FFCP PHASE1:Hg19::chr14:103603686..103603710,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:103603686..103603710,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr14:103603686..103603710,+ | |description=CAGE_peak_at_chr14:103603686..103603710,+ | ||
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|ontology_enrichment_celltype=CL:0002009!2.72e-46!65;CL:0002194!5.18e-46!63;CL:0000576!5.18e-46!63;CL:0000040!5.18e-46!63;CL:0000559!5.18e-46!63;CL:0000557!5.30e-43!71;CL:0002057!9.42e-43!42;CL:0000839!8.11e-42!70;CL:0000766!1.44e-41!76;CL:0000860!1.86e-41!45;CL:0000763!5.88e-27!112;CL:0000049!5.88e-27!112;CL:0002087!7.09e-22!119;CL:0000738!2.07e-21!140;CL:0002031!2.29e-20!124;CL:0000037!2.59e-15!172;CL:0000566!2.59e-15!172;CL:0002032!5.44e-15!165;CL:0000837!5.44e-15!165;CL:0000988!1.23e-13!182 | |ontology_enrichment_celltype=CL:0002009!2.72e-46!65;CL:0002194!5.18e-46!63;CL:0000576!5.18e-46!63;CL:0000040!5.18e-46!63;CL:0000559!5.18e-46!63;CL:0000557!5.30e-43!71;CL:0002057!9.42e-43!42;CL:0000839!8.11e-42!70;CL:0000766!1.44e-41!76;CL:0000860!1.86e-41!45;CL:0000763!5.88e-27!112;CL:0000049!5.88e-27!112;CL:0002087!7.09e-22!119;CL:0000738!2.07e-21!140;CL:0002031!2.29e-20!124;CL:0000037!2.59e-15!172;CL:0000566!2.59e-15!172;CL:0002032!5.44e-15!165;CL:0000837!5.44e-15!165;CL:0000988!1.23e-13!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.53e-47;33!CL:0002057;3.53e-47;33!CL:0000576;2.82e-37;48!CL:0000473;1.30e-34;39!CL:0000234;1.30e-34;39!CL:0000766;2.63e-21;69!CL:0002619;5.52e-20;3!CL:0000763;1.84e-11;100!CL:0002087;7.27e-10;104!CL:0000738;3.37e-08;136 | |ontology_enrichment_celltype_v019=CL:0000860;3.53e-47;33!CL:0002057;3.53e-47;33!CL:0000576;2.82e-37;48!CL:0000473;1.30e-34;39!CL:0000234;1.30e-34;39!CL:0000766;2.63e-21;69!CL:0002619;5.52e-20;3!CL:0000763;1.84e-11;100!CL:0002087;7.27e-10;104!CL:0000738;3.37e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,7.82e-53,59;CL:0000576,7.82e-53,59;CL:0000040,7.82e-53,59;CL:0000559,7.82e-53,59;CL:0000860,3.89e-52,42;CL:0002057,3.89e-52,42;CL:0002009,5.48e-51,61;CL:0000473,3.10e-50,48;CL:0000234,3.10e-50,48;CL:0000839,7.43e-47,66;CL:0000766,9.13e-47,72;CL:0000557,4.21e-46,67;CL:0000763,8.14e-30,108;CL:0000049,8.14e-30,108;CL:0002087,3.47e-25,115;CL:0002031,5.84e-24,120;CL:0000738,8.87e-23,136;CL:0002619,6.09e-20,3;CL:0002032,1.52e-18,161;CL:0000837,1.52e-18,161;CL:0000037,1.39e-17,168;CL:0000988,1.85e-16,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-33;42!CL:0000049;2.78e-08;108 | |ontology_enrichment_development_v019=CL:0002057;1.26e-33;42!CL:0000049;2.78e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.67e-39!112;UBERON:0002371!2.61e-38!80;UBERON:0002390!8.97e-38!102;UBERON:0003061!8.97e-38!102;UBERON:0001474!1.44e-34!86;UBERON:0002405!6.67e-31!115;UBERON:0004765!3.47e-27!101;UBERON:0001434!3.47e-27!101;UBERON:0003081!5.50e-14!216;UBERON:0002204!2.92e-12!167;UBERON:0000926!3.59e-09!448;UBERON:0004120!3.59e-09!448;UBERON:0006603!3.59e-09!448;UBERON:0002294!2.70e-07!7;UBERON:0001173!2.70e-07!7;UBERON:0004912!2.70e-07!7;UBERON:0000062!8.24e-07!511 | |ontology_enrichment_uberon=UBERON:0002193!7.67e-39!112;UBERON:0002371!2.61e-38!80;UBERON:0002390!8.97e-38!102;UBERON:0003061!8.97e-38!102;UBERON:0001474!1.44e-34!86;UBERON:0002405!6.67e-31!115;UBERON:0004765!3.47e-27!101;UBERON:0001434!3.47e-27!101;UBERON:0003081!5.50e-14!216;UBERON:0002204!2.92e-12!167;UBERON:0000926!3.59e-09!448;UBERON:0004120!3.59e-09!448;UBERON:0006603!3.59e-09!448;UBERON:0002294!2.70e-07!7;UBERON:0001173!2.70e-07!7;UBERON:0004912!2.70e-07!7;UBERON:0000062!8.24e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;6.52e-08;1!UBERON:0005208;6.52e-08;1!UBERON:0004145;6.52e-08;1!UBERON:0005946;6.52e-08;1!UBERON:0005965;6.52e-08;1!UBERON:0002078;6.52e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0002134;6.52e-08;1!UBERON:0005208;6.52e-08;1!UBERON:0004145;6.52e-08;1!UBERON:0005946;6.52e-08;1!UBERON:0005965;6.52e-08;1!UBERON:0002078;6.52e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.37e-40,76;UBERON:0002390,2.58e-39,98;UBERON:0003061,2.58e-39,98;UBERON:0001474,5.67e-37,82;UBERON:0002193,2.85e-35,108;UBERON:0004765,2.48e-33,90;UBERON:0002405,3.98e-32,93;UBERON:0001434,1.37e-29,100;UBERON:0003081,3.22e-18,203;UBERON:0002204,5.41e-16,167;UBERON:0000926,5.79e-10,315;UBERON:0004120,5.79e-10,315;UBERON:0006603,5.79e-10,315;UBERON:0002134,4.99e-08,1;UBERON:0005208,4.99e-08,1;UBERON:0005946,4.99e-08,1;UBERON:0005965,4.99e-08,1;UBERON:0002078,4.99e-08,1 | |||
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|short_description=p@chr14:103603686..103603710,+ | |short_description=p@chr14:103603686..103603710,+ | ||
}} | }} |
Latest revision as of 18:17, 24 July 2015
Short description: | p@chr14:103603686..103603710, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:103603686..103603710, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 7.82e-53 | 59 |
monocyte | 7.82e-53 | 59 |
monoblast | 7.82e-53 | 59 |
promonocyte | 7.82e-53 | 59 |
classical monocyte | 3.89e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.89e-52 | 42 |
macrophage dendritic cell progenitor | 5.48e-51 | 61 |
defensive cell | 3.10e-50 | 48 |
phagocyte | 3.10e-50 | 48 |
myeloid lineage restricted progenitor cell | 7.43e-47 | 66 |
myeloid leukocyte | 9.13e-47 | 72 |
granulocyte monocyte progenitor cell | 4.21e-46 | 67 |
myeloid cell | 8.14e-30 | 108 |
common myeloid progenitor | 8.14e-30 | 108 |
nongranular leukocyte | 3.47e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 5.84e-24 | 120 |
leukocyte | 8.87e-23 | 136 |
adult endothelial progenitor cell | 6.09e-20 | 3 |
hematopoietic oligopotent progenitor cell | 1.52e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-18 | 161 |
hematopoietic stem cell | 1.39e-17 | 168 |
hematopoietic cell | 1.85e-16 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.37e-40 | 76 |
hematopoietic system | 2.58e-39 | 98 |
blood island | 2.58e-39 | 98 |
bone element | 5.67e-37 | 82 |
hemolymphoid system | 2.85e-35 | 108 |
skeletal element | 2.48e-33 | 90 |
immune system | 3.98e-32 | 93 |
skeletal system | 1.37e-29 | 100 |
lateral plate mesoderm | 3.22e-18 | 203 |
musculoskeletal system | 5.41e-16 | 167 |
mesoderm | 5.79e-10 | 315 |
mesoderm-derived structure | 5.79e-10 | 315 |
presumptive mesoderm | 5.79e-10 | 315 |
tricuspid valve | 4.99e-08 | 1 |
right atrium valve | 4.99e-08 | 1 |
outflow tract of atrium | 4.99e-08 | 1 |
outflow part of right atrium | 4.99e-08 | 1 |
right cardiac atrium | 4.99e-08 | 1 |