18!172;CL:0000566!1.42e-18!172;CL:0002032!2.29e-17!165;CL:0000837!2.29e-17!165;CL:0000988!9.59e-17!182;CL:0002031!2.53e-15!124;CL:0002087!4.51e-15!119;CL:0000738!1.16e-14!140;CL:0000763!2.80e-11!112;CL:0000049!2.80e-11!112;CL:0000557!4.49e-11!71;CL:0002009!9.60e-10!65;CL:0000860!1.12e-09!45;CL:0000839!4.09e-09!70;CL:0002057!4.37e-09!42;CL:0002194!8.43e-09!63;CL:0000576!8.43e-09!63;CL:0000040!8.43e-09!63;CL:0000559!8.43e-09!63;CL:0000766!3.02e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.96e-09;33!CL:0002057;4.96e-09;33!CL:0000473;5.93e-07;39!CL:0000234;5.93e-07;39 | |ontology_enrichment_celltype_v019=CL:0000860;4.96e-09;33!CL:0002057;4.96e-09;33!CL:0000473;5.93e-07;39!CL:0000234;5.93e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.05e-18,168;CL:0000988,2.15e-17,177;CL:0002032,9.37e-17,161;CL:0000837,9.37e-17,161;CL:0002031,1.32e-14,120;CL:0002087,2.23e-14,115;CL:0000738,2.51e-14,136;CL:0000763,1.34e-10,108;CL:0000049,1.34e-10,108;CL:0000557,1.39e-10,67;CL:0000860,5.82e-09,42;CL:0002057,5.82e-09,42;CL:0002009,5.89e-09,61;CL:0000839,3.09e-08,66;CL:0000473,4.43e-08,48;CL:0000234,4.43e-08,48;CL:0002194,6.76e-08,59;CL:0000576,6.76e-08,59;CL:0000040,6.76e-08,59;CL:0000559,6.76e-08,59;CL:0000766,4.68e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;7.31e-07;42 | |ontology_enrichment_development_v019=CL:0002057;7.31e-07;42 | ||
|ontology_enrichment_disease=DOID:162!5.73e-11!235;DOID:14566!1.36e-10!239;DOID:2531!4.95e-09!51;DOID:0060083!4.95e-09!51;DOID:0050686!2.53e-08!137 | |ontology_enrichment_disease=DOID:162!5.73e-11!235;DOID:14566!1.36e-10!239;DOID:2531!4.95e-09!51;DOID:0060083!4.95e-09!51;DOID:0050686!2.53e-08!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,6.00e-09,51;DOID:0060083,6.00e-09,51;DOID:162,3.72e-08,235;DOID:14566,4.60e-08,239;DOID:0050686,4.55e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001474!4.67e-12!86;UBERON:0002371!6.26e-10!80;UBERON:0004765!2.57e-09!101;UBERON:0001434!2.57e-09!101;UBERON:0002390!7.84e-09!102;UBERON:0003061!7.84e-09!102 | |ontology_enrichment_uberon=UBERON:0001474!4.67e-12!86;UBERON:0002371!6.26e-10!80;UBERON:0004765!2.57e-09!101;UBERON:0001434!2.57e-09!101;UBERON:0002390!7.84e-09!102;UBERON:0003061!7.84e-09!102 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.74e-12,82;UBERON:0002390,2.09e-10,98;UBERON:0003061,2.09e-10,98;UBERON:0002371,5.69e-10,76;UBERON:0004765,1.12e-09,90;UBERON:0001434,2.63e-08,100;UBERON:0002405,4.38e-08,93;UBERON:0002193,1.08e-07,108 | |||
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| ||
|short_description=p4@CCDC41 | |short_description=p4@CCDC41 | ||
}} | }} |
Latest revision as of 01:26, 16 September 2015
Short description: | p4@CCDC41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCDC41_5end |
Coexpression cluster: | NA |
Association with transcript: | 105bp_to_ENST00000339839_5end |
EntrezGene: | CCDC41 |
HGNC: | 17966 |
UniProt: | Q9Y592 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.05e-18 | 168 |
hematopoietic cell | 2.15e-17 | 177 |
hematopoietic oligopotent progenitor cell | 9.37e-17 | 161 |
hematopoietic multipotent progenitor cell | 9.37e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 1.32e-14 | 120 |
nongranular leukocyte | 2.23e-14 | 115 |
leukocyte | 2.51e-14 | 136 |
myeloid cell | 1.34e-10 | 108 |
common myeloid progenitor | 1.34e-10 | 108 |
granulocyte monocyte progenitor cell | 1.39e-10 | 67 |
classical monocyte | 5.82e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.82e-09 | 42 |
macrophage dendritic cell progenitor | 5.89e-09 | 61 |
myeloid lineage restricted progenitor cell | 3.09e-08 | 66 |
defensive cell | 4.43e-08 | 48 |
phagocyte | 4.43e-08 | 48 |
monopoietic cell | 6.76e-08 | 59 |
monocyte | 6.76e-08 | 59 |
monoblast | 6.76e-08 | 59 |
promonocyte | 6.76e-08 | 59 |
myeloid leukocyte | 4.68e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.74e-12 | 82 |
hematopoietic system | 2.09e-10 | 98 |
blood island | 2.09e-10 | 98 |
bone marrow | 5.69e-10 | 76 |
skeletal element | 1.12e-09 | 90 |
skeletal system | 2.63e-08 | 100 |
immune system | 4.38e-08 | 93 |
hemolymphoid system | 1.08e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.00e-09 | 51 |
immune system cancer | 6.00e-09 | 51 |
cancer | 3.72e-08 | 235 |
disease of cellular proliferation | 4.60e-08 | 239 |
organ system cancer | 4.55e-07 | 137 |