FFCP PHASE1:Hg19::chr5:133473802..133473833,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:133473802..133473833,- | |||
|coexpression_cluster_id=C1952 | |coexpression_cluster_id=C1952 | ||
|description=CAGE_peak_at_chr5:133473802..133473833,- | |description=CAGE_peak_at_chr5:133473802..133473833,- | ||
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|ontology_enrichment_celltype=CL:0000791!2.37e-11!18;CL:0000789!2.37e-11!18;CL:0002420!2.37e-11!18;CL:0002419!2.37e-11!18;CL:0000790!2.37e-11!18;CL:0000084!3.82e-11!25;CL:0000827!3.82e-11!25;CL:0000838!2.22e-09!52;CL:0000542!4.78e-09!53;CL:0000051!4.78e-09!53;CL:0000625!1.98e-08!11 | |ontology_enrichment_celltype=CL:0000791!2.37e-11!18;CL:0000789!2.37e-11!18;CL:0002420!2.37e-11!18;CL:0002419!2.37e-11!18;CL:0000790!2.37e-11!18;CL:0000084!3.82e-11!25;CL:0000827!3.82e-11!25;CL:0000838!2.22e-09!52;CL:0000542!4.78e-09!53;CL:0000051!4.78e-09!53;CL:0000625!1.98e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;5.49e-22;25!CL:0000791;6.36e-21;18!CL:0000789;6.36e-21;18!CL:0002419;6.36e-21;18!CL:0000226;1.04e-15;3!CL:0000842;1.04e-15;3!CL:0000625;1.30e-15;11!CL:0000623;3.87e-15;3!CL:0000542;4.33e-10;53!CL:0000624;2.88e-08;6 | |ontology_enrichment_celltype_v019=CL:0000084;5.49e-22;25!CL:0000791;6.36e-21;18!CL:0000789;6.36e-21;18!CL:0002419;6.36e-21;18!CL:0000226;1.04e-15;3!CL:0000842;1.04e-15;3!CL:0000625;1.30e-15;11!CL:0000623;3.87e-15;3!CL:0000542;4.33e-10;53!CL:0000624;2.88e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.70e-22,25;CL:0000827,3.70e-22,25;CL:0000791,3.62e-21,18;CL:0000789,3.62e-21,18;CL:0002420,3.62e-21,18;CL:0002419,3.62e-21,18;CL:0000790,3.62e-21,18;CL:0000838,9.49e-21,52;CL:0000542,2.73e-20,53;CL:0000051,2.73e-20,53;CL:0000625,7.41e-16,11;CL:0000226,9.47e-16,3;CL:0000842,9.47e-16,3;CL:0000623,4.17e-15,3;CL:0000825,4.17e-15,3;CL:0000738,2.98e-11,136;CL:0002087,4.24e-11,115;CL:0000624,2.75e-08,6;CL:0000037,2.96e-08,168;CL:0000988,1.30e-07,177;CL:0002031,5.87e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;6.36e-21;18!CL:0000051;4.33e-10;53 | |ontology_enrichment_development_v019=CL:0000790;6.36e-21;18!CL:0000051;4.33e-10;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.86e-07!15;UBERON:0000179!2.86e-07!15;UBERON:0000463!2.86e-07!15 | |ontology_enrichment_uberon=UBERON:0000178!2.86e-07!15;UBERON:0000179!2.86e-07!15;UBERON:0000463!2.86e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.36e-25;15!UBERON:0000179;4.36e-25;15!UBERON:0000463;4.36e-25;15!UBERON:0002390;1.91e-15;32!UBERON:0002370;9.72e-12;2!UBERON:0005058;9.72e-12;2!UBERON:0009113;9.72e-12;2!UBERON:0002193;5.16e-11;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.36e-25;15!UBERON:0000179;4.36e-25;15!UBERON:0000463;4.36e-25;15!UBERON:0002390;1.91e-15;32!UBERON:0002370;9.72e-12;2!UBERON:0005058;9.72e-12;2!UBERON:0009113;9.72e-12;2!UBERON:0002193;5.16e-11;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.69e-25,15;UBERON:0000179,3.69e-25,15;UBERON:0000463,3.69e-25,15 | |||
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| ||
|short_description=p@chr5:133473802..133473833,- | |short_description=p@chr5:133473802..133473833,- | ||
}} | }} |
Latest revision as of 09:46, 30 July 2015
Short description: | p@chr5:133473802..133473833, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:133473802..133473833, - |
Coexpression cluster: | C1952_thymus_Hodgkin_acute_CD8_CD4_Whole_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 3.70e-22 | 25 |
pro-T cell | 3.70e-22 | 25 |
mature alpha-beta T cell | 3.62e-21 | 18 |
alpha-beta T cell | 3.62e-21 | 18 |
immature T cell | 3.62e-21 | 18 |
mature T cell | 3.62e-21 | 18 |
immature alpha-beta T cell | 3.62e-21 | 18 |
lymphoid lineage restricted progenitor cell | 9.49e-21 | 52 |
lymphocyte | 2.73e-20 | 53 |
common lymphoid progenitor | 2.73e-20 | 53 |
CD8-positive, alpha-beta T cell | 7.41e-16 | 11 |
single nucleate cell | 9.47e-16 | 3 |
mononuclear cell | 9.47e-16 | 3 |
natural killer cell | 4.17e-15 | 3 |
pro-NK cell | 4.17e-15 | 3 |
leukocyte | 2.98e-11 | 136 |
nongranular leukocyte | 4.24e-11 | 115 |
CD4-positive, alpha-beta T cell | 2.75e-08 | 6 |
hematopoietic stem cell | 2.96e-08 | 168 |
hematopoietic cell | 1.30e-07 | 177 |
hematopoietic lineage restricted progenitor cell | 5.87e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 3.69e-25 | 15 |
haemolymphatic fluid | 3.69e-25 | 15 |
organism substance | 3.69e-25 | 15 |