FFCP PHASE1:Hg19::chr4:77177483..77177500,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:77177483..77177500,+ | |||
|coexpression_cluster_id=C400 | |coexpression_cluster_id=C400 | ||
|description=CAGE_peak_at_chr4:77177483..77177500,+ | |description=CAGE_peak_at_chr4:77177483..77177500,+ | ||
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|ontology_enrichment_celltype=CL:0000764!2.19e-16!2;CL:0000765!2.19e-16!2;CL:0000050!2.19e-16!2;CL:0000038!2.19e-16!2;CL:0000558!2.19e-16!2;CL:0000547!2.19e-16!2;CL:0000549!2.19e-16!2;CL:0000550!2.19e-16!2;CL:0000552!2.19e-16!2;CL:0000763!8.32e-15!112;CL:0000049!8.32e-15!112;CL:0002032!1.74e-10!165;CL:0000837!1.74e-10!165;CL:0000037!6.20e-10!172;CL:0000566!6.20e-10!172;CL:0000988!3.23e-09!182;CL:0002127!5.31e-09!1;CL:0000914!5.31e-09!1;CL:0000911!5.31e-09!1;CL:0000814!5.31e-09!1;CL:0002042!5.31e-09!1;CL:0002039!5.31e-09!1;CL:0002040!5.31e-09!1;CL:0002041!5.31e-09!1 | |ontology_enrichment_celltype=CL:0000764!2.19e-16!2;CL:0000765!2.19e-16!2;CL:0000050!2.19e-16!2;CL:0000038!2.19e-16!2;CL:0000558!2.19e-16!2;CL:0000547!2.19e-16!2;CL:0000549!2.19e-16!2;CL:0000550!2.19e-16!2;CL:0000552!2.19e-16!2;CL:0000763!8.32e-15!112;CL:0000049!8.32e-15!112;CL:0002032!1.74e-10!165;CL:0000837!1.74e-10!165;CL:0000037!6.20e-10!172;CL:0000566!6.20e-10!172;CL:0000988!3.23e-09!182;CL:0002127!5.31e-09!1;CL:0000914!5.31e-09!1;CL:0000911!5.31e-09!1;CL:0000814!5.31e-09!1;CL:0002042!5.31e-09!1;CL:0002039!5.31e-09!1;CL:0002040!5.31e-09!1;CL:0002041!5.31e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0000763;4.50e-09;100 | |ontology_enrichment_celltype_v019=CL:0000763;4.50e-09;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177 | |||
|ontology_enrichment_development_v019=CL:0000049;9.00e-09;108 | |ontology_enrichment_development_v019=CL:0000049;9.00e-09;108 | ||
|ontology_enrichment_disease=DOID:8692!3.94e-47!31;DOID:1240!1.72e-42!39;DOID:1036!6.91e-35!8;DOID:2531!7.40e-32!51;DOID:0060083!7.40e-32!51;DOID:0050686!5.06e-10!137;DOID:8552!7.27e-09!1 | |ontology_enrichment_disease=DOID:8692!3.94e-47!31;DOID:1240!1.72e-42!39;DOID:1036!6.91e-35!8;DOID:2531!7.40e-32!51;DOID:0060083!7.40e-32!51;DOID:0050686!5.06e-10!137;DOID:8552!7.27e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.50e-66;31!DOID:1036;9.44e-56;8!DOID:1240;2.28e-46;39!DOID:2531;1.48e-29;51!DOID:0060083;1.48e-29;51 | |ontology_enrichment_disease_v019=DOID:8692;1.50e-66;31!DOID:1036;9.44e-56;8!DOID:1240;2.28e-46;39!DOID:2531;1.48e-29;51!DOID:0060083;1.48e-29;51 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,3.23e-69,31;DOID:1036,1.00e-55,8;DOID:1240,5.86e-55,39;DOID:2531,6.07e-42,51;DOID:0060083,6.07e-42,51;DOID:0050686,3.63e-15,137;DOID:162,1.45e-08,235;DOID:14566,2.27e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.21e-17!4;UBERON:0005058!2.21e-17!4;UBERON:0009113!2.21e-17!4;UBERON:0003295!2.21e-17!4;UBERON:0005562!2.21e-17!4;UBERON:0003351!8.77e-12!6;UBERON:0004177!3.55e-10!7;UBERON:0001301!6.72e-09!1;UBERON:0002336!1.07e-08!1;UBERON:0001018!1.07e-08!1;UBERON:0002473!1.07e-08!1;UBERON:0005340!1.07e-08!1;UBERON:0002316!1.07e-08!1;UBERON:0003544!1.07e-08!1;UBERON:0001020!1.07e-08!1;UBERON:0005970!1.07e-08!1;UBERON:0002437!1.07e-08!1;UBERON:0000974!2.86e-07!10;UBERON:0003408!2.86e-07!10;UBERON:0001042!2.86e-07!10;UBERON:0009145!2.86e-07!10 | |ontology_enrichment_uberon=UBERON:0002370!2.21e-17!4;UBERON:0005058!2.21e-17!4;UBERON:0009113!2.21e-17!4;UBERON:0003295!2.21e-17!4;UBERON:0005562!2.21e-17!4;UBERON:0003351!8.77e-12!6;UBERON:0004177!3.55e-10!7;UBERON:0001301!6.72e-09!1;UBERON:0002336!1.07e-08!1;UBERON:0001018!1.07e-08!1;UBERON:0002473!1.07e-08!1;UBERON:0005340!1.07e-08!1;UBERON:0002316!1.07e-08!1;UBERON:0003544!1.07e-08!1;UBERON:0001020!1.07e-08!1;UBERON:0005970!1.07e-08!1;UBERON:0002437!1.07e-08!1;UBERON:0000974!2.86e-07!10;UBERON:0003408!2.86e-07!10;UBERON:0001042!2.86e-07!10;UBERON:0009145!2.86e-07!10 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr4:77177483..77177500,+ | |short_description=p@chr4:77177483..77177500,+ | ||
}} | }} |
Latest revision as of 06:58, 30 July 2015
Short description: | p@chr4:77177483..77177500, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:77177483..77177500, + |
Coexpression cluster: | C400_acute_leukemia_chronic_myelodysplastic_NK_pancreas_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.23e-69 | 31 |
chronic leukemia | 1.00e-55 | 8 |
leukemia | 5.86e-55 | 39 |
hematologic cancer | 6.07e-42 | 51 |
immune system cancer | 6.07e-42 | 51 |
organ system cancer | 3.63e-15 | 137 |
cancer | 1.45e-08 | 235 |
disease of cellular proliferation | 2.27e-08 | 239 |