FFCP PHASE1:Hg19::chr1:174818388..174818392,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:174818388..174818392,- | |||
|description=CAGE_peak_at_chr1:174818388..174818392,- | |description=CAGE_peak_at_chr1:174818388..174818392,- | ||
|id=chr1:174818388..174818392,- | |id=chr1:174818388..174818392,- | ||
|ontology_enrichment_celltype=CL:0000066!2.17e-18!254;CL:0000223!1.61e-14!59;CL:0000082!2.73e-09!19;CL:0000181!4.82e-08!12;CL:0000417!4.82e-08!12;CL:0000668!4.82e-08!12;CL:0000414!4.82e-08!12;CL:0000412!4.82e-08!12;CL:0000182!4.82e-08!12;CL:0002076!7.62e-08!43;CL:0002251!9.76e-08!21 | |ontology_enrichment_celltype=CL:0000066!2.17e-18!254;CL:0000223!1.61e-14!59;CL:0000082!2.73e-09!19;CL:0000181!4.82e-08!12;CL:0000417!4.82e-08!12;CL:0000668!4.82e-08!12;CL:0000414!4.82e-08!12;CL:0000412!4.82e-08!12;CL:0000182!4.82e-08!12;CL:0002076!7.62e-08!43;CL:0002251!9.76e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0000082;1.30e-09;19!CL:0002553;4.34e-09;1!CL:0000167;1.09e-08;1!CL:0000164;1.09e-08;1!CL:0000502;1.09e-08;1!CL:0000172;1.09e-08;1!CL:0000173;1.09e-08;1 | |ontology_enrichment_celltype_v019=CL:0000082;1.30e-09;19!CL:0002553;4.34e-09;1!CL:0000167;1.09e-08;1!CL:0000164;1.09e-08;1!CL:0000502;1.09e-08;1!CL:0000172;1.09e-08;1!CL:0000173;1.09e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.89e-11,253;CL:0000082,9.58e-10,19;CL:0002553,4.19e-09,1;CL:0000167,8.36e-09,1;CL:0000164,8.36e-09,1;CL:0000502,8.36e-09,1;CL:0000172,8.36e-09,1;CL:0000173,8.36e-09,1;CL:0002351,8.36e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0001041;9.02e-15;30!UBERON:0003124;3.06e-09;1!CL:0002351;1.09e-08;1 | |ontology_enrichment_development_v019=UBERON:0001041;9.02e-15;30!UBERON:0003124;3.06e-09;1!CL:0002351;1.09e-08;1 | ||
|ontology_enrichment_disease=DOID:305!4.11e-44!106;DOID:0050687!1.78e-31!143;DOID:162!5.08e-20!235;DOID:14566!3.64e-19!239;DOID:1749!1.09e-17!14;DOID:0050615!7.51e-14!16;DOID:1324!1.45e-12!15;DOID:3119!1.42e-08!14;DOID:299!5.20e-07!25;DOID:3905!8.90e-07!9 | |ontology_enrichment_disease=DOID:305!4.11e-44!106;DOID:0050687!1.78e-31!143;DOID:162!5.08e-20!235;DOID:14566!3.64e-19!239;DOID:1749!1.09e-17!14;DOID:0050615!7.51e-14!16;DOID:1324!1.45e-12!15;DOID:3119!1.42e-08!14;DOID:299!5.20e-07!25;DOID:3905!8.90e-07!9 | ||
|ontology_enrichment_disease_v019=DOID:1324;3.19e-12;15!DOID:0050615;1.90e-11;16!DOID:4556;9.33e-11;3!DOID:305;1.19e-10;106!DOID:5662;1.09e-08;1!DOID:4430;1.09e-08;1!DOID:3905;6.76e-08;9!DOID:3908;8.65e-07;5 | |ontology_enrichment_disease_v019=DOID:1324;3.19e-12;15!DOID:0050615;1.90e-11;16!DOID:4556;9.33e-11;3!DOID:305;1.19e-10;106!DOID:5662;1.09e-08;1!DOID:4430;1.09e-08;1!DOID:3905;6.76e-08;9!DOID:3908;8.65e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.10e-21,106;DOID:0050687,4.82e-17,143;DOID:1324,2.15e-12,15;DOID:0050615,1.31e-11,16;DOID:4556,7.67e-11,3;DOID:162,4.88e-10,235;DOID:14566,9.50e-10,239;DOID:4430,8.36e-09,1;DOID:5662,1.13e-08,1;DOID:3905,5.53e-08,9;DOID:3908,7.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0005911!6.10e-17!82;UBERON:0004119!9.14e-15!169;UBERON:0000925!9.14e-15!169;UBERON:0006595!9.14e-15!169;UBERON:0000077!3.07e-14!130;UBERON:0004921!3.37e-14!129;UBERON:0004185!3.37e-14!129;UBERON:0001007!3.86e-14!155;UBERON:0001555!3.86e-14!155;UBERON:0007026!3.86e-14!155;UBERON:0001041!2.68e-11!98;UBERON:0004802!2.73e-09!19;UBERON:0000115!2.73e-09!19;UBERON:0002048!5.89e-09!22;UBERON:0000117!5.89e-09!22;UBERON:0000171!5.89e-09!22;UBERON:0000170!5.89e-09!22;UBERON:0005597!5.89e-09!22;UBERON:0000118!5.89e-09!22;UBERON:0005153!8.08e-09!37;UBERON:0004807!1.28e-08!28;UBERON:0003929!1.61e-08!54;UBERON:0000466!4.65e-08!126;UBERON:0000949!4.41e-07!45 | |ontology_enrichment_uberon=UBERON:0005911!6.10e-17!82;UBERON:0004119!9.14e-15!169;UBERON:0000925!9.14e-15!169;UBERON:0006595!9.14e-15!169;UBERON:0000077!3.07e-14!130;UBERON:0004921!3.37e-14!129;UBERON:0004185!3.37e-14!129;UBERON:0001007!3.86e-14!155;UBERON:0001555!3.86e-14!155;UBERON:0007026!3.86e-14!155;UBERON:0001041!2.68e-11!98;UBERON:0004802!2.73e-09!19;UBERON:0000115!2.73e-09!19;UBERON:0002048!5.89e-09!22;UBERON:0000117!5.89e-09!22;UBERON:0000171!5.89e-09!22;UBERON:0000170!5.89e-09!22;UBERON:0005597!5.89e-09!22;UBERON:0000118!5.89e-09!22;UBERON:0005153!8.08e-09!37;UBERON:0004807!1.28e-08!28;UBERON:0003929!1.61e-08!54;UBERON:0000466!4.65e-08!126;UBERON:0000949!4.41e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0004802;1.30e-09;19!UBERON:0000115;1.30e-09;19!UBERON:0002048;2.83e-08;22!UBERON:0004807;2.83e-08;22!UBERON:0000117;2.83e-08;22!UBERON:0000171;2.83e-08;22!UBERON:0000170;2.83e-08;22!UBERON:0002423;2.84e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0004802;1.30e-09;19!UBERON:0000115;1.30e-09;19!UBERON:0002048;2.83e-08;22!UBERON:0004807;2.83e-08;22!UBERON:0000117;2.83e-08;22!UBERON:0000171;2.83e-08;22!UBERON:0000170;2.83e-08;22!UBERON:0002423;2.84e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,6.72e-11,82;UBERON:0004802,9.58e-10,19;UBERON:0000115,9.58e-10,19;UBERON:0002048,2.18e-08,22;UBERON:0000117,2.18e-08,22;UBERON:0000171,2.18e-08,22;UBERON:0000170,2.18e-08,22;UBERON:0005597,2.18e-08,22;UBERON:0000118,2.18e-08,22;UBERON:0004921,3.36e-08,118;UBERON:0004119,1.22e-07,160;UBERON:0000925,1.22e-07,160;UBERON:0006595,1.22e-07,160;UBERON:0001007,2.06e-07,145;UBERON:0001555,2.06e-07,145;UBERON:0007026,2.06e-07,145;UBERON:0009497,2.36e-07,25;UBERON:0000015,2.36e-07,25;UBERON:0002423,2.36e-07,25;UBERON:0006235,2.36e-07,25;UBERON:0004161,2.36e-07,25;UBERON:0001041,5.47e-07,87;UBERON:0005153,9.34e-07,37 | |||
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| ||
|short_description=p@chr1:174818388..174818392,- | |short_description=p@chr1:174818388..174818392,- | ||
}} | }} |
Latest revision as of 00:37, 28 July 2015
Short description: | p@chr1:174818388..174818392, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:174818388..174818392, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.89e-11 | 253 |
epithelial cell of lung | 9.58e-10 | 19 |
lung fibroblast | 4.19e-09 | 1 |
peptide hormone secreting cell | 8.36e-09 | 1 |
enteroendocrine cell | 8.36e-09 | 1 |
type D enteroendocrine cell | 8.36e-09 | 1 |
somatostatin secreting cell | 8.36e-09 | 1 |
pancreatic D cell | 8.36e-09 | 1 |
progenitor cell of endocrine pancreas | 8.36e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 6.72e-11 | 82 |
respiratory tract epithelium | 9.58e-10 | 19 |
lung epithelium | 9.58e-10 | 19 |
lung | 2.18e-08 | 22 |
respiratory tube | 2.18e-08 | 22 |
respiration organ | 2.18e-08 | 22 |
pair of lungs | 2.18e-08 | 22 |
lung primordium | 2.18e-08 | 22 |
lung bud | 2.18e-08 | 22 |
subdivision of digestive tract | 3.36e-08 | 118 |
endoderm-derived structure | 1.22e-07 | 160 |
endoderm | 1.22e-07 | 160 |
presumptive endoderm | 1.22e-07 | 160 |
digestive system | 2.06e-07 | 145 |
digestive tract | 2.06e-07 | 145 |
primitive gut | 2.06e-07 | 145 |
epithelium of foregut-midgut junction | 2.36e-07 | 25 |
anatomical boundary | 2.36e-07 | 25 |
hepatobiliary system | 2.36e-07 | 25 |
foregut-midgut junction | 2.36e-07 | 25 |
septum transversum | 2.36e-07 | 25 |
foregut | 5.47e-07 | 87 |
epithelial bud | 9.34e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.10e-21 | 106 |
cell type cancer | 4.82e-17 | 143 |
lung cancer | 2.15e-12 | 15 |
respiratory system cancer | 1.31e-11 | 16 |
lung large cell carcinoma | 7.67e-11 | 3 |
cancer | 4.88e-10 | 235 |
disease of cellular proliferation | 9.50e-10 | 239 |
somatostatinoma | 8.36e-09 | 1 |
pleomorphic carcinoma | 1.13e-08 | 1 |
lung carcinoma | 5.53e-08 | 9 |
non-small cell lung carcinoma | 7.70e-07 | 5 |