FFCP PHASE1:Hg19::chr12:104682637..104682651,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7296 | |EntrezGene=7296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12437 | |HGNC=12437 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_uc001tku.2_5end | |association_with_transcript=-8bp_to_uc001tku.2_5end | ||
|cluster_id=chr12:104682637..104682651,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_4_at_TXNRD1_5end | |description=CAGE_peak_4_at_TXNRD1_5end | ||
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|ontology_enrichment_celltype=CL:0000766!3.27e-29!76;CL:0000763!3.28e-29!112;CL:0000049!3.28e-29!112;CL:0002057!1.40e-26!42;CL:0000860!4.29e-26!45;CL:0002009!8.99e-26!65;CL:0000037!1.17e-25!172;CL:0000566!1.17e-25!172;CL:0000557!1.19e-25!71;CL:0002194!1.03e-24!63;CL:0000576!1.03e-24!63;CL:0000040!1.03e-24!63;CL:0000559!1.03e-24!63;CL:0000839!1.53e-24!70;CL:0000738!1.86e-24!140;CL:0002032!4.98e-24!165;CL:0000837!4.98e-24!165;CL:0000988!7.26e-23!182;CL:0002031!6.20e-19!124;CL:0002087!2.08e-18!119;CL:0000063!3.54e-08!578;CL:0000077!2.28e-07!19;CL:0000134!2.74e-07!358 | |ontology_enrichment_celltype=CL:0000766!3.27e-29!76;CL:0000763!3.28e-29!112;CL:0000049!3.28e-29!112;CL:0002057!1.40e-26!42;CL:0000860!4.29e-26!45;CL:0002009!8.99e-26!65;CL:0000037!1.17e-25!172;CL:0000566!1.17e-25!172;CL:0000557!1.19e-25!71;CL:0002194!1.03e-24!63;CL:0000576!1.03e-24!63;CL:0000040!1.03e-24!63;CL:0000559!1.03e-24!63;CL:0000839!1.53e-24!70;CL:0000738!1.86e-24!140;CL:0002032!4.98e-24!165;CL:0000837!4.98e-24!165;CL:0000988!7.26e-23!182;CL:0002031!6.20e-19!124;CL:0002087!2.08e-18!119;CL:0000063!3.54e-08!578;CL:0000077!2.28e-07!19;CL:0000134!2.74e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-26;33!CL:0002057;1.41e-26;33!CL:0000576;5.66e-23;48!CL:0000473;1.65e-22;39!CL:0000234;1.65e-22;39!CL:0000766;1.26e-16;69!CL:0000763;5.57e-11;100!CL:0000094;1.96e-08;8!CL:0002087;1.05e-07;104!CL:0000077;1.34e-07;19!CL:0000738;4.42e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;1.41e-26;33!CL:0002057;1.41e-26;33!CL:0000576;5.66e-23;48!CL:0000473;1.65e-22;39!CL:0000234;1.65e-22;39!CL:0000766;1.26e-16;69!CL:0000763;5.57e-11;100!CL:0000094;1.96e-08;8!CL:0002087;1.05e-07;104!CL:0000077;1.34e-07;19!CL:0000738;4.42e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.14e-37,72;CL:0002009,1.64e-35,61;CL:0000860,2.62e-35,42;CL:0002057,2.62e-35,42;CL:0000763,3.69e-35,108;CL:0000049,3.69e-35,108;CL:0000473,8.93e-35,48;CL:0000234,8.93e-35,48;CL:0002194,4.56e-34,59;CL:0000576,4.56e-34,59;CL:0000040,4.56e-34,59;CL:0000559,4.56e-34,59;CL:0000557,1.35e-32,67;CL:0000839,4.28e-31,66;CL:0000037,6.61e-26,168;CL:0000738,1.55e-25,136;CL:0002032,2.82e-24,161;CL:0000837,2.82e-24,161;CL:0000988,1.29e-22,177;CL:0002087,6.77e-20,115;CL:0002031,3.51e-19,120;CL:0000094,2.34e-08,8;CL:0000077,5.45e-08,19;CL:0000134,6.60e-08,354;CL:0002393,1.16e-07,9;CL:0002397,1.16e-07,9;CL:0002320,4.38e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-25;42!CL:0000049;1.75e-10;108 | |ontology_enrichment_development_v019=CL:0002057;1.22e-25;42!CL:0000049;1.75e-10;108 | ||
|ontology_enrichment_disease=DOID:162!4.30e-12!235;DOID:14566!6.18e-12!239;DOID:305!6.98e-11!106;DOID:0050687!5.71e-09!143 | |ontology_enrichment_disease=DOID:162!4.30e-12!235;DOID:14566!6.18e-12!239;DOID:305!6.98e-11!106;DOID:0050687!5.71e-09!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,7.12e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.30e-22!102;UBERON:0003061!1.30e-22!102;UBERON:0002371!3.33e-21!80;UBERON:0002193!4.84e-21!112;UBERON:0001474!1.07e-18!86;UBERON:0002405!8.29e-14!115;UBERON:0004765!1.70e-12!101;UBERON:0001434!1.70e-12!101 | |ontology_enrichment_uberon=UBERON:0002390!1.30e-22!102;UBERON:0003061!1.30e-22!102;UBERON:0002371!3.33e-21!80;UBERON:0002193!4.84e-21!112;UBERON:0001474!1.07e-18!86;UBERON:0002405!8.29e-14!115;UBERON:0004765!1.70e-12!101;UBERON:0001434!1.70e-12!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.43e-28,76;UBERON:0002390,5.68e-28,98;UBERON:0003061,5.68e-28,98;UBERON:0002193,7.15e-26,108;UBERON:0001474,3.92e-24,82;UBERON:0002405,3.56e-22,93;UBERON:0004765,8.80e-20,90;UBERON:0001434,5.50e-16,100;UBERON:0003081,5.75e-11,203 | |||
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| ||
|short_description=p4@TXNRD1 | |short_description=p4@TXNRD1 | ||
}} | }} |
Latest revision as of 23:59, 15 September 2015
Short description: | p4@TXNRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TXNRD1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -8bp_to_uc001tku.2_5end |
EntrezGene: | TXNRD1 |
HGNC: | 12437 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.14e-37 | 72 |
macrophage dendritic cell progenitor | 1.64e-35 | 61 |
classical monocyte | 2.62e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.62e-35 | 42 |
myeloid cell | 3.69e-35 | 108 |
common myeloid progenitor | 3.69e-35 | 108 |
defensive cell | 8.93e-35 | 48 |
phagocyte | 8.93e-35 | 48 |
monopoietic cell | 4.56e-34 | 59 |
monocyte | 4.56e-34 | 59 |
monoblast | 4.56e-34 | 59 |
promonocyte | 4.56e-34 | 59 |
granulocyte monocyte progenitor cell | 1.35e-32 | 67 |
myeloid lineage restricted progenitor cell | 4.28e-31 | 66 |
hematopoietic stem cell | 6.61e-26 | 168 |
leukocyte | 1.55e-25 | 136 |
hematopoietic oligopotent progenitor cell | 2.82e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.82e-24 | 161 |
hematopoietic cell | 1.29e-22 | 177 |
nongranular leukocyte | 6.77e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 3.51e-19 | 120 |
granulocyte | 2.34e-08 | 8 |
mesothelial cell | 5.45e-08 | 19 |
mesenchymal cell | 6.60e-08 | 354 |
intermediate monocyte | 1.16e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.16e-07 | 9 |
connective tissue cell | 4.38e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.43e-28 | 76 |
hematopoietic system | 5.68e-28 | 98 |
blood island | 5.68e-28 | 98 |
hemolymphoid system | 7.15e-26 | 108 |
bone element | 3.92e-24 | 82 |
immune system | 3.56e-22 | 93 |
skeletal element | 8.80e-20 | 90 |
skeletal system | 5.50e-16 | 100 |
lateral plate mesoderm | 5.75e-11 | 203 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.12e-08 | 106 |