FFCP PHASE1:Hg19::chr11:15145622..15145653,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:15145622..15145653,+ | |||
|description=CAGE_peak_at_chr11:15145622..15145653,+ | |description=CAGE_peak_at_chr11:15145622..15145653,+ | ||
|id=chr11:15145622..15145653,+ | |id=chr11:15145622..15145653,+ | ||
|ontology_enrichment_celltype=CL:0000057!3.10e-20!75;CL:0000055!9.76e-19!180;CL:0002551!4.13e-17!6;CL:0002620!2.76e-14!23;CL:0000515!1.53e-11!4;CL:0000188!7.72e-10!9;CL:0002552!9.25e-09!5;CL:0002166!1.75e-08!3;CL:0000594!9.36e-08!3;CL:0002554!6.49e-07!2;CL:0000680!8.06e-07!57;CL:0000056!8.06e-07!57;CL:0000355!8.06e-07!57 | |ontology_enrichment_celltype=CL:0000057!3.10e-20!75;CL:0000055!9.76e-19!180;CL:0002551!4.13e-17!6;CL:0002620!2.76e-14!23;CL:0000515!1.53e-11!4;CL:0000188!7.72e-10!9;CL:0002552!9.25e-09!5;CL:0002166!1.75e-08!3;CL:0000594!9.36e-08!3;CL:0002554!6.49e-07!2;CL:0000680!8.06e-07!57;CL:0000056!8.06e-07!57;CL:0000355!8.06e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002551;1.98e-21;6!CL:0002554;2.56e-16;2!CL:0002540;1.45e-12;6!CL:0002556;3.81e-12;6!CL:0000307;3.42e-11;3!CL:0000228;7.26e-09;1!CL:0002372;7.26e-09;1!CL:0000056;1.30e-08;4!CL:0002327;1.83e-08;4!CL:0002092;9.96e-08;10!CL:0000057;1.03e-07;73 | |ontology_enrichment_celltype_v019=CL:0002551;1.98e-21;6!CL:0002554;2.56e-16;2!CL:0002540;1.45e-12;6!CL:0002556;3.81e-12;6!CL:0000307;3.42e-11;3!CL:0000228;7.26e-09;1!CL:0002372;7.26e-09;1!CL:0000056;1.30e-08;4!CL:0002327;1.83e-08;4!CL:0002092;9.96e-08;10!CL:0000057;1.03e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0002551,2.38e-21,6;CL:0002554,2.03e-16,2;CL:0002540,1.51e-12,6;CL:0002556,4.27e-12,6;CL:0000068,3.99e-11,3;CL:0000069,3.99e-11,3;CL:0000307,3.99e-11,3;CL:0000377,3.99e-11,3;CL:0000057,2.05e-10,76;CL:0000228,7.27e-09,1;CL:0002372,7.27e-09,1;CL:0000515,1.35e-08,4;CL:0002327,1.64e-08,4;CL:0002092,1.02e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000377;3.42e-11;3!CL:0000515;1.30e-08;4 | |ontology_enrichment_development_v019=CL:0000377;3.42e-11;3!CL:0000515;1.30e-08;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.65e-16!83;UBERON:0002329!1.65e-16!83;UBERON:0003077!1.65e-16!83;UBERON:0003059!1.65e-16!83;UBERON:0007282!1.65e-16!83;UBERON:0009618!1.65e-16!83;UBERON:0007285!1.65e-16!83;UBERON:0003102!4.70e-12!95;UBERON:0004290!1.74e-11!70;UBERON:0002199!2.74e-11!45;UBERON:0002416!2.74e-11!45;UBERON:0002067!4.02e-11!9;UBERON:0004016!4.02e-11!9;UBERON:0010083!4.02e-11!9;UBERON:0000486!4.51e-10!82;UBERON:0005256!9.11e-10!143;UBERON:0002097!9.80e-10!40;UBERON:0003129!1.63e-08!11;UBERON:0000075!4.39e-07!13;UBERON:0005944!4.39e-07!13;UBERON:0004288!4.39e-07!13;UBERON:0003089!4.39e-07!13 | |ontology_enrichment_uberon=UBERON:0000914!1.65e-16!83;UBERON:0002329!1.65e-16!83;UBERON:0003077!1.65e-16!83;UBERON:0003059!1.65e-16!83;UBERON:0007282!1.65e-16!83;UBERON:0009618!1.65e-16!83;UBERON:0007285!1.65e-16!83;UBERON:0003102!4.70e-12!95;UBERON:0004290!1.74e-11!70;UBERON:0002199!2.74e-11!45;UBERON:0002416!2.74e-11!45;UBERON:0002067!4.02e-11!9;UBERON:0004016!4.02e-11!9;UBERON:0010083!4.02e-11!9;UBERON:0000486!4.51e-10!82;UBERON:0005256!9.11e-10!143;UBERON:0002097!9.80e-10!40;UBERON:0003129!1.63e-08!11;UBERON:0000075!4.39e-07!13;UBERON:0005944!4.39e-07!13;UBERON:0004288!4.39e-07!13;UBERON:0003089!4.39e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0002067;2.33e-14;9!UBERON:0001758;3.81e-12;6!UBERON:0003672;3.81e-12;6!UBERON:0003129;1.74e-10;7!UBERON:0001911;1.83e-08;4!UBERON:0002405;4.17e-07;27!UBERON:0011137;7.66e-07;11!UBERON:0010323;7.66e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0002067;2.33e-14;9!UBERON:0001758;3.81e-12;6!UBERON:0003672;3.81e-12;6!UBERON:0003129;1.74e-10;7!UBERON:0001911;1.83e-08;4!UBERON:0002405;4.17e-07;27!UBERON:0011137;7.66e-07;11!UBERON:0010323;7.66e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,2.63e-14,9;UBERON:0004016,2.63e-14,9;UBERON:0010083,2.63e-14,9;UBERON:0001758,4.27e-12,6;UBERON:0003672,4.27e-12,6;UBERON:0003129,1.92e-10,7;UBERON:0001911,1.64e-08,4;UBERON:0005333,1.64e-08,4;UBERON:0008425,1.64e-08,4;UBERON:0005311,1.64e-08,4;UBERON:0010323,8.14e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.468642863667593,0.624320153660641,1.1409436430889,0.597794722207204,8.57271840099484,8.7411389958791,5.89893388149444,1.83738754129404,0.491337269247072,0.413303124703062,0,0.247266929278557,1.82032272387605,2.15585442544872,1.0100166837244,1.50142223846357,6.37247465613621,0,0,0,0.113432183160021,0.538168907066586,0,0,0.300091096084402,0.103052529238439,0,0,0.675105328965065,0,0.252433774244115,0,0,0,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.283550194484773,1.43293636324557,1.45316969256981,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.672786506072164,0,0.22001485746285,0,0,1.690605505112,0,0,3.08648849114571,4.25547396069835,5.32844358032199,0,0,0,3.25736184293735,0,0,0,0,0,0,0,0,0,0,1.42636905040718,2.17171960001369,0.410952645100767,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,2.20538515975249,0.214840489736547,0.145016693914229,0.170453254832202,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.842516912477962,0,0,0,0,0,0,0,0.66343897524122,1.31535265576129,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,1.15466535270614,0,2.17781969722645,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.306806047506464,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.468642863667593,0.624320153660641,1.1409436430889,0.597794722207204,8.57271840099484,8.7411389958791,5.89893388149444,1.83738754129404,0.491337269247072,0.413303124703062,0,0.247266929278557,1.82032272387605,2.15585442544872,1.0100166837244,1.50142223846357,6.37247465613621,0,0,0,0.113432183160021,0.538168907066586,0,0,0.300091096084402,0.103052529238439,0,0,0.675105328965065,0,0.252433774244115,0,0,0,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.283550194484773,1.43293636324557,1.45316969256981,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.672786506072164,0,0.22001485746285,0,0,1.690605505112,0,0,3.08648849114571,4.25547396069835,5.32844358032199,0,0,0,3.25736184293735,0,0,0,0,0,0,0,0,0,0,1.42636905040718,2.17171960001369,0.410952645100767,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,2.20538515975249,0.214840489736547,0.145016693914229,0.170453254832202,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.842516912477962,0,0,0,0,0,0,0,0.66343897524122,1.31535265576129,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,1.15466535270614,0,2.17781969722645,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.306806047506464,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:15145622..15145653,+ | |short_description=p@chr11:15145622..15145653,+ | ||
}} | }} |
Latest revision as of 20:20, 23 July 2015
Short description: | p@chr11:15145622..15145653, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:15145622..15145653, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 2.38e-21 | 6 |
fibroblast of lymphatic vessel | 2.03e-16 | 2 |
mesenchymal stem cell of the bone marrow | 1.51e-12 | 6 |
fibroblast of periodontium | 4.27e-12 | 6 |
duct epithelial cell | 3.99e-11 | 3 |
branched duct epithelial cell | 3.99e-11 | 3 |
tracheal epithelial cell | 3.99e-11 | 3 |
tracheoblast | 3.99e-11 | 3 |
fibroblast | 2.05e-10 | 76 |
multinucleate cell | 7.27e-09 | 1 |
myotube | 7.27e-09 | 1 |
skeletal muscle myoblast | 1.35e-08 | 4 |
mammary gland epithelial cell | 1.64e-08 | 4 |
bone marrow cell | 1.02e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
dermis | 2.63e-14 | 9 |
dermatome | 2.63e-14 | 9 |
future dermis | 2.63e-14 | 9 |
periodontium | 4.27e-12 | 6 |
dentition | 4.27e-12 | 6 |
skull | 1.92e-10 | 7 |
mammary gland | 1.64e-08 | 4 |
mammary bud | 1.64e-08 | 4 |
mammary ridge | 1.64e-08 | 4 |
mammary placode | 1.64e-08 | 4 |
cranial skeletal system | 8.14e-07 | 11 |