FFCP PHASE1:Hg19::chr15:42875413..42875427,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:42875413..42875427,+ | |||
|coexpression_cluster_id=C48 | |coexpression_cluster_id=C48 | ||
|description=CAGE_peak_at_chr15:42875413..42875427,+ | |description=CAGE_peak_at_chr15:42875413..42875427,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.49e-14;1!UBERON:0010227;1.33e-13;1!UBERON:0006242;1.33e-13;1!UBERON:0004874;1.33e-13;1 | |ontology_enrichment_development_v019=UBERON:0004140;5.49e-14;1!UBERON:0010227;1.33e-13;1!UBERON:0006242;1.33e-13;1!UBERON:0004874;1.33e-13;1 | ||
|ontology_enrichment_disease=DOID:1287!8.43e-08!4;DOID:114!1.50e-07!2 | |ontology_enrichment_disease=DOID:1287!8.43e-08!4;DOID:114!1.50e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005409;4.03e-19;22!UBERON:0000059;3.27e-18;11!UBERON:0000160;3.58e-17;17!UBERON:0001000;3.50e-14;1!UBERON:0005352;3.50e-14;1!UBERON:0002146;5.49e-14;1!UBERON:0005623;5.49e-14;1!UBERON:0002079;1.33e-13;1!UBERON:0006834;1.33e-13;1!UBERON:0000989;1.33e-13;1!UBERON:0008811;1.33e-13;1!UBERON:0001155;7.37e-13;9!UBERON:0004921;4.99e-12;33!UBERON:0002081;1.93e-07;2!UBERON:0000922;2.88e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0005409;4.03e-19;22!UBERON:0000059;3.27e-18;11!UBERON:0000160;3.58e-17;17!UBERON:0001000;3.50e-14;1!UBERON:0005352;3.50e-14;1!UBERON:0002146;5.49e-14;1!UBERON:0005623;5.49e-14;1!UBERON:0002079;1.33e-13;1!UBERON:0006834;1.33e-13;1!UBERON:0000989;1.33e-13;1!UBERON:0008811;1.33e-13;1!UBERON:0001155;7.37e-13;9!UBERON:0004921;4.99e-12;33!UBERON:0002081;1.93e-07;2!UBERON:0000922;2.88e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,2.50e-18,11;UBERON:0000160,3.18e-17,17;UBERON:0005409,6.55e-17,25;UBERON:0001000,3.50e-14,1;UBERON:0005352,3.50e-14,1;UBERON:0002146,5.85e-14,1;UBERON:0005623,5.85e-14,1;UBERON:0000989,1.25e-13,1;UBERON:0008811,1.25e-13,1;UBERON:0006258,1.25e-13,1;UBERON:0005876,1.25e-13,1;UBERON:0004874,1.25e-13,1;UBERON:0002079,1.42e-13,1;UBERON:0006834,1.83e-13,1;UBERON:0001155,6.13e-13,9;UBERON:0007023,1.19e-09,114;UBERON:0002081,1.99e-07,2;UBERON:0010227,1.99e-07,2 | |||
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| ||
|short_description=p@chr15:42875413..42875427,+ | |short_description=p@chr15:42875413..42875427,+ | ||
}} | }} |
Latest revision as of 01:43, 25 July 2015
Short description: | p@chr15:42875413..42875427, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:42875413..42875427, + |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
large intestine | 2.50e-18 | 11 |
intestine | 3.18e-17 | 17 |
gastrointestinal system | 6.55e-17 | 25 |
vas deferens | 3.50e-14 | 1 |
spermatic cord | 3.50e-14 | 1 |
pulmonary valve | 5.85e-14 | 1 |
semi-lunar valve | 5.85e-14 | 1 |
penis | 1.25e-13 | 1 |
intromittent organ | 1.25e-13 | 1 |
lateral plate mesenchyme | 1.25e-13 | 1 |
undifferentiated genital tubercle | 1.25e-13 | 1 |
somatopleure | 1.25e-13 | 1 |
left cardiac atrium | 1.42e-13 | 1 |
uterus or analog | 1.83e-13 | 1 |
colon | 6.13e-13 | 9 |
adult organism | 1.19e-09 | 114 |
cardiac atrium | 1.99e-07 | 2 |
future cardiac atrium | 1.99e-07 | 2 |