FFCP PHASE1:Hg19::chr10:32342346..32342350,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:32342346..32342350,- | |||
|description=CAGE_peak_at_chr10:32342346..32342350,- | |description=CAGE_peak_at_chr10:32342346..32342350,- | ||
|id=chr10:32342346..32342350,- | |id=chr10:32342346..32342350,- | ||
|ontology_enrichment_celltype=CL:0002087!1.28e-13!119;CL:0000738!4.14e-13!140;CL:0002031!2.20e-12!124;CL:0000037!3.87e-11!172;CL:0000566!3.87e-11!172;CL:0000988!2.22e-10!182;CL:0002032!3.79e-10!165;CL:0000837!3.79e-10!165;CL:0000860!4.81e-10!45;CL:0002057!1.31e-09!42;CL:0002009!1.63e-09!65;CL:0000557!3.33e-09!71;CL:0002194!6.87e-09!63;CL:0000576!6.87e-09!63;CL:0000040!6.87e-09!63;CL:0000559!6.87e-09!63;CL:0000766!2.46e-08!76;CL:0000839!2.96e-08!70 | |ontology_enrichment_celltype=CL:0002087!1.28e-13!119;CL:0000738!4.14e-13!140;CL:0002031!2.20e-12!124;CL:0000037!3.87e-11!172;CL:0000566!3.87e-11!172;CL:0000988!2.22e-10!182;CL:0002032!3.79e-10!165;CL:0000837!3.79e-10!165;CL:0000860!4.81e-10!45;CL:0002057!1.31e-09!42;CL:0002009!1.63e-09!65;CL:0000557!3.33e-09!71;CL:0002194!6.87e-09!63;CL:0000576!6.87e-09!63;CL:0000040!6.87e-09!63;CL:0000559!6.87e-09!63;CL:0000766!2.46e-08!76;CL:0000839!2.96e-08!70 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.80e-16;6!CL:0000623;3.21e-15;3!CL:0000511;2.77e-12;1!CL:0002625;2.77e-12;1!CL:0000216;2.77e-12;1!CL:0000791;1.29e-09;18!CL:0000789;1.29e-09;18!CL:0002419;1.29e-09;18!CL:0000084;5.72e-07;25 | |ontology_enrichment_celltype_v019=CL:0000624;1.80e-16;6!CL:0000623;3.21e-15;3!CL:0000511;2.77e-12;1!CL:0002625;2.77e-12;1!CL:0000216;2.77e-12;1!CL:0000791;1.29e-09;18!CL:0000789;1.29e-09;18!CL:0002419;1.29e-09;18!CL:0000084;5.72e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.54e-16,6;CL:0000623,4.94e-15,3;CL:0000825,4.94e-15,3;CL:0000511,2.63e-12,1;CL:0002625,2.63e-12,1;CL:0000216,2.63e-12,1;CL:0000791,1.06e-09,18;CL:0000789,1.06e-09,18;CL:0002420,1.06e-09,18;CL:0002419,1.06e-09,18;CL:0000790,1.06e-09,18;CL:0000738,1.17e-07,136;CL:0000084,5.00e-07,25;CL:0000827,5.00e-07,25;CL:0000838,6.07e-07,52;CL:0000542,8.36e-07,53;CL:0000051,8.36e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.29e-09;18 | |ontology_enrichment_development_v019=CL:0000790;1.29e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.91e-08!102;UBERON:0003061!7.91e-08!102;UBERON:0002371!6.92e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!7.91e-08!102;UBERON:0003061!7.91e-08!102;UBERON:0002371!6.92e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.77e-12;1!UBERON:0001343;2.77e-12;1!UBERON:0004910;2.77e-12;1!UBERON:0004813;2.77e-12;1!UBERON:0004909;9.17e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001136;2.77e-12;1!UBERON:0001343;2.77e-12;1!UBERON:0004910;2.77e-12;1!UBERON:0004813;2.77e-12;1!UBERON:0004909;9.17e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.63e-12,1;UBERON:0001343,2.63e-12,1;UBERON:0004910,2.63e-12,1;UBERON:0005154,2.63e-12,1;UBERON:0005295,2.63e-12,1;UBERON:0004813,2.63e-12,1;UBERON:0005297,2.63e-12,1;UBERON:0005294,2.63e-12,1;UBERON:0010141,2.63e-12,1;UBERON:0005891,2.63e-12,1;UBERON:0004909,8.93e-07,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684372125364421,0.125542639594803,0.229240217243854,0.410502947249729,0.314843125254717,0,0.383829398097213,0,0,0,0,0.232401601740905,0.284338464974843,0.293600439334847,1.10799081706375,0.401088894940283,0.217010870715852,0,0.32389366601898,0,1.01778767145695,0,0.727752183563449,0.464858073811369,0.822335776043652,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0,0,0.941211697713023,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0.989553900560148,0.398927315243264,0.426224750532694,0.870627715885752,0.56738522469114,0.622822248995575,1.00499466102697,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0.422510572623884,0,0.419317291016752,0.112328631146495,0,0.48217676009124,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0.889509253863555,0,0.400395987036012,0,0,0.954053754535364,0.569212969109448,0.587237189370939,0.382273228125229,1.32171328579026,0,0,1.96709770113833,2.75107533924415,1.02800749499755,0,0,0,0,0.445641827540694,0.294605907474837,0.443067789167242,0.541607727530031,0.640456598628376,0.520237390239513,0.822189523018381,0.276350017785848,0.289803085735052,0.296573126324121,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.604820229674197,1.87208137048455,0.724122019413995,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0.174129737299267,0.398873881556595,0.953962497221368,1.14398982156026,0,0,0,0,0,0,0,0,0.775250277507987,0,0,0.402829317109147,0.760272105718513,0,0,0,0.0892997282840798,0.22452937262617,0.450445921933289,0,0,0,0,0,0.436094052142534,0,0,0.662045904066094,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0.168336113954066,0.375355559615893,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0,0,0.18611685633159,0.506328996723799,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.354920400119532,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.614942192715568,0.171567810298526,0,0,0.201057944823262,0,0,0,0,0.34779121492523,0,0,0,0.190254152234598,0,0,0.492434012174795,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0.492663237895943,0.176096868026452,0,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0.788123040807709,3.01878604803324,1.02674429023799,0.254094624222463,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0.831883446123229,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,0.431428401637234,0.320182673410333,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.482561763430822,0,0,0,0,0,0,0.483437798366489,0,0.276242966807689,0.114814448164607,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.309123034943167,0,0,0,0,3.21367859688319,0.193341436584244,0,0,0.275673144969061,0.322260734604821,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0.638063562472921,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0,0.487426979262569,0,0,0.707027159768564,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.192444225451024,0,0,0.376575203107117,0,0,0,0.459446800413919,0,0.764637207142375,0.569647187174163,0.476463550915578,0,0,0,0,0.106824071127473,0,0.245040215981032,0.371606350251437,0.144269212976445,0.355709216742071,0,0,0,0.635020748171649,0.649243880549111,0.561594356226918,0,0.313359791546046,0,0,0.321176150207399,0.403599414382095,0.425846237690326,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0.284136146806413,0.23874448473769,0.593929361665277,0,0,0.281338832821026,0.111308705022906,0.329607748453519,1.90012867315194,0.597743964753209,0,0,0.102268682502155,0.492339221844278,0,0.0898683511473268,0.179021174675609,0,0.394573622547734,0,0,0,0.278304294485554,0,0,0.174919999992391,0,0.227586896570999,0,0,0,0.291604613383254,0.173624994933292,0,1.08536794762867,0,0.331737779793674,0.295547618953547,0,0.544692317594951,0.139423744278603,0.461701551022782,0,0.23056390438806,0.179515288819544,0.434589487688032,0,0.274792780205587,0,0,0.470940769185074,0,0.225595660617181,0,0.335643173951685,0.569261198172555,0,0,0,0.282706142867882,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0.86494757262552,0.522109747527277,0.269604531922708,0,0,0.91227394607833,0.19566461893209,0.242780379534093,0.394584402849391,1.20990716048664,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0.277349346026277,0.173559738335131,0.0979923974143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| ||
|short_description=p@chr10:32342346..32342350,- | |short_description=p@chr10:32342346..32342350,- | ||
}} | }} |
Latest revision as of 13:16, 23 July 2015
Short description: | p@chr10:32342346..32342350, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:32342346..32342350, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.54e-16 | 6 |
natural killer cell | 4.94e-15 | 3 |
pro-NK cell | 4.94e-15 | 3 |
androgen binding protein secreting cell | 2.63e-12 | 1 |
seminiferous tubule epithelial cell | 2.63e-12 | 1 |
Sertoli cell | 2.63e-12 | 1 |
mature alpha-beta T cell | 1.06e-09 | 18 |
alpha-beta T cell | 1.06e-09 | 18 |
immature T cell | 1.06e-09 | 18 |
mature T cell | 1.06e-09 | 18 |
immature alpha-beta T cell | 1.06e-09 | 18 |
leukocyte | 1.17e-07 | 136 |
T cell | 5.00e-07 | 25 |
pro-T cell | 5.00e-07 | 25 |
lymphoid lineage restricted progenitor cell | 6.07e-07 | 52 |
lymphocyte | 8.36e-07 | 53 |
common lymphoid progenitor | 8.36e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.63e-12 | 1 |
seminiferous tubule of testis | 2.63e-12 | 1 |
epithelium of male gonad | 2.63e-12 | 1 |
epithelial cord | 2.63e-12 | 1 |
sex cord | 2.63e-12 | 1 |
seminiferous tubule epithelium | 2.63e-12 | 1 |
testis sex cord | 2.63e-12 | 1 |
genital ridge | 2.63e-12 | 1 |
primitive sex cord of indifferent gonad | 2.63e-12 | 1 |
coelomic epithelium | 2.63e-12 | 1 |
epithelium of gonad | 8.93e-07 | 2 |