FFCP PHASE1:Hg19::chr21:46546516..46546524,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:46546516..46546524,+ | |||
|coexpression_cluster_id=C87 | |coexpression_cluster_id=C87 | ||
|description=CAGE_peak_at_chr21:46546516..46546524,+ | |description=CAGE_peak_at_chr21:46546516..46546524,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000242!1.28e-07!2 | |ontology_enrichment_celltype=CL:0000242!1.28e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000243;3.38e-07;15!CL:0000125;3.38e-07;15 | |ontology_enrichment_celltype_v019=CL:0000243;3.38e-07;15!CL:0000125;3.38e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000243,3.38e-07,15;CL:0000125,3.38e-07,15;CL:0000030,3.38e-07,15;CL:0000339,3.38e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3!UBERON:0006215;5.96e-34;3!UBERON:0006238;2.16e-10;10!CL:0000339;3.38e-07;15 | |ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3!UBERON:0006215;5.96e-34;3!UBERON:0006238;2.16e-10;10!CL:0000339;3.38e-07;15 | ||
|ontology_enrichment_disease=DOID:5409!1.43e-13!4;DOID:1325!3.84e-08!7;DOID:3904!3.84e-08!7 | |ontology_enrichment_disease=DOID:5409!1.43e-13!4;DOID:1325!3.84e-08!7;DOID:3904!3.84e-08!7 | ||
|ontology_enrichment_disease_v019=DOID:3093;1.22e-09;11 | |ontology_enrichment_disease_v019=DOID:3093;1.22e-09;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,1.22e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0001905!4.08e-26!2;UBERON:0002757!4.08e-26!2;UBERON:0010134!4.08e-26!2;UBERON:0002784!4.08e-26!2;UBERON:0005408!4.08e-26!2;UBERON:0001899!4.08e-26!2;UBERON:0003296!1.43e-13!4;UBERON:0010133!1.43e-13!4;UBERON:0004733!5.22e-10!12;UBERON:0002028!5.22e-10!12;UBERON:0007277!5.22e-10!12;UBERON:0002037!1.75e-09!6;UBERON:0006215!1.75e-09!6;UBERON:0004732!2.80e-09!13;UBERON:0001894!3.84e-08!7;UBERON:0006222!3.84e-08!7;UBERON:0003076!4.12e-08!15;UBERON:0003057!4.12e-08!15;UBERON:0000955!4.52e-08!69;UBERON:0006238!4.52e-08!69;UBERON:0003127!1.75e-07!2;UBERON:0000063!1.94e-07!97;UBERON:0000073!1.98e-07!94;UBERON:0001016!1.98e-07!94 | |ontology_enrichment_uberon=UBERON:0001905!4.08e-26!2;UBERON:0002757!4.08e-26!2;UBERON:0010134!4.08e-26!2;UBERON:0002784!4.08e-26!2;UBERON:0005408!4.08e-26!2;UBERON:0001899!4.08e-26!2;UBERON:0003296!1.43e-13!4;UBERON:0010133!1.43e-13!4;UBERON:0004733!5.22e-10!12;UBERON:0002028!5.22e-10!12;UBERON:0007277!5.22e-10!12;UBERON:0002037!1.75e-09!6;UBERON:0006215!1.75e-09!6;UBERON:0004732!2.80e-09!13;UBERON:0001894!3.84e-08!7;UBERON:0006222!3.84e-08!7;UBERON:0003076!4.12e-08!15;UBERON:0003057!4.12e-08!15;UBERON:0000955!4.52e-08!69;UBERON:0006238!4.52e-08!69;UBERON:0003127!1.75e-07!2;UBERON:0000063!1.94e-07!97;UBERON:0000073!1.98e-07!94;UBERON:0001016!1.98e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0002037;9.07e-18;6!UBERON:0002680;2.45e-12;9!UBERON:0001895;2.45e-12;9!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0004732;5.70e-09;13!UBERON:0001016;8.24e-08;83 | |ontology_enrichment_uberon_v019=UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0002037;9.07e-18;6!UBERON:0002680;2.45e-12;9!UBERON:0001895;2.45e-12;9!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0004732;5.70e-09;13!UBERON:0001016;8.24e-08;83 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0002037,9.07e-18,6;UBERON:0006215,9.07e-18,6;UBERON:0002680,2.45e-12,9;UBERON:0001895,2.45e-12,9;UBERON:0010092,2.45e-12,9;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p@chr21:46546516..46546524,+ | |short_description=p@chr21:46546516..46546524,+ | ||
}} | }} |
Latest revision as of 18:35, 28 July 2015
Short description: | p@chr21:46546516..46546524, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:46546516..46546524, + |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 3.38e-07 | 15 |
glial cell | 3.38e-07 | 15 |
glioblast | 3.38e-07 | 15 |
glioblast (sensu Vertebrata) | 3.38e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
cerebellum | 9.07e-18 | 6 |
rhombic lip | 9.07e-18 | 6 |
regional part of metencephalon | 2.45e-12 | 9 |
metencephalon | 2.45e-12 | 9 |
future metencephalon | 2.45e-12 | 9 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.22e-09 | 11 |