FFCP PHASE1:Hg19::chr11:2320635..2320646,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:2320635..2320646,+ | |||
|coexpression_cluster_id=C1336 | |coexpression_cluster_id=C1336 | ||
|description=CAGE_peak_at_chr11:2320635..2320646,+ | |description=CAGE_peak_at_chr11:2320635..2320646,+ | ||
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|ontology_enrichment_celltype=CL:0000625!1.03e-48!11;CL:0000791!2.62e-34!18;CL:0000789!2.62e-34!18;CL:0002420!2.62e-34!18;CL:0002419!2.62e-34!18;CL:0000790!2.62e-34!18;CL:0000084!6.08e-24!25;CL:0000827!6.08e-24!25;CL:0000838!1.63e-23!52;CL:0000542!5.46e-23!53;CL:0000051!5.46e-23!53;CL:0000842!3.02e-14!3;CL:0002087!5.37e-14!119;CL:0000738!2.80e-12!140;CL:0000224!8.47e-11!4;CL:0002031!2.18e-09!124;CL:0002253!3.50e-09!2;CL:0000037!5.40e-09!172;CL:0000566!5.40e-09!172;CL:0000988!3.28e-08!182;CL:0000080!2.49e-07!6;CL:0002032!9.11e-07!165;CL:0000837!9.11e-07!165 | |ontology_enrichment_celltype=CL:0000625!1.03e-48!11;CL:0000791!2.62e-34!18;CL:0000789!2.62e-34!18;CL:0002420!2.62e-34!18;CL:0002419!2.62e-34!18;CL:0000790!2.62e-34!18;CL:0000084!6.08e-24!25;CL:0000827!6.08e-24!25;CL:0000838!1.63e-23!52;CL:0000542!5.46e-23!53;CL:0000051!5.46e-23!53;CL:0000842!3.02e-14!3;CL:0002087!5.37e-14!119;CL:0000738!2.80e-12!140;CL:0000224!8.47e-11!4;CL:0002031!2.18e-09!124;CL:0002253!3.50e-09!2;CL:0000037!5.40e-09!172;CL:0000566!5.40e-09!172;CL:0000988!3.28e-08!182;CL:0000080!2.49e-07!6;CL:0002032!9.11e-07!165;CL:0000837!9.11e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000625;9.09e-86;11!CL:0000791;1.17e-62;18!CL:0000789;1.17e-62;18!CL:0002419;1.17e-62;18!CL:0000084;1.07e-44;25!CL:0000226;6.27e-29;3!CL:0000842;6.27e-29;3!CL:0000542;3.73e-11;53 | |ontology_enrichment_celltype_v019=CL:0000625;9.09e-86;11!CL:0000791;1.17e-62;18!CL:0000789;1.17e-62;18!CL:0002419;1.17e-62;18!CL:0000084;1.07e-44;25!CL:0000226;6.27e-29;3!CL:0000842;6.27e-29;3!CL:0000542;3.73e-11;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.42e-86,11;CL:0000791,1.07e-62,18;CL:0000789,1.07e-62,18;CL:0002420,1.07e-62,18;CL:0002419,1.07e-62,18;CL:0000790,1.07e-62,18;CL:0000084,1.01e-44,25;CL:0000827,1.01e-44,25;CL:0000226,9.20e-29,3;CL:0000842,9.20e-29,3;CL:0000838,1.12e-20,52;CL:0000542,2.96e-20,53;CL:0000051,2.96e-20,53;CL:0002087,6.49e-14,115;CL:0000738,1.97e-11,136;CL:0000037,7.85e-09,168;CL:0000988,2.88e-08,177;CL:0002031,6.41e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.17e-62;18!CL:0000051;3.73e-11;53 | |ontology_enrichment_development_v019=CL:0000790;1.17e-62;18!CL:0000051;3.73e-11;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.11e-17!15;UBERON:0000179!1.11e-17!15;UBERON:0000463!1.11e-17!15;UBERON:0004907!5.97e-08!5 | |ontology_enrichment_uberon=UBERON:0000178!1.11e-17!15;UBERON:0000179!1.11e-17!15;UBERON:0000463!1.11e-17!15;UBERON:0004907!5.97e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.43e-22;15!UBERON:0000179;4.43e-22;15!UBERON:0000463;4.43e-22;15!UBERON:0000029;5.30e-11;1!UBERON:0002390;1.53e-10;32!UBERON:0002193;2.98e-08;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.43e-22;15!UBERON:0000179;4.43e-22;15!UBERON:0000463;4.43e-22;15!UBERON:0000029;5.30e-11;1!UBERON:0002390;1.53e-10;32!UBERON:0002193;2.98e-08;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.05e-22,15;UBERON:0000179,5.05e-22,15;UBERON:0000463,5.05e-22,15;UBERON:0000029,4.58e-11,1 | |||
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|short_description=p@chr11:2320635..2320646,+ | |short_description=p@chr11:2320635..2320646,+ | ||
}} | }} |
Latest revision as of 21:09, 23 July 2015
Short description: | p@chr11:2320635..2320646, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2320635..2320646, + |
Coexpression cluster: | C1336_CD8_Natural_Pericytes_Peripheral_medulla_thyroid_ductus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 6.42e-86 | 11 |
mature alpha-beta T cell | 1.07e-62 | 18 |
alpha-beta T cell | 1.07e-62 | 18 |
immature T cell | 1.07e-62 | 18 |
mature T cell | 1.07e-62 | 18 |
immature alpha-beta T cell | 1.07e-62 | 18 |
T cell | 1.01e-44 | 25 |
pro-T cell | 1.01e-44 | 25 |
single nucleate cell | 9.20e-29 | 3 |
mononuclear cell | 9.20e-29 | 3 |
lymphoid lineage restricted progenitor cell | 1.12e-20 | 52 |
lymphocyte | 2.96e-20 | 53 |
common lymphoid progenitor | 2.96e-20 | 53 |
nongranular leukocyte | 6.49e-14 | 115 |
leukocyte | 1.97e-11 | 136 |
hematopoietic stem cell | 7.85e-09 | 168 |
hematopoietic cell | 2.88e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 6.41e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 5.05e-22 | 15 |
haemolymphatic fluid | 5.05e-22 | 15 |
organism substance | 5.05e-22 | 15 |
lymph node | 4.58e-11 | 1 |