FFCP PHASE1:Hg19::chrX:151306991..151307005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6803 | |HGNC=6803 | ||
|TSSclassifier=strong | |||
|UniProt=P43359 | |UniProt=P43359 | ||
|association_with_transcript=0bp_to_ENST00000509345_5end | |association_with_transcript=0bp_to_ENST00000509345_5end | ||
|cluster_id=chrX:151306991..151307005,- | |||
|coexpression_cluster_id=C4857 | |coexpression_cluster_id=C4857 | ||
|description=CAGE_peak_1_at_MAGEA5_5end | |description=CAGE_peak_1_at_MAGEA5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002149;2.25e-08;6!CL:0002255;2.25e-08;6!CL:1000415;6.61e-07;2!CL:0000054;7.61e-07;2!CL:0000137;7.61e-07;2!CL:0000092;7.61e-07;2 | |ontology_enrichment_celltype_v019=CL:0002149;2.25e-08;6!CL:0002255;2.25e-08;6!CL:1000415;6.61e-07;2!CL:0000054;7.61e-07;2!CL:0000137;7.61e-07;2!CL:0000092;7.61e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.17e-08,6;CL:0002255,2.17e-08,6;CL:1000415,6.80e-07,2;CL:0000054,7.61e-07,2;CL:0000137,7.61e-07,2;CL:0000092,7.61e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.03e-13;1 | |ontology_enrichment_development_v019=UBERON:0003124;7.03e-13;1 | ||
|ontology_enrichment_disease=DOID:0050687!2.08e-09!143;DOID:0060085!3.31e-09!1;DOID:3165!3.31e-09!1;DOID:0060121!3.31e-09!1;DOID:2438!3.31e-09!1;DOID:4418!3.31e-09!1;DOID:5409!9.56e-09!4;DOID:162!2.67e-07!235;DOID:14566!4.44e-07!239 | |ontology_enrichment_disease=DOID:0050687!2.08e-09!143;DOID:0060085!3.31e-09!1;DOID:3165!3.31e-09!1;DOID:0060121!3.31e-09!1;DOID:2438!3.31e-09!1;DOID:4418!3.31e-09!1;DOID:5409!9.56e-09!4;DOID:162!2.67e-07!235;DOID:14566!4.44e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:0060085;1.96e-12;1!DOID:3165;1.96e-12;1!DOID:0060121;1.96e-12;1!DOID:2438;1.96e-12;1!DOID:4418;1.96e-12;1!DOID:1115;3.86e-09;20!DOID:3001;2.25e-08;6!DOID:4468;6.07e-07;2!DOID:200;7.61e-07;2!DOID:4305;7.61e-07;2 | |ontology_enrichment_disease_v019=DOID:0060085;1.96e-12;1!DOID:3165;1.96e-12;1!DOID:0060121;1.96e-12;1!DOID:2438;1.96e-12;1!DOID:4418;1.96e-12;1!DOID:1115;3.86e-09;20!DOID:3001;2.25e-08;6!DOID:4468;6.07e-07;2!DOID:200;7.61e-07;2!DOID:4305;7.61e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.96e-12,1;DOID:3165,1.96e-12,1;DOID:0060121,1.96e-12,1;DOID:2438,1.96e-12,1;DOID:4418,1.96e-12,1;DOID:1115,3.86e-09,20;DOID:3001,2.17e-08,6;DOID:0050687,7.38e-08,143;DOID:4468,6.07e-07,2;DOID:200,7.61e-07,2;DOID:4305,7.61e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p1@MAGEA5 | |short_description=p1@MAGEA5 | ||
}} | }} |
Latest revision as of 22:48, 19 September 2015
Short description: | p1@MAGEA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAGEA5_5end |
Coexpression cluster: | C4857_endometrial_small_clear_liposarcoma_transitionalcell_lymphangiectasia_adrenal |
Association with transcript: | 0bp_to_ENST00000509345_5end |
EntrezGene: | NA |
HGNC: | 6803 |
UniProt: | P43359 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.17e-08 | 6 |
stromal cell of endometrium | 2.17e-08 | 6 |
epithelial cell of gall bladder | 6.80e-07 | 2 |
bone matrix secreting cell | 7.61e-07 | 2 |
osteocyte | 7.61e-07 | 2 |
osteoclast | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.96e-12 | 1 |
skin benign neoplasm | 1.96e-12 | 1 |
integumentary system benign neoplasm | 1.96e-12 | 1 |
dermis tumor | 1.96e-12 | 1 |
cutaneous fibrous histiocytoma | 1.96e-12 | 1 |
sarcoma | 3.86e-09 | 20 |
female reproductive endometrioid cancer | 2.17e-08 | 6 |
cell type cancer | 7.38e-08 | 143 |
clear cell adenocarcinoma | 6.07e-07 | 2 |
giant cell tumor | 7.61e-07 | 2 |
bone giant cell tumor | 7.61e-07 | 2 |