FFCP PHASE1:Hg19::chr7:20197239..20197244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:20197239..20197244,- | |||
|description=CAGE_peak_at_chr7:20197239..20197244,- | |description=CAGE_peak_at_chr7:20197239..20197244,- | ||
|id=chr7:20197239..20197244,- | |id=chr7:20197239..20197244,- | ||
|ontology_enrichment_celltype=CL:0000945!1.99e-07!24;CL:0000826!1.99e-07!24;CL:0002076!3.08e-07!43 | |ontology_enrichment_celltype=CL:0000945!1.99e-07!24;CL:0000826!1.99e-07!24;CL:0002076!3.08e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000322;8.38e-07;3!CL:0000945;8.68e-07;24 | |ontology_enrichment_celltype_v019=CL:0000322;8.38e-07;3!CL:0000945;8.68e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.46e-07,24;CL:0000826,7.46e-07,24;CL:0000322,8.62e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!3.32e-09!14;DOID:305!1.69e-08!106;DOID:162!1.99e-08!235;DOID:0050686!3.76e-08!137;DOID:14566!5.17e-08!239 | |ontology_enrichment_disease=DOID:1749!3.32e-09!14;DOID:305!1.69e-08!106;DOID:162!1.99e-08!235;DOID:0050686!3.76e-08!137;DOID:14566!5.17e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:3910;1.38e-09;2!DOID:4468;1.38e-09;2!DOID:4929;1.38e-09;2 | |ontology_enrichment_disease_v019=DOID:3910;1.38e-09;2!DOID:4468;1.38e-09;2!DOID:4929;1.38e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4929,1.22e-09,2;DOID:3910,1.44e-09,2;DOID:4468,1.86e-09,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002114;6.43e-23;2!UBERON:0002171;8.01e-18;1!UBERON:0004913;8.01e-18;1!UBERON:0003703;8.01e-18;1!UBERON:0006518;8.01e-18;1!UBERON:0008949;8.01e-18;1!UBERON:0000101;8.01e-18;1!UBERON:0002167;8.01e-18;1!UBERON:0001174;8.01e-18;1!UBERON:0004914;8.01e-18;1!UBERON:0002108;3.59e-14;4!UBERON:0004903;1.38e-09;2!UBERON:0002173;1.38e-09;2!UBERON:0002186;1.38e-09;2!UBERON:0000058;1.52e-07;10!UBERON:0005409;4.63e-07;22!UBERON:0004821;8.38e-07;3!UBERON:0007499;8.38e-07;3!UBERON:0003215;8.38e-07;3!UBERON:0010368;8.38e-07;3!UBERON:0009911;8.38e-07;3!UBERON:0002299;8.38e-07;3!UBERON:0006524;8.38e-07;3!UBERON:0008874;8.38e-07;3!UBERON:0002169;8.38e-07;3!UBERON:0004894;8.38e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002114;6.43e-23;2!UBERON:0002171;8.01e-18;1!UBERON:0004913;8.01e-18;1!UBERON:0003703;8.01e-18;1!UBERON:0006518;8.01e-18;1!UBERON:0008949;8.01e-18;1!UBERON:0000101;8.01e-18;1!UBERON:0002167;8.01e-18;1!UBERON:0001174;8.01e-18;1!UBERON:0004914;8.01e-18;1!UBERON:0002108;3.59e-14;4!UBERON:0004903;1.38e-09;2!UBERON:0002173;1.38e-09;2!UBERON:0002186;1.38e-09;2!UBERON:0000058;1.52e-07;10!UBERON:0005409;4.63e-07;22!UBERON:0004821;8.38e-07;3!UBERON:0007499;8.38e-07;3!UBERON:0003215;8.38e-07;3!UBERON:0010368;8.38e-07;3!UBERON:0009911;8.38e-07;3!UBERON:0002299;8.38e-07;3!UBERON:0006524;8.38e-07;3!UBERON:0008874;8.38e-07;3!UBERON:0002169;8.38e-07;3!UBERON:0004894;8.38e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,8.99e-23,2;UBERON:0004913,6.23e-18,1;UBERON:0003703,6.23e-18,1;UBERON:0001174,6.23e-18,1;UBERON:0004914,6.23e-18,1;UBERON:0002171,1.22e-17,1;UBERON:0006518,1.22e-17,1;UBERON:0008949,1.22e-17,1;UBERON:0000101,1.22e-17,1;UBERON:0002167,1.22e-17,1;UBERON:0002108,4.39e-14,4;UBERON:0004903,1.44e-09,2;UBERON:0002173,1.44e-09,2;UBERON:0002186,1.44e-09,2;UBERON:0004821,8.62e-07,3;UBERON:0003215,8.62e-07,3;UBERON:0010368,8.62e-07,3;UBERON:0009911,8.62e-07,3;UBERON:0002299,8.62e-07,3;UBERON:0006524,8.62e-07,3;UBERON:0008874,8.62e-07,3;UBERON:0002169,8.62e-07,3;UBERON:0004894,8.62e-07,3 | |||
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| ||
|short_description=p@chr7:20197239..20197244,- | |short_description=p@chr7:20197239..20197244,- | ||
}} | }} |
Latest revision as of 08:20, 31 July 2015
Short description: | p@chr7:20197239..20197244, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:20197239..20197244, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.46e-07 | 24 |
pro-B cell | 7.46e-07 | 24 |
pneumocyte | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
duodenum | 8.99e-23 | 2 |
hepatopancreatic ampulla | 6.23e-18 | 1 |
extrahepatic bile duct | 6.23e-18 | 1 |
common bile duct | 6.23e-18 | 1 |
duodenal papilla | 6.23e-18 | 1 |
lower lobe of right lung | 1.22e-17 | 1 |
right lung lobe | 1.22e-17 | 1 |
lower lobe of lung | 1.22e-17 | 1 |
lobe of lung | 1.22e-17 | 1 |
right lung | 1.22e-17 | 1 |
small intestine | 4.39e-14 | 4 |
bronchoalveolar duct junction | 1.44e-09 | 2 |
alveolar duct | 1.44e-09 | 2 |
bronchiole | 1.44e-09 | 2 |
pulmonary alveolus epithelium | 8.62e-07 | 3 |
alveolus | 8.62e-07 | 3 |
pulmonary lobule | 8.62e-07 | 3 |
lobule | 8.62e-07 | 3 |
alveolus of lung | 8.62e-07 | 3 |
alveolar system | 8.62e-07 | 3 |
pulmonary acinus | 8.62e-07 | 3 |
alveolar sac | 8.62e-07 | 3 |
alveolar wall | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.22e-09 | 2 |
lung adenocarcinoma | 1.44e-09 | 2 |
clear cell adenocarcinoma | 1.86e-09 | 2 |