FFCP PHASE1:Hg19::chr12:52585765..52585777,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144501 | |EntrezGene=144501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27056 | |HGNC=27056 | ||
|TSSclassifier=strong | |||
|UniProt=Q6KB66 | |UniProt=Q6KB66 | ||
|association_with_transcript=6bp_to_ENST00000313234,ENST00000394815,NM_001081492,NM_182507,uc001rzx.2,uc001rzy.2_5end | |association_with_transcript=6bp_to_ENST00000313234,ENST00000394815,NM_001081492,NM_182507,uc001rzx.2,uc001rzy.2_5end | ||
|cluster_id=chr12:52585765..52585777,- | |||
|description=CAGE_peak_2_at_KRT80_5end | |description=CAGE_peak_2_at_KRT80_5end | ||
|id=chr12:52585765..52585777,- | |id=chr12:52585765..52585777,- | ||
|ontology_enrichment_celltype=CL:0000066!2.72e-44!254;CL:0000076!5.03e-14!62;CL:0002076!6.79e-11!43;CL:0000223!1.42e-10!59;CL:0000077!4.62e-10!19;CL:1000497!1.99e-07!18;CL:0002518!1.99e-07!18;CL:0000082!2.09e-07!19;CL:1000507!9.81e-07!12;CL:1000494!9.81e-07!12 | |ontology_enrichment_celltype=CL:0000066!2.72e-44!254;CL:0000076!5.03e-14!62;CL:0002076!6.79e-11!43;CL:0000223!1.42e-10!59;CL:0000077!4.62e-10!19;CL:1000497!1.99e-07!18;CL:0002518!1.99e-07!18;CL:0000082!2.09e-07!19;CL:1000507!9.81e-07!12;CL:1000494!9.81e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000507;5.16e-12;10!CL:1000494;5.16e-12;10!CL:0000077;9.33e-12;19!CL:1000497;1.27e-10;17!CL:0002518;1.27e-10;17!CL:1000449;7.16e-09;15!CL:0002076;2.85e-07;42!CL:0000082;7.06e-07;19 | |ontology_enrichment_celltype_v019=CL:1000507;5.16e-12;10!CL:1000494;5.16e-12;10!CL:0000077;9.33e-12;19!CL:1000497;1.27e-10;17!CL:0002518;1.27e-10;17!CL:1000449;7.16e-09;15!CL:0002076;2.85e-07;42!CL:0000082;7.06e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.78e-44,253;CL:0000076,3.11e-13,63;CL:1000507,5.19e-12,10;CL:1000494,5.19e-12,10;CL:0000077,8.99e-12,19;CL:0000223,2.09e-11,58;CL:0002076,2.39e-11,42;CL:1000497,1.27e-10,17;CL:0002518,1.27e-10,17;CL:1000449,7.19e-09,15;CL:0000082,6.37e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.17e-10;29!UBERON:0006595;1.86e-07;86 | |ontology_enrichment_development_v019=UBERON:0008947;1.17e-10;29!UBERON:0006595;1.86e-07;86 | ||
|ontology_enrichment_disease=DOID:305!6.58e-36!106;DOID:0050687!5.18e-27!143;DOID:162!1.74e-21!235;DOID:14566!3.99e-20!239;DOID:299!1.30e-12!25;DOID:1749!7.93e-11!14;DOID:7!2.26e-07!39 | |ontology_enrichment_disease=DOID:305!6.58e-36!106;DOID:0050687!5.18e-27!143;DOID:162!1.74e-21!235;DOID:14566!3.99e-20!239;DOID:299!1.30e-12!25;DOID:1749!7.93e-11!14;DOID:7!2.26e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:299;1.50e-16;25!DOID:1749;8.71e-15;14!DOID:305;5.27e-12;106!DOID:0050687;1.82e-07;143 | |ontology_enrichment_disease_v019=DOID:299;1.50e-16;25!DOID:1749;8.71e-15;14!DOID:305;5.27e-12;106!DOID:0050687;1.82e-07;143 | ||
|ontology_enrichment_disease_v019_2=DOID:305,9.96e-47,106;DOID:0050687,1.17e-35,143;DOID:162,5.64e-31,235;DOID:14566,1.23e-29,239;DOID:299,9.20e-17,25;DOID:1749,7.78e-15,14;DOID:7,6.94e-08,39;DOID:0050686,1.66e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.68e-19!169;UBERON:0000925!3.68e-19!169;UBERON:0006595!3.68e-19!169;UBERON:0001007!1.65e-17!155;UBERON:0001555!1.65e-17!155;UBERON:0007026!1.65e-17!155;UBERON:0000077!5.64e-16!130;UBERON:0001004!8.55e-16!72;UBERON:0001041!5.43e-15!98;UBERON:0004921!1.47e-14!129;UBERON:0004185!1.47e-14!129;UBERON:0000464!2.39e-14!104;UBERON:0000466!2.98e-14!126;UBERON:0000065!3.85e-12!53;UBERON:0000072!8.98e-12!46;UBERON:0008947!2.30e-11!38;UBERON:0003258!2.30e-11!38;UBERON:0001048!3.45e-11!168;UBERON:0005177!4.56e-11!107;UBERON:0000058!1.16e-10!26;UBERON:0003104!1.25e-10!238;UBERON:0009142!1.25e-10!238;UBERON:0005911!7.55e-10!82;UBERON:0002553!1.71e-09!70;UBERON:0000481!2.36e-09!347;UBERON:0009569!3.70e-09!113;UBERON:0000063!3.63e-08!97;UBERON:0000475!4.48e-08!365;UBERON:0001008!5.33e-08!45;UBERON:0003064!5.51e-08!37;UBERON:0000161!7.42e-08!35;UBERON:0006554!9.69e-08!44;UBERON:0000062!1.88e-07!511;UBERON:0004802!2.09e-07!19;UBERON:0000115!2.09e-07!19;UBERON:0002048!2.69e-07!22;UBERON:0000117!2.69e-07!22;UBERON:0000171!2.69e-07!22;UBERON:0000170!2.69e-07!22;UBERON:0005597!2.69e-07!22;UBERON:0000118!2.69e-07!22;UBERON:0000064!3.54e-07!219;UBERON:0003886!4.04e-07!63;UBERON:0000166!4.57e-07!21;UBERON:0001444!4.80e-07!48;UBERON:0002100!5.22e-07!216;UBERON:0000080!5.71e-07!18;UBERON:0002120!5.71e-07!18;UBERON:0004875!5.71e-07!18;UBERON:0005721!5.71e-07!18;UBERON:0005754!5.71e-07!18;UBERON:0007297!5.71e-07!18;UBERON:0005153!6.13e-07!37;UBERON:0004807!7.39e-07!28;UBERON:0009773!9.81e-07!12;UBERON:0001231!9.81e-07!12;UBERON:0004810!9.81e-07!12 | |ontology_enrichment_uberon=UBERON:0004119!3.68e-19!169;UBERON:0000925!3.68e-19!169;UBERON:0006595!3.68e-19!169;UBERON:0001007!1.65e-17!155;UBERON:0001555!1.65e-17!155;UBERON:0007026!1.65e-17!155;UBERON:0000077!5.64e-16!130;UBERON:0001004!8.55e-16!72;UBERON:0001041!5.43e-15!98;UBERON:0004921!1.47e-14!129;UBERON:0004185!1.47e-14!129;UBERON:0000464!2.39e-14!104;UBERON:0000466!2.98e-14!126;UBERON:0000065!3.85e-12!53;UBERON:0000072!8.98e-12!46;UBERON:0008947!2.30e-11!38;UBERON:0003258!2.30e-11!38;UBERON:0001048!3.45e-11!168;UBERON:0005177!4.56e-11!107;UBERON:0000058!1.16e-10!26;UBERON:0003104!1.25e-10!238;UBERON:0009142!1.25e-10!238;UBERON:0005911!7.55e-10!82;UBERON:0002553!1.71e-09!70;UBERON:0000481!2.36e-09!347;UBERON:0009569!3.70e-09!113;UBERON:0000063!3.63e-08!97;UBERON:0000475!4.48e-08!365;UBERON:0001008!5.33e-08!45;UBERON:0003064!5.51e-08!37;UBERON:0000161!7.42e-08!35;UBERON:0006554!9.69e-08!44;UBERON:0000062!1.88e-07!511;UBERON:0004802!2.09e-07!19;UBERON:0000115!2.09e-07!19;UBERON:0002048!2.69e-07!22;UBERON:0000117!2.69e-07!22;UBERON:0000171!2.69e-07!22;UBERON:0000170!2.69e-07!22;UBERON:0005597!2.69e-07!22;UBERON:0000118!2.69e-07!22;UBERON:0000064!3.54e-07!219;UBERON:0003886!4.04e-07!63;UBERON:0000166!4.57e-07!21;UBERON:0001444!4.80e-07!48;UBERON:0002100!5.22e-07!216;UBERON:0000080!5.71e-07!18;UBERON:0002120!5.71e-07!18;UBERON:0004875!5.71e-07!18;UBERON:0005721!5.71e-07!18;UBERON:0005754!5.71e-07!18;UBERON:0007297!5.71e-07!18;UBERON:0005153!6.13e-07!37;UBERON:0004807!7.39e-07!28;UBERON:0009773!9.81e-07!12;UBERON:0001231!9.81e-07!12;UBERON:0004810!9.81e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.16e-12;10!UBERON:0009773;5.16e-12;10!UBERON:0001231;5.16e-12;10!UBERON:0004810;5.16e-12;10!UBERON:0000072;5.01e-09;37!UBERON:0006555;7.16e-09;15!UBERON:0004819;7.16e-09;15!UBERON:0001285;7.16e-09;15!UBERON:0007684;7.16e-09;15!UBERON:0001737;3.14e-08;9!UBERON:0001557;3.14e-08;9!UBERON:0001004;2.32e-07;65!UBERON:0004807;2.41e-07;22!UBERON:0002113;2.54e-07;24!UBERON:0011143;2.54e-07;24!UBERON:0004802;7.06e-07;19!UBERON:0000115;7.06e-07;19!UBERON:0001851;7.51e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0004211;5.16e-12;10!UBERON:0009773;5.16e-12;10!UBERON:0001231;5.16e-12;10!UBERON:0004810;5.16e-12;10!UBERON:0000072;5.01e-09;37!UBERON:0006555;7.16e-09;15!UBERON:0004819;7.16e-09;15!UBERON:0001285;7.16e-09;15!UBERON:0007684;7.16e-09;15!UBERON:0001737;3.14e-08;9!UBERON:0001557;3.14e-08;9!UBERON:0001004;2.32e-07;65!UBERON:0004807;2.41e-07;22!UBERON:0002113;2.54e-07;24!UBERON:0011143;2.54e-07;24!UBERON:0004802;7.06e-07;19!UBERON:0000115;7.06e-07;19!UBERON:0001851;7.51e-07;15 | ||
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| ||
|short_description=p2@KRT80 | |short_description=p2@KRT80 | ||
}} | }} |
Latest revision as of 21:48, 18 September 2015
Short description: | p2@KRT80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRT80_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000313234, ENST00000394815, NM_001081492, NM_182507, uc001rzx.2, uc001rzy.2_5end |
EntrezGene: | KRT80 |
HGNC: | 27056 |
UniProt: | Q6KB66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.78e-44 | 253 |
squamous epithelial cell | 3.11e-13 | 63 |
kidney tubule cell | 5.19e-12 | 10 |
nephron tubule epithelial cell | 5.19e-12 | 10 |
mesothelial cell | 8.99e-12 | 19 |
endodermal cell | 2.09e-11 | 58 |
endo-epithelial cell | 2.39e-11 | 42 |
kidney cell | 1.27e-10 | 17 |
kidney epithelial cell | 1.27e-10 | 17 |
epithelial cell of nephron | 7.19e-09 | 15 |
epithelial cell of lung | 6.37e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 5.32e-13 | 101 |
foregut | 1.61e-12 | 87 |
nephron tubule epithelium | 5.19e-12 | 10 |
respiratory system | 5.64e-12 | 74 |
segment of respiratory tract | 2.27e-11 | 47 |
digestive system | 2.52e-11 | 145 |
digestive tract | 2.52e-11 | 145 |
primitive gut | 2.52e-11 | 145 |
subdivision of digestive tract | 8.83e-11 | 118 |
respiratory primordium | 1.08e-10 | 38 |
endoderm of foregut | 1.08e-10 | 38 |
endoderm-derived structure | 1.71e-10 | 160 |
endoderm | 1.71e-10 | 160 |
presumptive endoderm | 1.71e-10 | 160 |
respiratory tract | 1.17e-09 | 54 |
excretory tube | 1.69e-09 | 16 |
kidney epithelium | 1.69e-09 | 16 |
nephron epithelium | 7.19e-09 | 15 |
renal tubule | 7.19e-09 | 15 |
nephron tubule | 7.19e-09 | 15 |
nephron | 7.19e-09 | 15 |
uriniferous tubule | 7.19e-09 | 15 |
nephrogenic mesenchyme | 7.19e-09 | 15 |
subdivision of trunk | 1.29e-08 | 112 |
larynx | 3.08e-08 | 9 |
kidney | 2.28e-07 | 26 |
kidney mesenchyme | 2.28e-07 | 26 |
upper urinary tract | 2.28e-07 | 26 |
kidney rudiment | 2.28e-07 | 26 |
kidney field | 2.28e-07 | 26 |
upper respiratory tract | 3.97e-07 | 19 |
respiratory tract epithelium | 6.37e-07 | 19 |
lung epithelium | 6.37e-07 | 19 |
cortex | 7.67e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.96e-47 | 106 |
cell type cancer | 1.17e-35 | 143 |
cancer | 5.64e-31 | 235 |
disease of cellular proliferation | 1.23e-29 | 239 |
adenocarcinoma | 9.20e-17 | 25 |
squamous cell carcinoma | 7.78e-15 | 14 |
disease of anatomical entity | 6.94e-08 | 39 |
organ system cancer | 1.66e-07 | 137 |