FFCP PHASE1:Hg19::chr20:49348006..49348019,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:49348006..49348019,+
|short_description=p5@PARD6B
|description=CAGE_peak_5_at_PARD6B_5end
|association_with_transcript=-61bp_to_ENST00000371610,NM_032521,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84612 | |EntrezGene=84612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16245 | |HGNC=16245 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYG5 | |UniProt=Q9BYG5 | ||
|association_with_transcript=-61bp_to_ENST00000371610,NM_032521,uc002xvo.2_5end | |||
|cluster_id=chr20:49348006..49348019,+ | |||
|coexpression_cluster_id=C1871 | |||
|description=CAGE_peak_5_at_PARD6B_5end | |||
|id=chr20:49348006..49348019,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.40e-20!254;CL:0000223!1.34e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.55e-07;7!CL:0000586;1.55e-07;7!CL:1000415;2.07e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.74e-11,253;CL:0000039,7.36e-08,7;CL:0000586,7.36e-08,7;CL:1000415,2.16e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;4.28e-16;10!UBERON:0007687;4.28e-16;10!UBERON:0003104;9.81e-09;31 | |||
|ontology_enrichment_disease=DOID:0050687!1.01e-34!143;DOID:305!5.21e-33!106;DOID:14566!1.41e-29!239;DOID:162!7.41e-29!235;DOID:299!6.82e-14!25;DOID:7!8.84e-12!39;DOID:0050686!1.86e-08!137;DOID:3095!1.72e-07!22;DOID:2994!1.72e-07!22;DOID:3119!6.18e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;1.81e-14;25!DOID:5093;5.28e-09;4!DOID:1612;5.28e-09;4!DOID:4468;1.94e-08;2!DOID:7;3.27e-08;39!DOID:305;1.92e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.52e-19,106;DOID:0050687,2.10e-18,143;DOID:299,3.24e-14,25;DOID:162,4.64e-11,235;DOID:14566,1.21e-10,239;DOID:7,3.59e-10,39;DOID:5093,5.42e-09,4;DOID:1612,5.42e-09,4;DOID:4468,1.93e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005177!7.49e-09!107;UBERON:0005911!8.32e-08!82;UBERON:0005172!1.50e-07!55;UBERON:0005173!1.50e-07!55;UBERON:0001007!2.81e-07!155;UBERON:0001555!2.81e-07!155;UBERON:0007026!2.81e-07!155;UBERON:0004119!3.33e-07!169;UBERON:0000925!3.33e-07!169;UBERON:0006595!3.33e-07!169;UBERON:0000489!8.85e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.93e-12;24!UBERON:0011143;2.93e-12;24!UBERON:0000489;8.63e-10;29!UBERON:0006554;2.14e-09;30!UBERON:0001008;2.14e-09;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,5.50e-11,26;UBERON:0003918,5.50e-11,26;UBERON:0011143,5.50e-11,26;UBERON:0005095,5.50e-11,26;UBERON:0007687,5.50e-11,26;UBERON:0009569,6.01e-10,112;UBERON:0005177,3.80e-09,101;UBERON:0000489,6.87e-09,31;UBERON:0005172,9.45e-09,54;UBERON:0005173,9.45e-09,54;UBERON:0006554,9.77e-08,47;UBERON:0002417,1.42e-07,60;UBERON:0000916,1.42e-07,60;UBERON:0001008,1.60e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0.0821005894499457,0.157421562627358,0,0,0,1.83884244895785,0,0.369754010166788,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0.786021525498329,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.263504357079378,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.731842236777572,0.927708378250397,1.04574548582567,0.725627385107593,1.26160425437814,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,1.72183813960359,0,0.109750285408626,0,0,0.370353780634118,0,0,0,0.34779121492523,0,0,0,0,3.1608175918371,8.58486162094873,0,0,0,0.93733833986777,0,0.283550194484773,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0.0920809889358963,0,0,0,2.70719767744447,1.07821471946181,0,0,0.844413031143006,0,0,0.215915916102139,0,0.812839312631559,0.501689773854853,1.01950509218015,0,0.671624264166535,0.219259876645935,0,1.02580050046556,1.31205858279882,0.325378394664303,0.824328093181778,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,1.06824071127473,1.92495971052672,0,0.185803175125719,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0,0,1.12284324244932,0,0.849523652246594,0,0,0.71623345421307,0,1.84296421259539,0,0,0.890469640183247,0,0,0,0.276283915531148,0.251932747854276,0.613612095012929,0,0,1.43789361835723,0.716084698702437,0,0,0,0,0,0.0927680981618513,0,7.29197731038653,0.437299999980979,0,0.455173793141999,0,1.41832609060762,0.689486746482929,1.16641845353302,0,0,0.120596438625408,0,0.442317039724898,0,0.219385397153973,0.21787692703798,0.278847488557207,0.0769502585037971,0.683652335082007,1.38338342632836,0.359030577639089,1.95565269459615,0.31900115973192,0.274792780205587,2.66517388009317,0,0,0,0.676786981851542,0.392125068635479,0.167821586975843,0.37950746544837,0,5.69694774225673,3.26465616318295,1.13082457147153,0.216388639742091,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0,0,1.76098157038881,0.242780379534093,0.789168805698781,1.20990716048664,0,0,0.60129367765797,0,0,0,0.941798755221676,0,1.13843818411917,0,0.867798691675654,1.66587075604442,0.69647365264322,0.52418000472609,0.343972064943233,0,0.292357268344742,0.164230914106418,0.193978032976839,0.264768380074501,1.80784592624426,0,0,0.126621591911757,1.17330829640882,1.52301758477914,0.213452994739353,0.999048047910651,0.864542502924636,0.80175617316141,0,0.288109595976299,0.248505071130865,0.471388069233591,0.135904206073614,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,1.16495949527454,0.86661500537946,0.412079291905832,0.26961417541674,0.984274815147488,0.0846733320657845,0,0,0.803765742325096,0.962776056180637,1.66176135211674,0,0,0.0607495566580247,0,2.04894838977915,1.41627387964495,3.06240975906279,0,0.383830394638891,0,0.662091970365432,2.28841683889275,0,0.864221491201268,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,1.53978154095896,0,1.17466153824464,0.314408610199332,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0.942324577501406,0,0.122026264901963,0,0,0,0.0620964029413835,2.90532133366085,0,0,0,0.470531639396343,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0.385239660814607,1.28664954824955,1.30497145982606,0.226705925512272,0.463044948647668,0.244736704506468,0,0,0.657852148736121,0.353378291891762,0.38582807654183,0.844712203265363,0.76872455576384,0,0,0,0,0.132864840313363,0,0.327609848846413,0.245772908753719,2.74705760366215,0,0,0.344429959321631,0,0,0.419638523158333,0,0,0,0.629063767423586,0.109209638192014,0.33946505990805,0,1.61116493536703,1.11728983594649,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0.138314504928436,0,0,0.392590874004102,0.11796972334774,0.183428598521679,1.61735932610474,0,0.690359926060101,0,0.225630985047772,0.20170506870352,0,0,0.327543835020193,0.443568258651136,0.0675375846183947,0,0,0,0,0,0,0.351742488719241,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| ||
|short_description=p5@PARD6B | |||
}} | }} |
Latest revision as of 22:14, 16 September 2015
Short description: | p5@PARD6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PARD6B_5end |
Coexpression cluster: | C1871_breast_MCF7_clear_renal_amniotic_leiomyoblastoma_choriocarcinoma |
Association with transcript: | -61bp_to_ENST00000371610, NM_032521, uc002xvo.2_5end |
EntrezGene: | PARD6B |
HGNC: | 16245 |
UniProt: | Q9BYG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.74e-11 | 253 |
germ line cell | 7.36e-08 | 7 |
germ cell | 7.36e-08 | 7 |
epithelial cell of gall bladder | 2.16e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
kidney | 5.50e-11 | 26 |
kidney mesenchyme | 5.50e-11 | 26 |
upper urinary tract | 5.50e-11 | 26 |
kidney rudiment | 5.50e-11 | 26 |
kidney field | 5.50e-11 | 26 |
subdivision of trunk | 6.01e-10 | 112 |
trunk region element | 3.80e-09 | 101 |
cavitated compound organ | 6.87e-09 | 31 |
abdomen element | 9.45e-09 | 54 |
abdominal segment element | 9.45e-09 | 54 |
urinary system structure | 9.77e-08 | 47 |
abdominal segment of trunk | 1.42e-07 | 60 |
abdomen | 1.42e-07 | 60 |
renal system | 1.60e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.52e-19 | 106 |
cell type cancer | 2.10e-18 | 143 |
adenocarcinoma | 3.24e-14 | 25 |
cancer | 4.64e-11 | 235 |
disease of cellular proliferation | 1.21e-10 | 239 |
disease of anatomical entity | 3.59e-10 | 39 |
thoracic cancer | 5.42e-09 | 4 |
breast cancer | 5.42e-09 | 4 |
clear cell adenocarcinoma | 1.93e-08 | 2 |