FFCP PHASE1:Hg19::chr1:8021713..8021788,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11315 | |EntrezGene=11315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16369 | |HGNC=16369 | ||
|TSSclassifier=strong | |||
|UniProt=Q99497 | |UniProt=Q99497 | ||
|association_with_transcript=0bp_to_ENST00000338639,ENST00000377493,ENST00000460192,ENST00000493678,NM_001123377,NM_007262,uc001aou.3,uc001aov.3,uc001aow.3,uc001aox.3_5end | |association_with_transcript=0bp_to_ENST00000338639,ENST00000377493,ENST00000460192,ENST00000493678,NM_001123377,NM_007262,uc001aou.3,uc001aov.3,uc001aow.3,uc001aox.3_5end | ||
|cluster_id=chr1:8021713..8021788,+ | |||
|description=CAGE_peak_1_at_PARK7_5end | |description=CAGE_peak_1_at_PARK7_5end | ||
|id=chr1:8021713..8021788,+ | |id=chr1:8021713..8021788,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.39e-16!180;CL:0000393!1.13e-14!60;CL:0000211!1.13e-14!60;CL:0000680!9.99e-14!57;CL:0000056!9.99e-14!57;CL:0000355!9.99e-14!57;CL:0000187!7.29e-13!54;CL:0000359!3.58e-10!32;CL:0000183!6.12e-10!59;CL:0000192!6.91e-10!42;CL:0000514!6.91e-10!42 | |ontology_enrichment_celltype=CL:0000055!2.39e-16!180;CL:0000393!1.13e-14!60;CL:0000211!1.13e-14!60;CL:0000680!9.99e-14!57;CL:0000056!9.99e-14!57;CL:0000355!9.99e-14!57;CL:0000187!7.29e-13!54;CL:0000359!3.58e-10!32;CL:0000183!6.12e-10!59;CL:0000192!6.91e-10!42;CL:0000514!6.91e-10!42 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.86e-09;32!CL:0000393;8.28e-08;61!CL:0000211;8.28e-08;61!CL:0000187;2.33e-07;55 | |ontology_enrichment_celltype_v019=CL:0000359;1.86e-09;32!CL:0000393;8.28e-08;61!CL:0000211;8.28e-08;61!CL:0000187;2.33e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.86e-14,61;CL:0000211,3.86e-14,61;CL:0000680,3.34e-13,58;CL:0000056,3.34e-13,58;CL:0000355,3.34e-13,58;CL:0000187,2.39e-12,55;CL:0000359,3.58e-10,32;CL:0000192,2.17e-09,43;CL:0000514,2.17e-09,43 | |||
|ontology_enrichment_development_v019=CL:0000355;4.62e-07;58 | |ontology_enrichment_development_v019=CL:0000355;4.62e-07;58 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.73e-20!83;UBERON:0002329!7.73e-20!83;UBERON:0003077!7.73e-20!83;UBERON:0003059!7.73e-20!83;UBERON:0007282!7.73e-20!83;UBERON:0009618!7.73e-20!83;UBERON:0007285!7.73e-20!83;UBERON:0004290!3.71e-17!70;UBERON:0001134!1.37e-14!61;UBERON:0002036!1.37e-14!61;UBERON:0003082!1.37e-14!61;UBERON:0002385!1.23e-13!63;UBERON:0001015!1.23e-13!63;UBERON:0000383!1.23e-13!63;UBERON:0000486!3.47e-13!82;UBERON:0005256!5.72e-09!143;UBERON:0000490!7.17e-09!138;UBERON:0004872!1.66e-07!84;UBERON:0001737!1.74e-07!9;UBERON:0000481!5.05e-07!347 | |ontology_enrichment_uberon=UBERON:0000914!7.73e-20!83;UBERON:0002329!7.73e-20!83;UBERON:0003077!7.73e-20!83;UBERON:0003059!7.73e-20!83;UBERON:0007282!7.73e-20!83;UBERON:0009618!7.73e-20!83;UBERON:0007285!7.73e-20!83;UBERON:0004290!3.71e-17!70;UBERON:0001134!1.37e-14!61;UBERON:0002036!1.37e-14!61;UBERON:0003082!1.37e-14!61;UBERON:0002385!1.23e-13!63;UBERON:0001015!1.23e-13!63;UBERON:0000383!1.23e-13!63;UBERON:0000486!3.47e-13!82;UBERON:0005256!5.72e-09!143;UBERON:0000490!7.17e-09!138;UBERON:0004872!1.66e-07!84;UBERON:0001737!1.74e-07!9;UBERON:0000481!5.05e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;6.11e-08;31!UBERON:0001015;6.11e-08;31!UBERON:0000383;6.11e-08;31!UBERON:0001737;1.75e-07;9!UBERON:0001557;1.75e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002385;6.11e-08;31!UBERON:0001015;6.11e-08;31!UBERON:0000383;6.11e-08;31!UBERON:0001737;1.75e-07;9!UBERON:0001557;1.75e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.01e-17,73;UBERON:0003077,9.69e-17,72;UBERON:0007285,9.69e-17,72;UBERON:0002329,1.29e-16,71;UBERON:0003059,1.29e-16,71;UBERON:0007282,1.29e-16,71;UBERON:0004290,1.29e-16,71;UBERON:0009618,1.29e-16,71;UBERON:0001134,4.59e-14,62;UBERON:0002036,4.59e-14,62;UBERON:0003082,4.59e-14,62;UBERON:0007503,3.26e-13,78;UBERON:0002385,3.77e-13,64;UBERON:0001015,3.77e-13,64;UBERON:0000383,3.77e-13,64;UBERON:0000486,8.72e-13,83;UBERON:0000490,1.41e-10,148;UBERON:0005256,3.80e-08,122;UBERON:0004872,9.05e-08,83;UBERON:0001737,1.74e-07,9 | |||
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| ||
|short_description=p1@PARK7 | |short_description=p1@PARK7 | ||
}} | }} |
Latest revision as of 09:09, 19 September 2015
Short description: | p1@PARK7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PARK7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000338639, ENST00000377493, ENST00000460192, ENST00000493678, NM_001123377, NM_007262, uc001aou.3, uc001aov.3, uc001aow.3, uc001aox.3_5end |
EntrezGene: | PARK7 |
HGNC: | 16369 |
UniProt: | Q99497 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.86e-14 | 61 |
electrically active cell | 3.86e-14 | 61 |
muscle precursor cell | 3.34e-13 | 58 |
myoblast | 3.34e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.34e-13 | 58 |
muscle cell | 2.39e-12 | 55 |
vascular associated smooth muscle cell | 3.58e-10 | 32 |
smooth muscle cell | 2.17e-09 | 43 |
smooth muscle myoblast | 2.17e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 4.01e-17 | 73 |
paraxial mesoderm | 9.69e-17 | 72 |
presumptive paraxial mesoderm | 9.69e-17 | 72 |
somite | 1.29e-16 | 71 |
presomitic mesoderm | 1.29e-16 | 71 |
presumptive segmental plate | 1.29e-16 | 71 |
dermomyotome | 1.29e-16 | 71 |
trunk paraxial mesoderm | 1.29e-16 | 71 |
skeletal muscle tissue | 4.59e-14 | 62 |
striated muscle tissue | 4.59e-14 | 62 |
myotome | 4.59e-14 | 62 |
epithelial vesicle | 3.26e-13 | 78 |
muscle tissue | 3.77e-13 | 64 |
musculature | 3.77e-13 | 64 |
musculature of body | 3.77e-13 | 64 |
multilaminar epithelium | 8.72e-13 | 83 |
unilaminar epithelium | 1.41e-10 | 148 |
trunk mesenchyme | 3.80e-08 | 122 |
splanchnic layer of lateral plate mesoderm | 9.05e-08 | 83 |
larynx | 1.74e-07 | 9 |