FFCP PHASE1:Hg19::chr1:20302285..20302297,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:20302285..20302297,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr1:20302285..20302297,+ | |description=CAGE_peak_at_chr1:20302285..20302297,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.97e-14;1!CL:0002625;1.97e-14;1!CL:0000216;1.97e-14;1!CL:0000182;8.70e-11;12!CL:0000153;6.04e-07;9!CL:0000447;6.04e-07;9 | |ontology_enrichment_celltype_v019=CL:0000511;1.97e-14;1!CL:0002625;1.97e-14;1!CL:0000216;1.97e-14;1!CL:0000182;8.70e-11;12!CL:0000153;6.04e-07;9!CL:0000447;6.04e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.23e-14,1;CL:0002625,1.23e-14,1;CL:0000216,1.23e-14,1;CL:0000182,8.42e-11,12;CL:0000153,6.04e-07,9;CL:0000447,6.04e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.97e-14;1!UBERON:0010115;1.97e-14;1 | |ontology_enrichment_development_v019=UBERON:0010226;1.97e-14;1!UBERON:0010115;1.97e-14;1 | ||
|ontology_enrichment_disease=DOID:114!2.87e-09!2 | |ontology_enrichment_disease=DOID:114!2.87e-09!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.28e-24!115;UBERON:0004151!1.82e-13!3;UBERON:0002133!1.41e-09!2;UBERON:0002081!1.67e-09!2;UBERON:0001630!2.75e-09!2;UBERON:0005090!2.75e-09!2;UBERON:0003127!5.10e-09!2;UBERON:0007100!1.41e-08!27;UBERON:0003103!3.69e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!2.28e-24!115;UBERON:0004151!1.82e-13!3;UBERON:0002133!1.41e-09!2;UBERON:0002081!1.67e-09!2;UBERON:0001630!2.75e-09!2;UBERON:0005090!2.75e-09!2;UBERON:0003127!5.10e-09!2;UBERON:0007100!1.41e-08!27;UBERON:0003103!3.69e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.12e-18;3!UBERON:0000996;9.36e-15;1!UBERON:0002363;1.97e-14;1!UBERON:0002084;1.97e-14;1!UBERON:0002134;1.97e-14;1!UBERON:0001136;1.97e-14;1!UBERON:0001343;1.97e-14;1!UBERON:0002082;1.97e-14;1!UBERON:0005208;1.97e-14;1!UBERON:0004910;1.97e-14;1!UBERON:0004145;1.97e-14;1!UBERON:0005946;1.97e-14;1!UBERON:0004813;1.97e-14;1!UBERON:0005965;1.97e-14;1!UBERON:0002078;1.97e-14;1!UBERON:0002107;1.13e-11;19!UBERON:0006925;1.13e-11;19!UBERON:0002423;6.31e-09;25!UBERON:0002360;7.27e-08;2!UBERON:0002081;7.27e-08;2!UBERON:0002133;7.27e-08;2!UBERON:0000094;7.27e-08;2!UBERON:0004909;7.27e-08;2!UBERON:0010743;7.27e-08;2!UBERON:0002365;1.80e-07;31!UBERON:0002330;1.80e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0004151;2.12e-18;3!UBERON:0000996;9.36e-15;1!UBERON:0002363;1.97e-14;1!UBERON:0002084;1.97e-14;1!UBERON:0002134;1.97e-14;1!UBERON:0001136;1.97e-14;1!UBERON:0001343;1.97e-14;1!UBERON:0002082;1.97e-14;1!UBERON:0005208;1.97e-14;1!UBERON:0004910;1.97e-14;1!UBERON:0004145;1.97e-14;1!UBERON:0005946;1.97e-14;1!UBERON:0004813;1.97e-14;1!UBERON:0005965;1.97e-14;1!UBERON:0002078;1.97e-14;1!UBERON:0002107;1.13e-11;19!UBERON:0006925;1.13e-11;19!UBERON:0002423;6.31e-09;25!UBERON:0002360;7.27e-08;2!UBERON:0002081;7.27e-08;2!UBERON:0002133;7.27e-08;2!UBERON:0000094;7.27e-08;2!UBERON:0004909;7.27e-08;2!UBERON:0010743;7.27e-08;2!UBERON:0002365;1.80e-07;31!UBERON:0002330;1.80e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.12e-18,3;UBERON:0000996,9.36e-15,1;UBERON:0001136,1.23e-14,1;UBERON:0001343,1.23e-14,1;UBERON:0004910,1.23e-14,1;UBERON:0005154,1.23e-14,1;UBERON:0005295,1.23e-14,1;UBERON:0004813,1.23e-14,1;UBERON:0005297,1.23e-14,1;UBERON:0005294,1.23e-14,1;UBERON:0010141,1.23e-14,1;UBERON:0005891,1.23e-14,1;UBERON:0002134,1.61e-14,1;UBERON:0005208,1.61e-14,1;UBERON:0005946,1.61e-14,1;UBERON:0005965,1.61e-14,1;UBERON:0002078,1.61e-14,1;UBERON:0002363,2.11e-14,1;UBERON:0007645,2.11e-14,1;UBERON:0007647,2.11e-14,1;UBERON:0010115,2.11e-14,1;UBERON:0002084,2.41e-14,1;UBERON:0002082,2.41e-14,1;UBERON:0010226,2.41e-14,1;UBERON:0002107,1.13e-11,19;UBERON:0006925,1.13e-11,19;UBERON:0008836,1.13e-11,19;UBERON:0008835,4.10e-10,22;UBERON:0003894,4.10e-10,22;UBERON:0009854,1.10e-09,23;UBERON:0007499,6.31e-09,25;UBERON:0009497,6.31e-09,25;UBERON:0000015,6.31e-09,25;UBERON:0002423,6.31e-09,25;UBERON:0006235,6.31e-09,25;UBERON:0004161,6.31e-09,25;UBERON:0009856,1.37e-08,26;UBERON:0004909,5.74e-08,2;UBERON:0002081,6.58e-08,2;UBERON:0002133,6.58e-08,2;UBERON:0010227,6.58e-08,2;UBERON:0002360,7.52e-08,2;UBERON:0000094,7.52e-08,2;UBERON:0010743,7.52e-08,2;UBERON:0002365,3.10e-07,31;UBERON:0002330,3.10e-07,31 | |||
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| ||
|short_description=p@chr1:20302285..20302297,+ | |short_description=p@chr1:20302285..20302297,+ | ||
}} | }} |
Latest revision as of 02:22, 28 July 2015
Short description: | p@chr1:20302285..20302297, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:20302285..20302297, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.23e-14 | 1 |
seminiferous tubule epithelial cell | 1.23e-14 | 1 |
Sertoli cell | 1.23e-14 | 1 |
hepatocyte | 8.42e-11 | 12 |
GAG secreting cell | 6.04e-07 | 9 |
carbohydrate secreting cell | 6.04e-07 | 9 |