FFCP PHASE1:Hg19::chr2:174293303..174293351,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:174293303..174293351,+ | |||
|description=CAGE_peak_at_chr2:174293303..174293351,+ | |description=CAGE_peak_at_chr2:174293303..174293351,+ | ||
|id=chr2:174293303..174293351,+ | |id=chr2:174293303..174293351,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.65e-24!43;CL:0000223!1.74e-16!59;CL:0002251!2.51e-16!21;CL:0002159!1.16e-13!13;CL:0000066!1.78e-13!254;CL:0002166!1.29e-12!3;CL:0002621!7.65e-12!3;CL:0000220!5.25e-11!246;CL:0002321!7.50e-11!248;CL:0002368!4.07e-10!13;CL:0002077!1.25e-09!33;CL:0000575!2.09e-08!2;CL:0000622!2.68e-07!5;CL:0000221!7.49e-07!71 | |ontology_enrichment_celltype=CL:0002076!2.65e-24!43;CL:0000223!1.74e-16!59;CL:0002251!2.51e-16!21;CL:0002159!1.16e-13!13;CL:0000066!1.78e-13!254;CL:0002166!1.29e-12!3;CL:0002621!7.65e-12!3;CL:0000220!5.25e-11!246;CL:0002321!7.50e-11!248;CL:0002368!4.07e-10!13;CL:0002077!1.25e-09!33;CL:0000575!2.09e-08!2;CL:0000622!2.68e-07!5;CL:0000221!7.49e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.62e-18;3!CL:0002252;1.61e-14;1!CL:0002076;2.04e-12;42!CL:0002368;8.27e-10;13!CL:0002600;6.57e-08;2 | |ontology_enrichment_celltype_v019=CL:0002166;1.62e-18;3!CL:0002252;1.61e-14;1!CL:0002076;2.04e-12;42!CL:0002368;8.27e-10;13!CL:0002600;6.57e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.48e-18,3;CL:0002076,6.41e-15,42;CL:0002252,8.17e-15,1;CL:0000223,1.17e-10,58;CL:0002368,1.04e-09,13;CL:0002600,7.03e-08,2;CL:0000066,2.42e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000223;3.23e-07;58 | |ontology_enrichment_development_v019=CL:0000223;3.23e-07;58 | ||
|ontology_enrichment_disease=DOID:1749!1.15e-12!14 | |ontology_enrichment_disease=DOID:1749!1.15e-12!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.31e-15;14 | |ontology_enrichment_disease_v019=DOID:1749;1.31e-15;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.71e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.25e-14!72;UBERON:0003729!8.05e-13!5;UBERON:0001949!7.65e-12!3;UBERON:0000166!2.48e-10!21;UBERON:0001444!3.26e-10!48;UBERON:0001708!1.46e-09!4;UBERON:0001704!1.46e-09!4;UBERON:0004119!1.51e-09!169;UBERON:0000925!1.51e-09!169;UBERON:0006595!1.51e-09!169;UBERON:0003343!1.64e-09!4;UBERON:0004785!1.64e-09!4;UBERON:0000165!2.17e-09!28;UBERON:0000930!2.17e-09!28;UBERON:0000161!7.70e-09!35;UBERON:0000065!8.90e-08!53 | |ontology_enrichment_uberon=UBERON:0001004!2.25e-14!72;UBERON:0003729!8.05e-13!5;UBERON:0001949!7.65e-12!3;UBERON:0000166!2.48e-10!21;UBERON:0001444!3.26e-10!48;UBERON:0001708!1.46e-09!4;UBERON:0001704!1.46e-09!4;UBERON:0004119!1.51e-09!169;UBERON:0000925!1.51e-09!169;UBERON:0006595!1.51e-09!169;UBERON:0003343!1.64e-09!4;UBERON:0004785!1.64e-09!4;UBERON:0000165!2.17e-09!28;UBERON:0000930!2.17e-09!28;UBERON:0000161!7.70e-09!35;UBERON:0000065!8.90e-08!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.11e-14;4!UBERON:0004785;2.11e-14;4!UBERON:0001708;3.85e-14;4!UBERON:0008895;3.85e-14;4!UBERON:0011159;1.66e-11;5!UBERON:0000974;6.49e-10;6!UBERON:0003126;1.39e-08;7!UBERON:0001005;1.39e-08;7!UBERON:0002370;4.23e-08;2!UBERON:0005058;4.23e-08;2!UBERON:0009113;4.23e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0003343;2.11e-14;4!UBERON:0004785;2.11e-14;4!UBERON:0001708;3.85e-14;4!UBERON:0008895;3.85e-14;4!UBERON:0011159;1.66e-11;5!UBERON:0000974;6.49e-10;6!UBERON:0003126;1.39e-08;7!UBERON:0001005;1.39e-08;7!UBERON:0002370;4.23e-08;2!UBERON:0005058;4.23e-08;2!UBERON:0009113;4.23e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.76e-14,4;UBERON:0004785,2.76e-14,4;UBERON:0001708,3.61e-14,4;UBERON:0008895,3.61e-14,4;UBERON:0000974,1.13e-12,10;UBERON:0011159,1.58e-11,5;UBERON:0001004,1.15e-10,74;UBERON:0010188,9.26e-10,6;UBERON:0002539,9.26e-10,6;UBERON:0008816,9.26e-10,6;UBERON:0004119,1.14e-08,160;UBERON:0000925,1.14e-08,160;UBERON:0006595,1.14e-08,160;UBERON:0003126,1.47e-08,7;UBERON:0001005,1.47e-08,7;UBERON:0000065,1.71e-08,54;UBERON:0008814,3.05e-07,18 | |||
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| ||
|short_description=p@chr2:174293303..174293351,+ | |short_description=p@chr2:174293303..174293351,+ | ||
}} | }} |
Latest revision as of 02:34, 29 July 2015
Short description: | p@chr2:174293303..174293351, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:174293303..174293351, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.48e-18 | 3 |
endo-epithelial cell | 6.41e-15 | 42 |
epithelial cell of esophagus | 8.17e-15 | 1 |
endodermal cell | 1.17e-10 | 58 |
respiratory epithelial cell | 1.04e-09 | 13 |
smooth muscle cell of trachea | 7.03e-08 | 2 |
epithelial cell | 2.42e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 2.76e-14 | 4 |
respiratory system mucosa | 2.76e-14 | 4 |
jaw skeleton | 3.61e-14 | 4 |
splanchnocranium | 3.61e-14 | 4 |
neck | 1.13e-12 | 10 |
primary subdivision of cranial skeletal system | 1.58e-11 | 5 |
respiratory system | 1.15e-10 | 74 |
protuberance | 9.26e-10 | 6 |
pharyngeal arch | 9.26e-10 | 6 |
embryonic head | 9.26e-10 | 6 |
endoderm-derived structure | 1.14e-08 | 160 |
endoderm | 1.14e-08 | 160 |
presumptive endoderm | 1.14e-08 | 160 |
trachea | 1.47e-08 | 7 |
respiratory airway | 1.47e-08 | 7 |
respiratory tract | 1.71e-08 | 54 |
pharyngeal arch system | 3.05e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.71e-15 | 14 |